Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6-4A0A075B6B4 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC13.44□□□□□ -0.26
Trav6-4A0A075B6B4 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6-4A0A075B6B4 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6-4A0A075B6B4 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6-4A0A075B6B4 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6-4A0A075B6B4 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
Trav6-4A0A075B6B4 Gm10698-201ENSMUST00000182663 604 ntBASIC13.43□□□□□ -0.26
Trav6-4A0A075B6B4 Gm8969-201ENSMUST00000199694 526 ntBASIC13.43□□□□□ -0.26
Trav6-4A0A075B6B4 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6-4A0A075B6B4 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC13.43□□□□□ -0.26
Trav6-4A0A075B6B4 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6-4A0A075B6B4 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6-4A0A075B6B4 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6-4A0A075B6B4 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Trav6-4A0A075B6B4 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6-4A0A075B6B4 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6-4A0A075B6B4 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6-4A0A075B6B4 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6-4A0A075B6B4 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6-4A0A075B6B4 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6-4A0A075B6B4 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6-4A0A075B6B4 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Trav6-4A0A075B6B4 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Trav6-4A0A075B6B4 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6-4A0A075B6B4 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC13.42□□□□□ -0.26
Trav6-4A0A075B6B4 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6-4A0A075B6B4 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6-4A0A075B6B4 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6-4A0A075B6B4 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6-4A0A075B6B4 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6-4A0A075B6B4 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC13.42□□□□□ -0.26
Trav6-4A0A075B6B4 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trav6-4A0A075B6B4 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6-4A0A075B6B4 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC13.42□□□□□ -0.26
Trav6-4A0A075B6B4 Gm10812-201ENSMUST00000099864 546 ntBASIC13.42□□□□□ -0.26
Trav6-4A0A075B6B4 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6-4A0A075B6B4 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6-4A0A075B6B4 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6-4A0A075B6B4 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6-4A0A075B6B4 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6-4A0A075B6B4 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC13.42□□□□□ -0.26
Trav6-4A0A075B6B4 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-4A0A075B6B4 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-4A0A075B6B4 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC13.41□□□□□ -0.26
Trav6-4A0A075B6B4 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-4A0A075B6B4 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-4A0A075B6B4 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-4A0A075B6B4 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-4A0A075B6B4 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-4A0A075B6B4 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Trav6-4A0A075B6B4 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-4A0A075B6B4 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-4A0A075B6B4 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-4A0A075B6B4 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-4A0A075B6B4 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-4A0A075B6B4 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-4A0A075B6B4 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC13.41□□□□□ -0.26
Trav6-4A0A075B6B4 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC13.41□□□□□ -0.26
Trav6-4A0A075B6B4 Gm13401-201ENSMUST00000117074 291 ntBASIC13.41□□□□□ -0.26
Trav6-4A0A075B6B4 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-4A0A075B6B4 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-4A0A075B6B4 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC13.41□□□□□ -0.26
Trav6-4A0A075B6B4 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC13.41□□□□□ -0.26
Trav6-4A0A075B6B4 AC154649.1-201ENSMUST00000227392 384 ntBASIC13.41□□□□□ -0.26
Trav6-4A0A075B6B4 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-4A0A075B6B4 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-4A0A075B6B4 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-4A0A075B6B4 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Trav6-4A0A075B6B4 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Trav6-4A0A075B6B4 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-4A0A075B6B4 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC13.41□□□□□ -0.26
Trav6-4A0A075B6B4 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-4A0A075B6B4 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC13.41□□□□□ -0.26
Trav6-4A0A075B6B4 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-4A0A075B6B4 Rarb-207ENSMUST00000225921 2756 ntBASIC13.41□□□□□ -0.26
Trav6-4A0A075B6B4 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-4A0A075B6B4 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-4A0A075B6B4 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6-4A0A075B6B4 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6-4A0A075B6B4 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav6-4A0A075B6B4 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6-4A0A075B6B4 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6-4A0A075B6B4 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6-4A0A075B6B4 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6-4A0A075B6B4 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6-4A0A075B6B4 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6-4A0A075B6B4 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6-4A0A075B6B4 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6-4A0A075B6B4 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6-4A0A075B6B4 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6-4A0A075B6B4 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC13.4□□□□□ -0.26
Trav6-4A0A075B6B4 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Trav6-4A0A075B6B4 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC13.4□□□□□ -0.27
Trav6-4A0A075B6B4 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-4A0A075B6B4 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-4A0A075B6B4 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-4A0A075B6B4 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-4A0A075B6B4 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-4A0A075B6B4 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms