Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav12-3A0A075B648 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trav12-3A0A075B648 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav12-3A0A075B648 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav12-3A0A075B648 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12-3A0A075B648 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12-3A0A075B648 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12-3A0A075B648 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trav12-3A0A075B648 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12-3A0A075B648 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12-3A0A075B648 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav12-3A0A075B648 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trav12-3A0A075B648 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav12-3A0A075B648 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC12.74□□□□□ -0.37
Trav12-3A0A075B648 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12-3A0A075B648 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12-3A0A075B648 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12-3A0A075B648 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trav12-3A0A075B648 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12-3A0A075B648 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trav12-3A0A075B648 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12-3A0A075B648 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12-3A0A075B648 Gm45212-201ENSMUST00000205831 3403 ntBASIC12.74□□□□□ -0.37
Trav12-3A0A075B648 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12-3A0A075B648 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav12-3A0A075B648 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav12-3A0A075B648 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav12-3A0A075B648 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trav12-3A0A075B648 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav12-3A0A075B648 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav12-3A0A075B648 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav12-3A0A075B648 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav12-3A0A075B648 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav12-3A0A075B648 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav12-3A0A075B648 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav12-3A0A075B648 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trav12-3A0A075B648 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Trav12-3A0A075B648 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav12-3A0A075B648 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav12-3A0A075B648 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav12-3A0A075B648 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav12-3A0A075B648 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav12-3A0A075B648 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav12-3A0A075B648 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav12-3A0A075B648 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav12-3A0A075B648 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav12-3A0A075B648 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav12-3A0A075B648 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12-3A0A075B648 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12-3A0A075B648 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trav12-3A0A075B648 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12-3A0A075B648 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Trav12-3A0A075B648 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12-3A0A075B648 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12-3A0A075B648 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trav12-3A0A075B648 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12-3A0A075B648 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12-3A0A075B648 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12-3A0A075B648 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12-3A0A075B648 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12-3A0A075B648 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC12.72□□□□□ -0.37
Trav12-3A0A075B648 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav12-3A0A075B648 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12-3A0A075B648 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12-3A0A075B648 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12-3A0A075B648 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12-3A0A075B648 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12-3A0A075B648 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12-3A0A075B648 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12-3A0A075B648 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12-3A0A075B648 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12-3A0A075B648 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12-3A0A075B648 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav12-3A0A075B648 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12-3A0A075B648 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12-3A0A075B648 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trav12-3A0A075B648 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trav12-3A0A075B648 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12-3A0A075B648 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12-3A0A075B648 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav12-3A0A075B648 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav12-3A0A075B648 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav12-3A0A075B648 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav12-3A0A075B648 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav12-3A0A075B648 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav12-3A0A075B648 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav12-3A0A075B648 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav12-3A0A075B648 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav12-3A0A075B648 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav12-3A0A075B648 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav12-3A0A075B648 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC12.71□□□□□ -0.37
Trav12-3A0A075B648 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav12-3A0A075B648 Krt8-ps-201ENSMUST00000208495 945 ntBASIC12.71□□□□□ -0.37
Trav12-3A0A075B648 Nsd1-203ENSMUST00000224156 1149 ntBASIC12.71□□□□□ -0.37
Trav12-3A0A075B648 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav12-3A0A075B648 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav12-3A0A075B648 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav12-3A0A075B648 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav12-3A0A075B648 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav12-3A0A075B648 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms