Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav18A0A075B656 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trav18A0A075B656 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav18A0A075B656 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Trav18A0A075B656 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC14.29□□□□□ -0.12
Trav18A0A075B656 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav18A0A075B656 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Trav18A0A075B656 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav18A0A075B656 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC14.29□□□□□ -0.12
Trav18A0A075B656 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC14.29□□□□□ -0.12
Trav18A0A075B656 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC14.29□□□□□ -0.12
Trav18A0A075B656 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav18A0A075B656 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav18A0A075B656 AC125311.2-201ENSMUST00000227477 1940 ntBASIC14.29□□□□□ -0.12
Trav18A0A075B656 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav18A0A075B656 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Trav18A0A075B656 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav18A0A075B656 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trav18A0A075B656 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav18A0A075B656 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav18A0A075B656 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav18A0A075B656 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trav18A0A075B656 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav18A0A075B656 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav18A0A075B656 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav18A0A075B656 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav18A0A075B656 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC14.28□□□□□ -0.12
Trav18A0A075B656 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav18A0A075B656 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trav18A0A075B656 Mir5133-201ENSMUST00000174955 77 ntBASIC14.28□□□□□ -0.12
Trav18A0A075B656 Mir8112-201ENSMUST00000184382 131 ntBASIC14.28□□□□□ -0.12
Trav18A0A075B656 Gm8495-201ENSMUST00000188740 694 ntBASIC14.28□□□□□ -0.12
Trav18A0A075B656 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav18A0A075B656 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav18A0A075B656 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC14.28□□□□□ -0.12
Trav18A0A075B656 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trav18A0A075B656 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav18A0A075B656 Rab3c-203ENSMUST00000224180 967 ntBASIC14.28□□□□□ -0.12
Trav18A0A075B656 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav18A0A075B656 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav18A0A075B656 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav18A0A075B656 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav18A0A075B656 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav18A0A075B656 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav18A0A075B656 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav18A0A075B656 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
Trav18A0A075B656 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.27□□□□□ -0.12
Trav18A0A075B656 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav18A0A075B656 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC14.27□□□□□ -0.12
Trav18A0A075B656 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Trav18A0A075B656 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav18A0A075B656 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trav18A0A075B656 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC14.27□□□□□ -0.13
Trav18A0A075B656 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Trav18A0A075B656 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav18A0A075B656 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav18A0A075B656 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav18A0A075B656 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav18A0A075B656 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav18A0A075B656 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Trav18A0A075B656 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav18A0A075B656 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav18A0A075B656 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav18A0A075B656 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC14.27□□□□□ -0.13
Trav18A0A075B656 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Trav18A0A075B656 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav18A0A075B656 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav18A0A075B656 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav18A0A075B656 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.26□□□□□ -0.13
Trav18A0A075B656 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav18A0A075B656 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC14.26□□□□□ -0.13
Trav18A0A075B656 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trav18A0A075B656 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trav18A0A075B656 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav18A0A075B656 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav18A0A075B656 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trav18A0A075B656 Gm10418-201ENSMUST00000100943 576 ntBASIC14.26□□□□□ -0.13
Trav18A0A075B656 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Trav18A0A075B656 Mir2861-201ENSMUST00000175539 82 ntBASIC14.26□□□□□ -0.13
Trav18A0A075B656 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Trav18A0A075B656 Gm27405-201ENSMUST00000184201 112 ntBASIC14.26□□□□□ -0.13
Trav18A0A075B656 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trav18A0A075B656 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav18A0A075B656 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC14.26□□□□□ -0.13
Trav18A0A075B656 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav18A0A075B656 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav18A0A075B656 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav18A0A075B656 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trav18A0A075B656 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trav18A0A075B656 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav18A0A075B656 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trav18A0A075B656 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trav18A0A075B656 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trav18A0A075B656 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav18A0A075B656 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trav18A0A075B656 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav18A0A075B656 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav18A0A075B656 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav18A0A075B656 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav18A0A075B656 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms