Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.79■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Igkv5-43A0A0B4J1J2 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Gm13474-201ENSMUST00000122466 815 ntBASIC17.79■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.79■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.79■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.79■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.79■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.78■□□□□ 0.44
Igkv5-43A0A0B4J1J2 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Igkv5-43A0A0B4J1J2 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.78■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.78■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Igkv5-43A0A0B4J1J2 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.77■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.77■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.77■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.76■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Igkv5-43A0A0B4J1J2 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.76■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.76■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.76■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Gm6659-201ENSMUST00000174752 547 ntBASIC17.75■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.75■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.74■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Gm10013-201ENSMUST00000106074 672 ntBASIC17.73■□□□□ 0.43
Igkv5-43A0A0B4J1J2 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms