Protein–RNA interactions for Protein: A0A0B4J1P8

Trbv13-1, T cell receptor beta, variable 13-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-1A0A0B4J1P8 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Gm11927-201ENSMUST00000118472 759 ntBASIC12.99□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Gm43294-201ENSMUST00000202850 2490 ntBASIC12.99□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC12.98□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Gm6598-201ENSMUST00000202719 2615 ntBASIC12.98□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Gm9194-201ENSMUST00000220749 1447 ntBASIC12.98□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC12.98□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Gm15378-201ENSMUST00000121894 207 ntBASIC12.98□□□□□ -0.33
Trbv13-1A0A0B4J1P8 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv13-1A0A0B4J1P8 H2-K2-201ENSMUST00000174250 1049 ntBASIC12.98□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Gm37805-201ENSMUST00000192612 1094 ntBASIC12.98□□□□□ -0.33
Trbv13-1A0A0B4J1P8 AC163280.1-201ENSMUST00000228194 1100 ntBASIC12.98□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv13-1A0A0B4J1P8 AC121961.1-201ENSMUST00000218594 1779 ntBASIC12.98□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv13-1A0A0B4J1P8 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC12.97□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC12.97□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv13-1A0A0B4J1P8 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Gm6576-201ENSMUST00000169678 883 ntBASIC12.97□□□□□ -0.33
Trbv13-1A0A0B4J1P8 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv13-1A0A0B4J1P8 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC12.97□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC12.97□□□□□ -0.33
Trbv13-1A0A0B4J1P8 AC154649.1-201ENSMUST00000227392 384 ntBASIC12.97□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC12.97□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC12.97□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC12.97□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC12.97□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv13-1A0A0B4J1P8 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC12.96□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC12.96□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC12.96□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv13-1A0A0B4J1P8 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trbv13-1A0A0B4J1P8 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms