Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav9-1A0A075B601 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC13.63□□□□□ -0.23
Trav9-1A0A075B601 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC13.63□□□□□ -0.23
Trav9-1A0A075B601 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav9-1A0A075B601 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trav9-1A0A075B601 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Trav9-1A0A075B601 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trav9-1A0A075B601 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav9-1A0A075B601 Gm43808-201ENSMUST00000202534 2065 ntBASIC13.62□□□□□ -0.23
Trav9-1A0A075B601 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav9-1A0A075B601 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav9-1A0A075B601 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trav9-1A0A075B601 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav9-1A0A075B601 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trav9-1A0A075B601 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav9-1A0A075B601 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trav9-1A0A075B601 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav9-1A0A075B601 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav9-1A0A075B601 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav9-1A0A075B601 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav9-1A0A075B601 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trav9-1A0A075B601 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav9-1A0A075B601 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav9-1A0A075B601 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trav9-1A0A075B601 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav9-1A0A075B601 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav9-1A0A075B601 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav9-1A0A075B601 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC13.61□□□□□ -0.23
Trav9-1A0A075B601 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav9-1A0A075B601 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav9-1A0A075B601 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav9-1A0A075B601 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav9-1A0A075B601 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC13.61□□□□□ -0.23
Trav9-1A0A075B601 Rab3c-203ENSMUST00000224180 967 ntBASIC13.61□□□□□ -0.23
Trav9-1A0A075B601 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav9-1A0A075B601 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav9-1A0A075B601 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC13.61□□□□□ -0.23
Trav9-1A0A075B601 Flg-201ENSMUST00000050758 1488 ntBASIC13.61□□□□□ -0.23
Trav9-1A0A075B601 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav9-1A0A075B601 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav9-1A0A075B601 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav9-1A0A075B601 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav9-1A0A075B601 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav9-1A0A075B601 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav9-1A0A075B601 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav9-1A0A075B601 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trav9-1A0A075B601 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav9-1A0A075B601 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav9-1A0A075B601 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav9-1A0A075B601 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav9-1A0A075B601 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trav9-1A0A075B601 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav9-1A0A075B601 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav9-1A0A075B601 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav9-1A0A075B601 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav9-1A0A075B601 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Trav9-1A0A075B601 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trav9-1A0A075B601 Gm29791-202ENSMUST00000207888 369 ntBASIC13.6□□□□□ -0.23
Trav9-1A0A075B601 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav9-1A0A075B601 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC13.6□□□□□ -0.23
Trav9-1A0A075B601 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav9-1A0A075B601 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav9-1A0A075B601 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trav9-1A0A075B601 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trav9-1A0A075B601 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
Trav9-1A0A075B601 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trav9-1A0A075B601 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC13.6□□□□□ -0.23
Trav9-1A0A075B601 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trav9-1A0A075B601 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trav9-1A0A075B601 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav9-1A0A075B601 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC13.59□□□□□ -0.23
Trav9-1A0A075B601 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav9-1A0A075B601 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav9-1A0A075B601 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav9-1A0A075B601 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC13.59□□□□□ -0.23
Trav9-1A0A075B601 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav9-1A0A075B601 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav9-1A0A075B601 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav9-1A0A075B601 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC13.59□□□□□ -0.23
Trav9-1A0A075B601 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav9-1A0A075B601 Gm5408-201ENSMUST00000197998 747 ntBASIC13.59□□□□□ -0.23
Trav9-1A0A075B601 Gm44672-201ENSMUST00000206944 1098 ntBASIC13.59□□□□□ -0.23
Trav9-1A0A075B601 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav9-1A0A075B601 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav9-1A0A075B601 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav9-1A0A075B601 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Trav9-1A0A075B601 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav9-1A0A075B601 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav9-1A0A075B601 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav9-1A0A075B601 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav9-1A0A075B601 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav9-1A0A075B601 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav9-1A0A075B601 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav9-1A0A075B601 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav9-1A0A075B601 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav9-1A0A075B601 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav9-1A0A075B601 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav9-1A0A075B601 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav9-1A0A075B601 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Trav9-1A0A075B601 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms