Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav9n-4A0A075B631 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trav9n-4A0A075B631 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav9n-4A0A075B631 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav9n-4A0A075B631 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trav9n-4A0A075B631 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav9n-4A0A075B631 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav9n-4A0A075B631 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav9n-4A0A075B631 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav9n-4A0A075B631 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav9n-4A0A075B631 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC11.94□□□□□ -0.5
Trav9n-4A0A075B631 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav9n-4A0A075B631 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav9n-4A0A075B631 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav9n-4A0A075B631 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav9n-4A0A075B631 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav9n-4A0A075B631 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav9n-4A0A075B631 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trav9n-4A0A075B631 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav9n-4A0A075B631 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav9n-4A0A075B631 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav9n-4A0A075B631 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav9n-4A0A075B631 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav9n-4A0A075B631 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav9n-4A0A075B631 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav9n-4A0A075B631 Gm2399-201ENSMUST00000104944 225 ntBASIC11.93□□□□□ -0.5
Trav9n-4A0A075B631 Gm7290-201ENSMUST00000104990 617 ntBASIC11.93□□□□□ -0.5
Trav9n-4A0A075B631 Gm12918-201ENSMUST00000120234 636 ntBASIC11.93□□□□□ -0.5
Trav9n-4A0A075B631 Gm15710-201ENSMUST00000121821 636 ntBASIC11.93□□□□□ -0.5
Trav9n-4A0A075B631 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav9n-4A0A075B631 Gm26571-201ENSMUST00000181399 666 ntBASIC11.93□□□□□ -0.5
Trav9n-4A0A075B631 Gm5075-201ENSMUST00000196916 622 ntBASIC11.93□□□□□ -0.5
Trav9n-4A0A075B631 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC11.93□□□□□ -0.5
Trav9n-4A0A075B631 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC11.93□□□□□ -0.5
Trav9n-4A0A075B631 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC11.93□□□□□ -0.5
Trav9n-4A0A075B631 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav9n-4A0A075B631 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav9n-4A0A075B631 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav9n-4A0A075B631 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
Trav9n-4A0A075B631 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav9n-4A0A075B631 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Trav9n-4A0A075B631 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav9n-4A0A075B631 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC11.92□□□□□ -0.5
Trav9n-4A0A075B631 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav9n-4A0A075B631 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav9n-4A0A075B631 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav9n-4A0A075B631 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav9n-4A0A075B631 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav9n-4A0A075B631 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC11.92□□□□□ -0.5
Trav9n-4A0A075B631 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav9n-4A0A075B631 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav9n-4A0A075B631 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC11.92□□□□□ -0.5
Trav9n-4A0A075B631 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC11.92□□□□□ -0.5
Trav9n-4A0A075B631 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC11.92□□□□□ -0.5
Trav9n-4A0A075B631 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav9n-4A0A075B631 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav9n-4A0A075B631 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Trav9n-4A0A075B631 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trav9n-4A0A075B631 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav9n-4A0A075B631 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Trav9n-4A0A075B631 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Trav9n-4A0A075B631 Ddx41-204ENSMUST00000224765 2199 ntBASIC11.92□□□□□ -0.5
Trav9n-4A0A075B631 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC11.92□□□□□ -0.5
Trav9n-4A0A075B631 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav9n-4A0A075B631 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav9n-4A0A075B631 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav9n-4A0A075B631 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC11.91□□□□□ -0.5
Trav9n-4A0A075B631 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav9n-4A0A075B631 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav9n-4A0A075B631 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav9n-4A0A075B631 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav9n-4A0A075B631 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav9n-4A0A075B631 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav9n-4A0A075B631 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC11.91□□□□□ -0.5
Trav9n-4A0A075B631 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC11.91□□□□□ -0.5
Trav9n-4A0A075B631 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav9n-4A0A075B631 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav9n-4A0A075B631 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav9n-4A0A075B631 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav9n-4A0A075B631 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav9n-4A0A075B631 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav9n-4A0A075B631 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav9n-4A0A075B631 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav9n-4A0A075B631 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav9n-4A0A075B631 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9n-4A0A075B631 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9n-4A0A075B631 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9n-4A0A075B631 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Trav9n-4A0A075B631 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9n-4A0A075B631 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9n-4A0A075B631 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9n-4A0A075B631 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9n-4A0A075B631 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9n-4A0A075B631 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9n-4A0A075B631 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9n-4A0A075B631 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9n-4A0A075B631 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9n-4A0A075B631 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9n-4A0A075B631 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9n-4A0A075B631 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms