Protein–RNA interactions for Protein: A0A0A6YW37

Ighv1-9, Immunoglobulin heavy variable V1-9 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-9A0A0A6YW37 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Ighv1-9A0A0A6YW37 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ighv1-9A0A0A6YW37 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ighv1-9A0A0A6YW37 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Ighv1-9A0A0A6YW37 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Ighv1-9A0A0A6YW37 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ighv1-9A0A0A6YW37 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ighv1-9A0A0A6YW37 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ighv1-9A0A0A6YW37 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ighv1-9A0A0A6YW37 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ighv1-9A0A0A6YW37 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ighv1-9A0A0A6YW37 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ighv1-9A0A0A6YW37 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ighv1-9A0A0A6YW37 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ighv1-9A0A0A6YW37 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ighv1-9A0A0A6YW37 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Ighv1-9A0A0A6YW37 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ighv1-9A0A0A6YW37 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Ighv1-9A0A0A6YW37 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Ighv1-9A0A0A6YW37 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Ighv1-9A0A0A6YW37 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv1-9A0A0A6YW37 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv1-9A0A0A6YW37 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv1-9A0A0A6YW37 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC13.14□□□□□ -0.31
Ighv1-9A0A0A6YW37 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv1-9A0A0A6YW37 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv1-9A0A0A6YW37 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC13.14□□□□□ -0.31
Ighv1-9A0A0A6YW37 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv1-9A0A0A6YW37 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv1-9A0A0A6YW37 Gm43548-201ENSMUST00000197139 2353 ntBASIC13.14□□□□□ -0.31
Ighv1-9A0A0A6YW37 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv1-9A0A0A6YW37 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv1-9A0A0A6YW37 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC13.14□□□□□ -0.31
Ighv1-9A0A0A6YW37 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv1-9A0A0A6YW37 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv1-9A0A0A6YW37 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC13.14□□□□□ -0.31
Ighv1-9A0A0A6YW37 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv1-9A0A0A6YW37 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv1-9A0A0A6YW37 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv1-9A0A0A6YW37 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv1-9A0A0A6YW37 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv1-9A0A0A6YW37 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv1-9A0A0A6YW37 Gm43808-201ENSMUST00000202534 2065 ntBASIC13.14□□□□□ -0.31
Ighv1-9A0A0A6YW37 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv1-9A0A0A6YW37 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv1-9A0A0A6YW37 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv1-9A0A0A6YW37 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv1-9A0A0A6YW37 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Ighv1-9A0A0A6YW37 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv1-9A0A0A6YW37 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv1-9A0A0A6YW37 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv1-9A0A0A6YW37 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv1-9A0A0A6YW37 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv1-9A0A0A6YW37 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv1-9A0A0A6YW37 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv1-9A0A0A6YW37 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv1-9A0A0A6YW37 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv1-9A0A0A6YW37 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv1-9A0A0A6YW37 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv1-9A0A0A6YW37 Ddx41-204ENSMUST00000224765 2199 ntBASIC13.13□□□□□ -0.31
Ighv1-9A0A0A6YW37 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv1-9A0A0A6YW37 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv1-9A0A0A6YW37 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC13.13□□□□□ -0.31
Ighv1-9A0A0A6YW37 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv1-9A0A0A6YW37 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv1-9A0A0A6YW37 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Ighv1-9A0A0A6YW37 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC13.13□□□□□ -0.31
Ighv1-9A0A0A6YW37 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Ighv1-9A0A0A6YW37 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv1-9A0A0A6YW37 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv1-9A0A0A6YW37 AC121598.2-201ENSMUST00000228376 2325 ntBASIC13.13□□□□□ -0.31
Ighv1-9A0A0A6YW37 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv1-9A0A0A6YW37 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv1-9A0A0A6YW37 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv1-9A0A0A6YW37 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv1-9A0A0A6YW37 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv1-9A0A0A6YW37 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Ighv1-9A0A0A6YW37 Gm37519-201ENSMUST00000191687 2210 ntBASIC13.12□□□□□ -0.31
Ighv1-9A0A0A6YW37 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv1-9A0A0A6YW37 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv1-9A0A0A6YW37 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv1-9A0A0A6YW37 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv1-9A0A0A6YW37 Gm15847-201ENSMUST00000121417 1065 ntBASIC13.12□□□□□ -0.31
Ighv1-9A0A0A6YW37 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv1-9A0A0A6YW37 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv1-9A0A0A6YW37 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv1-9A0A0A6YW37 Gm15635-204ENSMUST00000208024 2539 ntBASIC13.12□□□□□ -0.31
Ighv1-9A0A0A6YW37 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv1-9A0A0A6YW37 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv1-9A0A0A6YW37 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv1-9A0A0A6YW37 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv1-9A0A0A6YW37 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC13.12□□□□□ -0.31
Ighv1-9A0A0A6YW37 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv1-9A0A0A6YW37 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC13.12□□□□□ -0.31
Ighv1-9A0A0A6YW37 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv1-9A0A0A6YW37 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv1-9A0A0A6YW37 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ighv1-9A0A0A6YW37 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Ighv1-9A0A0A6YW37 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv1-9A0A0A6YW37 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms