Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC14.86□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.86□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.85□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC14.85□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Gm7514-201ENSMUST00000209475 934 ntBASIC14.85□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.85□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC14.85□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.84□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Gm10418-201ENSMUST00000100943 576 ntBASIC14.84□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 AC099934.2-201ENSMUST00000196389 70 ntBASIC14.84□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 AC156953.1-201ENSMUST00000196953 70 ntBASIC14.84□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 AC157822.2-201ENSMUST00000200291 70 ntBASIC14.84□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Gm29791-202ENSMUST00000207888 369 ntBASIC14.84□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Gm10493-201ENSMUST00000097270 612 ntBASIC14.84□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Gm7292-201ENSMUST00000194706 2527 ntBASIC14.84□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC14.83□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC14.83□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC14.83□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC14.83□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Gm15743-202ENSMUST00000182690 1901 ntBASIC14.82□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.82□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC14.82□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.82□□□□□ -0.04
Trav15d-1-dv6d-1A0A075B624 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms