Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6-7-dv9A0A075B639 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
Trav6-7-dv9A0A075B639 Gm45560-201ENSMUST00000211492 1472 ntBASIC15.46■□□□□ 0.07
Trav6-7-dv9A0A075B639 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6-7-dv9A0A075B639 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6-7-dv9A0A075B639 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6-7-dv9A0A075B639 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Trav6-7-dv9A0A075B639 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6-7-dv9A0A075B639 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6-7-dv9A0A075B639 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6-7-dv9A0A075B639 Gm6598-201ENSMUST00000202719 2615 ntBASIC15.46■□□□□ 0.07
Trav6-7-dv9A0A075B639 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6-7-dv9A0A075B639 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6-7-dv9A0A075B639 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6-7-dv9A0A075B639 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6-7-dv9A0A075B639 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6-7-dv9A0A075B639 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6-7-dv9A0A075B639 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6-7-dv9A0A075B639 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6-7-dv9A0A075B639 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
Trav6-7-dv9A0A075B639 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC15.45■□□□□ 0.06
Trav6-7-dv9A0A075B639 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Trav6-7-dv9A0A075B639 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6-7-dv9A0A075B639 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6-7-dv9A0A075B639 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6-7-dv9A0A075B639 Gm12441-201ENSMUST00000121806 588 ntBASIC15.45■□□□□ 0.06
Trav6-7-dv9A0A075B639 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6-7-dv9A0A075B639 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6-7-dv9A0A075B639 Slc35b2-207ENSMUST00000226086 850 ntBASIC15.45■□□□□ 0.06
Trav6-7-dv9A0A075B639 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6-7-dv9A0A075B639 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Trav6-7-dv9A0A075B639 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Trav6-7-dv9A0A075B639 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6-7-dv9A0A075B639 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Trav6-7-dv9A0A075B639 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6-7-dv9A0A075B639 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6-7-dv9A0A075B639 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6-7-dv9A0A075B639 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6-7-dv9A0A075B639 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Trav6-7-dv9A0A075B639 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6-7-dv9A0A075B639 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6-7-dv9A0A075B639 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Trav6-7-dv9A0A075B639 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6-7-dv9A0A075B639 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.44■□□□□ 0.06
Trav6-7-dv9A0A075B639 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6-7-dv9A0A075B639 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Trav6-7-dv9A0A075B639 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
Trav6-7-dv9A0A075B639 Gm6576-201ENSMUST00000169678 883 ntBASIC15.44■□□□□ 0.06
Trav6-7-dv9A0A075B639 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6-7-dv9A0A075B639 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Trav6-7-dv9A0A075B639 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6-7-dv9A0A075B639 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6-7-dv9A0A075B639 Gm37519-201ENSMUST00000191687 2210 ntBASIC15.44■□□□□ 0.06
Trav6-7-dv9A0A075B639 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6-7-dv9A0A075B639 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6-7-dv9A0A075B639 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6-7-dv9A0A075B639 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6-7-dv9A0A075B639 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6-7-dv9A0A075B639 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6-7-dv9A0A075B639 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6-7-dv9A0A075B639 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Trav6-7-dv9A0A075B639 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6-7-dv9A0A075B639 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6-7-dv9A0A075B639 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6-7-dv9A0A075B639 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6-7-dv9A0A075B639 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6-7-dv9A0A075B639 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6-7-dv9A0A075B639 Gm18666-201ENSMUST00000190039 958 ntBASIC15.43■□□□□ 0.06
Trav6-7-dv9A0A075B639 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6-7-dv9A0A075B639 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6-7-dv9A0A075B639 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6-7-dv9A0A075B639 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6-7-dv9A0A075B639 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6-7-dv9A0A075B639 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC15.43■□□□□ 0.06
Trav6-7-dv9A0A075B639 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Trav6-7-dv9A0A075B639 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Trav6-7-dv9A0A075B639 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Trav6-7-dv9A0A075B639 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6-7-dv9A0A075B639 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6-7-dv9A0A075B639 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6-7-dv9A0A075B639 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6-7-dv9A0A075B639 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Trav6-7-dv9A0A075B639 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6-7-dv9A0A075B639 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6-7-dv9A0A075B639 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC15.42■□□□□ 0.06
Trav6-7-dv9A0A075B639 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6-7-dv9A0A075B639 Gm20049-201ENSMUST00000219950 730 ntBASIC15.42■□□□□ 0.06
Trav6-7-dv9A0A075B639 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6-7-dv9A0A075B639 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6-7-dv9A0A075B639 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6-7-dv9A0A075B639 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6-7-dv9A0A075B639 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6-7-dv9A0A075B639 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6-7-dv9A0A075B639 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Trav6-7-dv9A0A075B639 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6-7-dv9A0A075B639 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
Trav6-7-dv9A0A075B639 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
Trav6-7-dv9A0A075B639 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6-7-dv9A0A075B639 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6-7-dv9A0A075B639 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms