Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Gm11249-201ENSMUST00000117071 859 ntBASIC14.14□□□□□ -0.15
Trav13n-4A0A0G2JG01 Gm715-201ENSMUST00000117865 831 ntBASIC14.14□□□□□ -0.15
Trav13n-4A0A0G2JG01 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13n-4A0A0G2JG01 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13n-4A0A0G2JG01 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC14.14□□□□□ -0.15
Trav13n-4A0A0G2JG01 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13n-4A0A0G2JG01 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Trav13n-4A0A0G2JG01 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Trav13n-4A0A0G2JG01 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13n-4A0A0G2JG01 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trav13n-4A0A0G2JG01 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13n-4A0A0G2JG01 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13n-4A0A0G2JG01 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13n-4A0A0G2JG01 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13n-4A0A0G2JG01 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13n-4A0A0G2JG01 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trav13n-4A0A0G2JG01 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13n-4A0A0G2JG01 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13n-4A0A0G2JG01 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13n-4A0A0G2JG01 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Trav13n-4A0A0G2JG01 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13n-4A0A0G2JG01 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13n-4A0A0G2JG01 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13n-4A0A0G2JG01 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13n-4A0A0G2JG01 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trav13n-4A0A0G2JG01 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC14.13□□□□□ -0.15
Trav13n-4A0A0G2JG01 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Trav13n-4A0A0G2JG01 AL672049.1-201ENSMUST00000197943 91 ntBASIC14.13□□□□□ -0.15
Trav13n-4A0A0G2JG01 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC14.13□□□□□ -0.15
Trav13n-4A0A0G2JG01 AC160393.1-201ENSMUST00000218378 1279 ntBASIC14.13□□□□□ -0.15
Trav13n-4A0A0G2JG01 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13n-4A0A0G2JG01 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13n-4A0A0G2JG01 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13n-4A0A0G2JG01 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC14.13□□□□□ -0.15
Trav13n-4A0A0G2JG01 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13n-4A0A0G2JG01 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13n-4A0A0G2JG01 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13n-4A0A0G2JG01 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC14.13□□□□□ -0.15
Trav13n-4A0A0G2JG01 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13n-4A0A0G2JG01 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
Trav13n-4A0A0G2JG01 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13n-4A0A0G2JG01 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13n-4A0A0G2JG01 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13n-4A0A0G2JG01 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13n-4A0A0G2JG01 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Trav13n-4A0A0G2JG01 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13n-4A0A0G2JG01 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13n-4A0A0G2JG01 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC14.12□□□□□ -0.15
Trav13n-4A0A0G2JG01 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13n-4A0A0G2JG01 Gm15847-201ENSMUST00000121417 1065 ntBASIC14.12□□□□□ -0.15
Trav13n-4A0A0G2JG01 Gm15378-201ENSMUST00000121894 207 ntBASIC14.12□□□□□ -0.15
Trav13n-4A0A0G2JG01 Krtap5-1-202ENSMUST00000188274 742 ntBASIC14.12□□□□□ -0.15
Trav13n-4A0A0G2JG01 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Trav13n-4A0A0G2JG01 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13n-4A0A0G2JG01 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13n-4A0A0G2JG01 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13n-4A0A0G2JG01 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13n-4A0A0G2JG01 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13n-4A0A0G2JG01 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC14.12□□□□□ -0.15
Trav13n-4A0A0G2JG01 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.12□□□□□ -0.15
Trav13n-4A0A0G2JG01 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13n-4A0A0G2JG01 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trav13n-4A0A0G2JG01 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trav13n-4A0A0G2JG01 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC14.11□□□□□ -0.15
Trav13n-4A0A0G2JG01 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC14.11□□□□□ -0.15
Trav13n-4A0A0G2JG01 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC14.11□□□□□ -0.15
Trav13n-4A0A0G2JG01 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav13n-4A0A0G2JG01 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC14.11□□□□□ -0.15
Trav13n-4A0A0G2JG01 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trav13n-4A0A0G2JG01 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav13n-4A0A0G2JG01 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav13n-4A0A0G2JG01 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Trav13n-4A0A0G2JG01 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Trav13n-4A0A0G2JG01 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav13n-4A0A0G2JG01 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav13n-4A0A0G2JG01 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav13n-4A0A0G2JG01 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav13n-4A0A0G2JG01 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trav13n-4A0A0G2JG01 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trav13n-4A0A0G2JG01 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav13n-4A0A0G2JG01 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13n-4A0A0G2JG01 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13n-4A0A0G2JG01 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13n-4A0A0G2JG01 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13n-4A0A0G2JG01 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13n-4A0A0G2JG01 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC14.1□□□□□ -0.15
Trav13n-4A0A0G2JG01 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13n-4A0A0G2JG01 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13n-4A0A0G2JG01 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13n-4A0A0G2JG01 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13n-4A0A0G2JG01 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13n-4A0A0G2JG01 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13n-4A0A0G2JG01 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13n-4A0A0G2JG01 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.1□□□□□ -0.15
Trav13n-4A0A0G2JG01 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC14.1□□□□□ -0.15
Trav13n-4A0A0G2JG01 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13n-4A0A0G2JG01 Gm37374-201ENSMUST00000194954 1829 ntBASIC14.1□□□□□ -0.15
Trav13n-4A0A0G2JG01 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13n-4A0A0G2JG01 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13n-4A0A0G2JG01 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms