Protein–RNA interactions for Protein: A0A0A6YWQ1

Trbv23, T cell receptor beta, variable V23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv23A0A0A6YWQ1 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trbv23A0A0A6YWQ1 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trbv23A0A0A6YWQ1 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15□□□□□ -0.01
Trbv23A0A0A6YWQ1 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
Trbv23A0A0A6YWQ1 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Trbv23A0A0A6YWQ1 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trbv23A0A0A6YWQ1 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC15□□□□□ -0.01
Trbv23A0A0A6YWQ1 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trbv23A0A0A6YWQ1 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trbv23A0A0A6YWQ1 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trbv23A0A0A6YWQ1 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trbv23A0A0A6YWQ1 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15□□□□□ -0.01
Trbv23A0A0A6YWQ1 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trbv23A0A0A6YWQ1 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Trbv23A0A0A6YWQ1 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trbv23A0A0A6YWQ1 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trbv23A0A0A6YWQ1 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC15□□□□□ -0.01
Trbv23A0A0A6YWQ1 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv23A0A0A6YWQ1 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Trbv23A0A0A6YWQ1 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv23A0A0A6YWQ1 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv23A0A0A6YWQ1 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv23A0A0A6YWQ1 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv23A0A0A6YWQ1 Gm10849-201ENSMUST00000100397 618 ntBASIC14.99□□□□□ -0.01
Trbv23A0A0A6YWQ1 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC14.99□□□□□ -0.01
Trbv23A0A0A6YWQ1 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv23A0A0A6YWQ1 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv23A0A0A6YWQ1 Nespas-201ENSMUST00000143738 1083 ntBASIC14.99□□□□□ -0.01
Trbv23A0A0A6YWQ1 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC14.99□□□□□ -0.01
Trbv23A0A0A6YWQ1 Gm19094-201ENSMUST00000209791 1246 ntBASIC14.99□□□□□ -0.01
Trbv23A0A0A6YWQ1 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC14.99□□□□□ -0.01
Trbv23A0A0A6YWQ1 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv23A0A0A6YWQ1 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Trbv23A0A0A6YWQ1 AC069562.2-201ENSMUST00000224644 2146 ntBASIC14.99□□□□□ -0.01
Trbv23A0A0A6YWQ1 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv23A0A0A6YWQ1 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv23A0A0A6YWQ1 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv23A0A0A6YWQ1 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv23A0A0A6YWQ1 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv23A0A0A6YWQ1 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv23A0A0A6YWQ1 Gm37374-201ENSMUST00000194954 1829 ntBASIC14.99□□□□□ -0.01
Trbv23A0A0A6YWQ1 Gm10655-201ENSMUST00000098658 1397 ntBASIC14.98□□□□□ -0.01
Trbv23A0A0A6YWQ1 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv23A0A0A6YWQ1 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv23A0A0A6YWQ1 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Trbv23A0A0A6YWQ1 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv23A0A0A6YWQ1 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv23A0A0A6YWQ1 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC14.98□□□□□ -0.01
Trbv23A0A0A6YWQ1 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv23A0A0A6YWQ1 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Trbv23A0A0A6YWQ1 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv23A0A0A6YWQ1 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv23A0A0A6YWQ1 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv23A0A0A6YWQ1 Gm37805-201ENSMUST00000192612 1094 ntBASIC14.98□□□□□ -0.01
Trbv23A0A0A6YWQ1 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC14.98□□□□□ -0.01
Trbv23A0A0A6YWQ1 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv23A0A0A6YWQ1 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv23A0A0A6YWQ1 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Trbv23A0A0A6YWQ1 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv23A0A0A6YWQ1 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv23A0A0A6YWQ1 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv23A0A0A6YWQ1 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Trbv23A0A0A6YWQ1 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.97□□□□□ -0.01
Trbv23A0A0A6YWQ1 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv23A0A0A6YWQ1 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv23A0A0A6YWQ1 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv23A0A0A6YWQ1 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Trbv23A0A0A6YWQ1 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv23A0A0A6YWQ1 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Trbv23A0A0A6YWQ1 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv23A0A0A6YWQ1 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv23A0A0A6YWQ1 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Trbv23A0A0A6YWQ1 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv23A0A0A6YWQ1 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Trbv23A0A0A6YWQ1 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv23A0A0A6YWQ1 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv23A0A0A6YWQ1 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv23A0A0A6YWQ1 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv23A0A0A6YWQ1 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv23A0A0A6YWQ1 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv23A0A0A6YWQ1 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Trbv23A0A0A6YWQ1 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv23A0A0A6YWQ1 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv23A0A0A6YWQ1 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv23A0A0A6YWQ1 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv23A0A0A6YWQ1 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv23A0A0A6YWQ1 Gm10167-201ENSMUST00000150411 1479 ntBASIC14.96□□□□□ -0.01
Trbv23A0A0A6YWQ1 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv23A0A0A6YWQ1 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
Trbv23A0A0A6YWQ1 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv23A0A0A6YWQ1 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Trbv23A0A0A6YWQ1 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC14.96□□□□□ -0.01
Trbv23A0A0A6YWQ1 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC14.96□□□□□ -0.01
Trbv23A0A0A6YWQ1 Gm27405-201ENSMUST00000184201 112 ntBASIC14.96□□□□□ -0.01
Trbv23A0A0A6YWQ1 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Trbv23A0A0A6YWQ1 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv23A0A0A6YWQ1 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv23A0A0A6YWQ1 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv23A0A0A6YWQ1 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv23A0A0A6YWQ1 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms