Protein–RNA interactions for Protein: A0A0B4J1G9

Trbv5, T cell receptor beta, variable 5 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv5A0A0B4J1G9 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv5A0A0B4J1G9 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv5A0A0B4J1G9 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv5A0A0B4J1G9 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC14.06□□□□□ -0.16
Trbv5A0A0B4J1G9 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv5A0A0B4J1G9 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv5A0A0B4J1G9 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv5A0A0B4J1G9 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv5A0A0B4J1G9 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv5A0A0B4J1G9 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv5A0A0B4J1G9 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.05□□□□□ -0.16
Trbv5A0A0B4J1G9 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv5A0A0B4J1G9 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv5A0A0B4J1G9 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv5A0A0B4J1G9 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv5A0A0B4J1G9 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv5A0A0B4J1G9 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv5A0A0B4J1G9 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv5A0A0B4J1G9 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv5A0A0B4J1G9 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Trbv5A0A0B4J1G9 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
Trbv5A0A0B4J1G9 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC14.05□□□□□ -0.16
Trbv5A0A0B4J1G9 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv5A0A0B4J1G9 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
Trbv5A0A0B4J1G9 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv5A0A0B4J1G9 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv5A0A0B4J1G9 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv5A0A0B4J1G9 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv5A0A0B4J1G9 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trbv5A0A0B4J1G9 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv5A0A0B4J1G9 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv5A0A0B4J1G9 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv5A0A0B4J1G9 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.04□□□□□ -0.16
Trbv5A0A0B4J1G9 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trbv5A0A0B4J1G9 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC14.04□□□□□ -0.16
Trbv5A0A0B4J1G9 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv5A0A0B4J1G9 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv5A0A0B4J1G9 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv5A0A0B4J1G9 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv5A0A0B4J1G9 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trbv5A0A0B4J1G9 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv5A0A0B4J1G9 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv5A0A0B4J1G9 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv5A0A0B4J1G9 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv5A0A0B4J1G9 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv5A0A0B4J1G9 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC14.04□□□□□ -0.16
Trbv5A0A0B4J1G9 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv5A0A0B4J1G9 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.04□□□□□ -0.16
Trbv5A0A0B4J1G9 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trbv5A0A0B4J1G9 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv5A0A0B4J1G9 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv5A0A0B4J1G9 CT010478.1-201ENSMUST00000220747 2787 ntBASIC14.04□□□□□ -0.16
Trbv5A0A0B4J1G9 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trbv5A0A0B4J1G9 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv5A0A0B4J1G9 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv5A0A0B4J1G9 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC14.04□□□□□ -0.16
Trbv5A0A0B4J1G9 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Trbv5A0A0B4J1G9 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trbv5A0A0B4J1G9 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv5A0A0B4J1G9 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Trbv5A0A0B4J1G9 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv5A0A0B4J1G9 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv5A0A0B4J1G9 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv5A0A0B4J1G9 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv5A0A0B4J1G9 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv5A0A0B4J1G9 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv5A0A0B4J1G9 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC14.03□□□□□ -0.16
Trbv5A0A0B4J1G9 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv5A0A0B4J1G9 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv5A0A0B4J1G9 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv5A0A0B4J1G9 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv5A0A0B4J1G9 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv5A0A0B4J1G9 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv5A0A0B4J1G9 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv5A0A0B4J1G9 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv5A0A0B4J1G9 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv5A0A0B4J1G9 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Trbv5A0A0B4J1G9 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Trbv5A0A0B4J1G9 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trbv5A0A0B4J1G9 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trbv5A0A0B4J1G9 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trbv5A0A0B4J1G9 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trbv5A0A0B4J1G9 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Trbv5A0A0B4J1G9 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trbv5A0A0B4J1G9 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
Trbv5A0A0B4J1G9 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trbv5A0A0B4J1G9 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trbv5A0A0B4J1G9 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trbv5A0A0B4J1G9 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv5A0A0B4J1G9 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv5A0A0B4J1G9 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv5A0A0B4J1G9 Gm13216-201ENSMUST00000117145 591 ntBASIC14.02□□□□□ -0.17
Trbv5A0A0B4J1G9 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Trbv5A0A0B4J1G9 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv5A0A0B4J1G9 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv5A0A0B4J1G9 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC14.02□□□□□ -0.17
Trbv5A0A0B4J1G9 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv5A0A0B4J1G9 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv5A0A0B4J1G9 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv5A0A0B4J1G9 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms