Protein–RNA interactions for Protein: A0A075B604

Trav7n-5, T cell receptor alpha variable 7D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-5A0A075B604 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav7n-5A0A075B604 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Trav7n-5A0A075B604 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav7n-5A0A075B604 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav7n-5A0A075B604 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav7n-5A0A075B604 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav7n-5A0A075B604 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav7n-5A0A075B604 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav7n-5A0A075B604 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav7n-5A0A075B604 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav7n-5A0A075B604 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav7n-5A0A075B604 Fam105a-203ENSMUST00000226170 3043 ntBASIC14.3□□□□□ -0.12
Trav7n-5A0A075B604 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav7n-5A0A075B604 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav7n-5A0A075B604 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav7n-5A0A075B604 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trav7n-5A0A075B604 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC14.29□□□□□ -0.12
Trav7n-5A0A075B604 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav7n-5A0A075B604 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav7n-5A0A075B604 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trav7n-5A0A075B604 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav7n-5A0A075B604 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav7n-5A0A075B604 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC14.29□□□□□ -0.12
Trav7n-5A0A075B604 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Trav7n-5A0A075B604 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Trav7n-5A0A075B604 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav7n-5A0A075B604 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC14.29□□□□□ -0.12
Trav7n-5A0A075B604 Gm10252-201ENSMUST00000209541 832 ntBASIC14.29□□□□□ -0.12
Trav7n-5A0A075B604 Arhgef4-208ENSMUST00000211073 171 ntBASIC14.29□□□□□ -0.12
Trav7n-5A0A075B604 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav7n-5A0A075B604 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav7n-5A0A075B604 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
Trav7n-5A0A075B604 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav7n-5A0A075B604 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav7n-5A0A075B604 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav7n-5A0A075B604 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav7n-5A0A075B604 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav7n-5A0A075B604 Dmtn-207ENSMUST00000228001 2437 ntBASIC14.29□□□□□ -0.12
Trav7n-5A0A075B604 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav7n-5A0A075B604 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav7n-5A0A075B604 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Trav7n-5A0A075B604 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav7n-5A0A075B604 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC14.28□□□□□ -0.12
Trav7n-5A0A075B604 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav7n-5A0A075B604 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Trav7n-5A0A075B604 Gm38027-201ENSMUST00000192315 235 ntBASIC14.28□□□□□ -0.12
Trav7n-5A0A075B604 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC14.28□□□□□ -0.12
Trav7n-5A0A075B604 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC14.28□□□□□ -0.12
Trav7n-5A0A075B604 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav7n-5A0A075B604 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav7n-5A0A075B604 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav7n-5A0A075B604 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav7n-5A0A075B604 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav7n-5A0A075B604 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav7n-5A0A075B604 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
Trav7n-5A0A075B604 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav7n-5A0A075B604 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav7n-5A0A075B604 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
Trav7n-5A0A075B604 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav7n-5A0A075B604 Gm42939-201ENSMUST00000197514 2205 ntBASIC14.27□□□□□ -0.12
Trav7n-5A0A075B604 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav7n-5A0A075B604 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav7n-5A0A075B604 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav7n-5A0A075B604 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav7n-5A0A075B604 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Trav7n-5A0A075B604 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav7n-5A0A075B604 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav7n-5A0A075B604 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC14.27□□□□□ -0.12
Trav7n-5A0A075B604 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav7n-5A0A075B604 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC14.27□□□□□ -0.13
Trav7n-5A0A075B604 Gm37055-201ENSMUST00000191866 133 ntBASIC14.27□□□□□ -0.13
Trav7n-5A0A075B604 Gm37025-201ENSMUST00000195159 829 ntBASIC14.27□□□□□ -0.13
Trav7n-5A0A075B604 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav7n-5A0A075B604 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav7n-5A0A075B604 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav7n-5A0A075B604 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav7n-5A0A075B604 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav7n-5A0A075B604 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav7n-5A0A075B604 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav7n-5A0A075B604 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav7n-5A0A075B604 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC14.27□□□□□ -0.13
Trav7n-5A0A075B604 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav7n-5A0A075B604 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav7n-5A0A075B604 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trav7n-5A0A075B604 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav7n-5A0A075B604 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Trav7n-5A0A075B604 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav7n-5A0A075B604 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav7n-5A0A075B604 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav7n-5A0A075B604 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav7n-5A0A075B604 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav7n-5A0A075B604 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav7n-5A0A075B604 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav7n-5A0A075B604 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav7n-5A0A075B604 Gm12085-201ENSMUST00000119263 940 ntBASIC14.26□□□□□ -0.13
Trav7n-5A0A075B604 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC14.26□□□□□ -0.13
Trav7n-5A0A075B604 Gm3375-201ENSMUST00000203929 796 ntBASIC14.26□□□□□ -0.13
Trav7n-5A0A075B604 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC14.26□□□□□ -0.13
Trav7n-5A0A075B604 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC14.26□□□□□ -0.13
Trav7n-5A0A075B604 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms