Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Mir6349-201ENSMUST00000184059 97 ntBASIC15.3■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC15.3■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC15.29■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm11643-201ENSMUST00000119578 864 ntBASIC15.29■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm12933-201ENSMUST00000120203 872 ntBASIC15.29■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC15.29■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm44672-201ENSMUST00000206944 1098 ntBASIC15.29■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.29■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm10654-201ENSMUST00000098653 1633 ntBASIC15.28■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC15.28■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC15.28■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC15.28■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm10138-203ENSMUST00000206952 366 ntBASIC15.28■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.28■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC15.28■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC15.28■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC15.27■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC15.27■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC15.27■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Trav15d-2-dv6d-2A0A0G2JGQ7 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm43548-201ENSMUST00000197139 2353 ntBASIC15.26■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm5408-201ENSMUST00000197998 747 ntBASIC15.26■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm2559-201ENSMUST00000201323 363 ntBASIC15.26■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm4968-201ENSMUST00000071458 858 ntBASIC15.26■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm37179-201ENSMUST00000194862 823 ntBASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms