Protein–RNA interactions for Protein: A0A0B4J1F6

BC053393, cDNA sequence BC053393, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC053393A0A0B4J1F6 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
BC053393A0A0B4J1F6 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC13.96□□□□□ -0.17
BC053393A0A0B4J1F6 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
BC053393A0A0B4J1F6 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
BC053393A0A0B4J1F6 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
BC053393A0A0B4J1F6 Gm44544-201ENSMUST00000207052 1844 ntBASIC13.96□□□□□ -0.17
BC053393A0A0B4J1F6 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
BC053393A0A0B4J1F6 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
BC053393A0A0B4J1F6 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
BC053393A0A0B4J1F6 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
BC053393A0A0B4J1F6 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
BC053393A0A0B4J1F6 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
BC053393A0A0B4J1F6 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
BC053393A0A0B4J1F6 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
BC053393A0A0B4J1F6 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
BC053393A0A0B4J1F6 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
BC053393A0A0B4J1F6 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
BC053393A0A0B4J1F6 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
BC053393A0A0B4J1F6 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
BC053393A0A0B4J1F6 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC13.95□□□□□ -0.18
BC053393A0A0B4J1F6 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC13.95□□□□□ -0.18
BC053393A0A0B4J1F6 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
BC053393A0A0B4J1F6 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC13.95□□□□□ -0.18
BC053393A0A0B4J1F6 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
BC053393A0A0B4J1F6 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC13.95□□□□□ -0.18
BC053393A0A0B4J1F6 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC13.95□□□□□ -0.18
BC053393A0A0B4J1F6 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
BC053393A0A0B4J1F6 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
BC053393A0A0B4J1F6 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
BC053393A0A0B4J1F6 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
BC053393A0A0B4J1F6 Gm37563-201ENSMUST00000192580 1513 ntBASIC13.95□□□□□ -0.18
BC053393A0A0B4J1F6 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
BC053393A0A0B4J1F6 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
BC053393A0A0B4J1F6 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
BC053393A0A0B4J1F6 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
BC053393A0A0B4J1F6 Gm16401-202ENSMUST00000197463 2074 ntBASIC13.94□□□□□ -0.18
BC053393A0A0B4J1F6 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
BC053393A0A0B4J1F6 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC13.94□□□□□ -0.18
BC053393A0A0B4J1F6 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
BC053393A0A0B4J1F6 Gm10849-201ENSMUST00000100397 618 ntBASIC13.94□□□□□ -0.18
BC053393A0A0B4J1F6 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
BC053393A0A0B4J1F6 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
BC053393A0A0B4J1F6 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
BC053393A0A0B4J1F6 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
BC053393A0A0B4J1F6 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
BC053393A0A0B4J1F6 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
BC053393A0A0B4J1F6 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
BC053393A0A0B4J1F6 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
BC053393A0A0B4J1F6 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
BC053393A0A0B4J1F6 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
BC053393A0A0B4J1F6 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
BC053393A0A0B4J1F6 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
BC053393A0A0B4J1F6 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
BC053393A0A0B4J1F6 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
BC053393A0A0B4J1F6 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
BC053393A0A0B4J1F6 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
BC053393A0A0B4J1F6 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
BC053393A0A0B4J1F6 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
BC053393A0A0B4J1F6 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
BC053393A0A0B4J1F6 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
BC053393A0A0B4J1F6 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
BC053393A0A0B4J1F6 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC13.93□□□□□ -0.18
BC053393A0A0B4J1F6 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
BC053393A0A0B4J1F6 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC13.93□□□□□ -0.18
BC053393A0A0B4J1F6 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
BC053393A0A0B4J1F6 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
BC053393A0A0B4J1F6 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
BC053393A0A0B4J1F6 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
BC053393A0A0B4J1F6 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
BC053393A0A0B4J1F6 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
BC053393A0A0B4J1F6 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
BC053393A0A0B4J1F6 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
BC053393A0A0B4J1F6 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
BC053393A0A0B4J1F6 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
BC053393A0A0B4J1F6 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
BC053393A0A0B4J1F6 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
BC053393A0A0B4J1F6 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
BC053393A0A0B4J1F6 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
BC053393A0A0B4J1F6 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
BC053393A0A0B4J1F6 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
BC053393A0A0B4J1F6 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BC053393A0A0B4J1F6 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
BC053393A0A0B4J1F6 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
BC053393A0A0B4J1F6 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BC053393A0A0B4J1F6 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
BC053393A0A0B4J1F6 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
BC053393A0A0B4J1F6 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BC053393A0A0B4J1F6 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BC053393A0A0B4J1F6 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
BC053393A0A0B4J1F6 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BC053393A0A0B4J1F6 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
BC053393A0A0B4J1F6 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
BC053393A0A0B4J1F6 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC13.92□□□□□ -0.18
BC053393A0A0B4J1F6 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC13.92□□□□□ -0.18
BC053393A0A0B4J1F6 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
BC053393A0A0B4J1F6 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
BC053393A0A0B4J1F6 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
BC053393A0A0B4J1F6 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BC053393A0A0B4J1F6 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
BC053393A0A0B4J1F6 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms