Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6n-6A0A075B6B2 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6n-6A0A075B6B2 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6n-6A0A075B6B2 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6n-6A0A075B6B2 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trav6n-6A0A075B6B2 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6n-6A0A075B6B2 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6n-6A0A075B6B2 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav6n-6A0A075B6B2 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6n-6A0A075B6B2 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6n-6A0A075B6B2 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6n-6A0A075B6B2 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6n-6A0A075B6B2 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6n-6A0A075B6B2 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6n-6A0A075B6B2 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6n-6A0A075B6B2 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trav6n-6A0A075B6B2 Gm26571-201ENSMUST00000181399 666 ntBASIC12.99□□□□□ -0.33
Trav6n-6A0A075B6B2 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trav6n-6A0A075B6B2 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6n-6A0A075B6B2 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trav6n-6A0A075B6B2 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6n-6A0A075B6B2 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6n-6A0A075B6B2 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6n-6A0A075B6B2 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6n-6A0A075B6B2 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6n-6A0A075B6B2 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trav6n-6A0A075B6B2 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6n-6A0A075B6B2 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trav6n-6A0A075B6B2 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trav6n-6A0A075B6B2 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6n-6A0A075B6B2 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trav6n-6A0A075B6B2 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav6n-6A0A075B6B2 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6n-6A0A075B6B2 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6n-6A0A075B6B2 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Trav6n-6A0A075B6B2 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav6n-6A0A075B6B2 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6n-6A0A075B6B2 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trav6n-6A0A075B6B2 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6n-6A0A075B6B2 Gm10655-201ENSMUST00000098658 1397 ntBASIC12.98□□□□□ -0.33
Trav6n-6A0A075B6B2 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6n-6A0A075B6B2 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav6n-6A0A075B6B2 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6n-6A0A075B6B2 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6n-6A0A075B6B2 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6n-6A0A075B6B2 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trav6n-6A0A075B6B2 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6n-6A0A075B6B2 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav6n-6A0A075B6B2 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav6n-6A0A075B6B2 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6n-6A0A075B6B2 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6n-6A0A075B6B2 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6n-6A0A075B6B2 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6n-6A0A075B6B2 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trav6n-6A0A075B6B2 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trav6n-6A0A075B6B2 Gm37519-201ENSMUST00000191687 2210 ntBASIC12.98□□□□□ -0.33
Trav6n-6A0A075B6B2 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6n-6A0A075B6B2 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6n-6A0A075B6B2 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6n-6A0A075B6B2 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6n-6A0A075B6B2 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6n-6A0A075B6B2 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6n-6A0A075B6B2 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6n-6A0A075B6B2 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6n-6A0A075B6B2 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6n-6A0A075B6B2 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6n-6A0A075B6B2 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC12.97□□□□□ -0.33
Trav6n-6A0A075B6B2 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6n-6A0A075B6B2 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6n-6A0A075B6B2 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trav6n-6A0A075B6B2 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Trav6n-6A0A075B6B2 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6n-6A0A075B6B2 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trav6n-6A0A075B6B2 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6n-6A0A075B6B2 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC12.97□□□□□ -0.33
Trav6n-6A0A075B6B2 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC12.97□□□□□ -0.33
Trav6n-6A0A075B6B2 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC12.97□□□□□ -0.33
Trav6n-6A0A075B6B2 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC12.97□□□□□ -0.33
Trav6n-6A0A075B6B2 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6n-6A0A075B6B2 Gm26917-202ENSMUST00000192833 3329 ntBASIC12.97□□□□□ -0.33
Trav6n-6A0A075B6B2 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6n-6A0A075B6B2 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6n-6A0A075B6B2 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6n-6A0A075B6B2 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC12.97□□□□□ -0.33
Trav6n-6A0A075B6B2 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6n-6A0A075B6B2 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6n-6A0A075B6B2 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6n-6A0A075B6B2 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6n-6A0A075B6B2 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6n-6A0A075B6B2 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6n-6A0A075B6B2 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6n-6A0A075B6B2 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6n-6A0A075B6B2 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6n-6A0A075B6B2 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6n-6A0A075B6B2 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6n-6A0A075B6B2 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6n-6A0A075B6B2 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6n-6A0A075B6B2 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6n-6A0A075B6B2 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6n-6A0A075B6B2 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms