Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Trbv20A0A0B4J1H5 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv20A0A0B4J1H5 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv20A0A0B4J1H5 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv20A0A0B4J1H5 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC15.65■□□□□ 0.1
Trbv20A0A0B4J1H5 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv20A0A0B4J1H5 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC15.65■□□□□ 0.1
Trbv20A0A0B4J1H5 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv20A0A0B4J1H5 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC15.65■□□□□ 0.1
Trbv20A0A0B4J1H5 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC15.65■□□□□ 0.1
Trbv20A0A0B4J1H5 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv20A0A0B4J1H5 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv20A0A0B4J1H5 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
Trbv20A0A0B4J1H5 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv20A0A0B4J1H5 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv20A0A0B4J1H5 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Trbv20A0A0B4J1H5 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv20A0A0B4J1H5 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv20A0A0B4J1H5 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv20A0A0B4J1H5 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC15.64■□□□□ 0.09
Trbv20A0A0B4J1H5 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv20A0A0B4J1H5 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv20A0A0B4J1H5 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv20A0A0B4J1H5 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
Trbv20A0A0B4J1H5 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv20A0A0B4J1H5 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv20A0A0B4J1H5 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv20A0A0B4J1H5 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Trbv20A0A0B4J1H5 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv20A0A0B4J1H5 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Trbv20A0A0B4J1H5 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv20A0A0B4J1H5 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv20A0A0B4J1H5 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv20A0A0B4J1H5 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv20A0A0B4J1H5 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv20A0A0B4J1H5 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv20A0A0B4J1H5 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv20A0A0B4J1H5 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv20A0A0B4J1H5 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv20A0A0B4J1H5 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv20A0A0B4J1H5 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv20A0A0B4J1H5 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv20A0A0B4J1H5 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Trbv20A0A0B4J1H5 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv20A0A0B4J1H5 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv20A0A0B4J1H5 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv20A0A0B4J1H5 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC15.63■□□□□ 0.09
Trbv20A0A0B4J1H5 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
Trbv20A0A0B4J1H5 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv20A0A0B4J1H5 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv20A0A0B4J1H5 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv20A0A0B4J1H5 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv20A0A0B4J1H5 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv20A0A0B4J1H5 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv20A0A0B4J1H5 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv20A0A0B4J1H5 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Trbv20A0A0B4J1H5 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Trbv20A0A0B4J1H5 AC131586.2-201ENSMUST00000228370 1512 ntBASIC15.63■□□□□ 0.09
Trbv20A0A0B4J1H5 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv20A0A0B4J1H5 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv20A0A0B4J1H5 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv20A0A0B4J1H5 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv20A0A0B4J1H5 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv20A0A0B4J1H5 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv20A0A0B4J1H5 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Trbv20A0A0B4J1H5 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv20A0A0B4J1H5 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv20A0A0B4J1H5 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Trbv20A0A0B4J1H5 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC15.62■□□□□ 0.09
Trbv20A0A0B4J1H5 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv20A0A0B4J1H5 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC15.62■□□□□ 0.09
Trbv20A0A0B4J1H5 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Trbv20A0A0B4J1H5 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv20A0A0B4J1H5 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv20A0A0B4J1H5 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv20A0A0B4J1H5 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv20A0A0B4J1H5 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv20A0A0B4J1H5 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv20A0A0B4J1H5 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv20A0A0B4J1H5 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv20A0A0B4J1H5 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv20A0A0B4J1H5 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv20A0A0B4J1H5 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv20A0A0B4J1H5 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv20A0A0B4J1H5 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.61■□□□□ 0.09
Trbv20A0A0B4J1H5 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv20A0A0B4J1H5 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv20A0A0B4J1H5 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC15.61■□□□□ 0.09
Trbv20A0A0B4J1H5 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Trbv20A0A0B4J1H5 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv20A0A0B4J1H5 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv20A0A0B4J1H5 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
Trbv20A0A0B4J1H5 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv20A0A0B4J1H5 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Trbv20A0A0B4J1H5 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.61■□□□□ 0.09
Trbv20A0A0B4J1H5 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv20A0A0B4J1H5 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv20A0A0B4J1H5 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Trbv20A0A0B4J1H5 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv20A0A0B4J1H5 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms