Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Trbv29A0A0G2LB96 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv29A0A0G2LB96 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv29A0A0G2LB96 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv29A0A0G2LB96 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv29A0A0G2LB96 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv29A0A0G2LB96 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv29A0A0G2LB96 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv29A0A0G2LB96 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv29A0A0G2LB96 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv29A0A0G2LB96 Gm7291-201ENSMUST00000199147 382 ntBASIC14.49□□□□□ -0.09
Trbv29A0A0G2LB96 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC14.49□□□□□ -0.09
Trbv29A0A0G2LB96 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC14.49□□□□□ -0.09
Trbv29A0A0G2LB96 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv29A0A0G2LB96 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv29A0A0G2LB96 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trbv29A0A0G2LB96 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv29A0A0G2LB96 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv29A0A0G2LB96 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv29A0A0G2LB96 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv29A0A0G2LB96 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC14.48□□□□□ -0.09
Trbv29A0A0G2LB96 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv29A0A0G2LB96 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Trbv29A0A0G2LB96 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv29A0A0G2LB96 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv29A0A0G2LB96 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv29A0A0G2LB96 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv29A0A0G2LB96 Gm7290-201ENSMUST00000104990 617 ntBASIC14.48□□□□□ -0.09
Trbv29A0A0G2LB96 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC14.48□□□□□ -0.09
Trbv29A0A0G2LB96 Gm12918-201ENSMUST00000120234 636 ntBASIC14.48□□□□□ -0.09
Trbv29A0A0G2LB96 Gm15710-201ENSMUST00000121821 636 ntBASIC14.48□□□□□ -0.09
Trbv29A0A0G2LB96 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv29A0A0G2LB96 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC14.48□□□□□ -0.09
Trbv29A0A0G2LB96 Gm5075-201ENSMUST00000196916 622 ntBASIC14.48□□□□□ -0.09
Trbv29A0A0G2LB96 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv29A0A0G2LB96 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC14.48□□□□□ -0.09
Trbv29A0A0G2LB96 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC14.48□□□□□ -0.09
Trbv29A0A0G2LB96 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv29A0A0G2LB96 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv29A0A0G2LB96 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trbv29A0A0G2LB96 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trbv29A0A0G2LB96 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC14.48□□□□□ -0.09
Trbv29A0A0G2LB96 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv29A0A0G2LB96 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv29A0A0G2LB96 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv29A0A0G2LB96 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
Trbv29A0A0G2LB96 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv29A0A0G2LB96 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv29A0A0G2LB96 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv29A0A0G2LB96 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv29A0A0G2LB96 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC14.47□□□□□ -0.09
Trbv29A0A0G2LB96 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv29A0A0G2LB96 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC14.47□□□□□ -0.09
Trbv29A0A0G2LB96 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC14.47□□□□□ -0.09
Trbv29A0A0G2LB96 Wnt10b-205ENSMUST00000226846 1204 ntBASIC14.47□□□□□ -0.09
Trbv29A0A0G2LB96 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv29A0A0G2LB96 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv29A0A0G2LB96 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv29A0A0G2LB96 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv29A0A0G2LB96 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv29A0A0G2LB96 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC14.47□□□□□ -0.09
Trbv29A0A0G2LB96 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv29A0A0G2LB96 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv29A0A0G2LB96 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv29A0A0G2LB96 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv29A0A0G2LB96 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv29A0A0G2LB96 Gm16401-202ENSMUST00000197463 2074 ntBASIC14.46□□□□□ -0.09
Trbv29A0A0G2LB96 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv29A0A0G2LB96 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv29A0A0G2LB96 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv29A0A0G2LB96 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv29A0A0G2LB96 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv29A0A0G2LB96 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv29A0A0G2LB96 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv29A0A0G2LB96 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Trbv29A0A0G2LB96 Gm6211-202ENSMUST00000167849 925 ntBASIC14.46□□□□□ -0.09
Trbv29A0A0G2LB96 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC14.46□□□□□ -0.09
Trbv29A0A0G2LB96 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC14.46□□□□□ -0.09
Trbv29A0A0G2LB96 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Trbv29A0A0G2LB96 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv29A0A0G2LB96 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Trbv29A0A0G2LB96 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv29A0A0G2LB96 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv29A0A0G2LB96 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv29A0A0G2LB96 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trbv29A0A0G2LB96 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trbv29A0A0G2LB96 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
Trbv29A0A0G2LB96 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv29A0A0G2LB96 Gm37820-201ENSMUST00000194021 2147 ntBASIC14.45□□□□□ -0.1
Trbv29A0A0G2LB96 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC14.45□□□□□ -0.1
Trbv29A0A0G2LB96 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv29A0A0G2LB96 Flg-201ENSMUST00000050758 1488 ntBASIC14.45□□□□□ -0.1
Trbv29A0A0G2LB96 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trbv29A0A0G2LB96 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv29A0A0G2LB96 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv29A0A0G2LB96 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC14.45□□□□□ -0.1
Trbv29A0A0G2LB96 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv29A0A0G2LB96 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC14.45□□□□□ -0.1
Trbv29A0A0G2LB96 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv29A0A0G2LB96 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms