Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Trbv4A0A075B5I2 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trbv4A0A075B5I2 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trbv4A0A075B5I2 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trbv4A0A075B5I2 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trbv4A0A075B5I2 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trbv4A0A075B5I2 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trbv4A0A075B5I2 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trbv4A0A075B5I2 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trbv4A0A075B5I2 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Trbv4A0A075B5I2 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trbv4A0A075B5I2 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trbv4A0A075B5I2 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trbv4A0A075B5I2 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.48■□□□□ 0.39
Trbv4A0A075B5I2 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trbv4A0A075B5I2 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.48■□□□□ 0.39
Trbv4A0A075B5I2 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Trbv4A0A075B5I2 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trbv4A0A075B5I2 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trbv4A0A075B5I2 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trbv4A0A075B5I2 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trbv4A0A075B5I2 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trbv4A0A075B5I2 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trbv4A0A075B5I2 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
Trbv4A0A075B5I2 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trbv4A0A075B5I2 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.48■□□□□ 0.39
Trbv4A0A075B5I2 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trbv4A0A075B5I2 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trbv4A0A075B5I2 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.47■□□□□ 0.39
Trbv4A0A075B5I2 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trbv4A0A075B5I2 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trbv4A0A075B5I2 Gm43183-201ENSMUST00000200632 547 ntBASIC17.47■□□□□ 0.39
Trbv4A0A075B5I2 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trbv4A0A075B5I2 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Trbv4A0A075B5I2 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trbv4A0A075B5I2 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trbv4A0A075B5I2 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
Trbv4A0A075B5I2 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trbv4A0A075B5I2 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trbv4A0A075B5I2 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Trbv4A0A075B5I2 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trbv4A0A075B5I2 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trbv4A0A075B5I2 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trbv4A0A075B5I2 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trbv4A0A075B5I2 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trbv4A0A075B5I2 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Trbv4A0A075B5I2 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.46■□□□□ 0.39
Trbv4A0A075B5I2 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.46■□□□□ 0.39
Trbv4A0A075B5I2 Gm4974-201ENSMUST00000209974 875 ntBASIC17.46■□□□□ 0.39
Trbv4A0A075B5I2 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trbv4A0A075B5I2 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trbv4A0A075B5I2 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.38
Trbv4A0A075B5I2 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Trbv4A0A075B5I2 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Trbv4A0A075B5I2 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trbv4A0A075B5I2 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trbv4A0A075B5I2 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trbv4A0A075B5I2 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trbv4A0A075B5I2 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Trbv4A0A075B5I2 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trbv4A0A075B5I2 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trbv4A0A075B5I2 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trbv4A0A075B5I2 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.45■□□□□ 0.38
Trbv4A0A075B5I2 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.45■□□□□ 0.38
Trbv4A0A075B5I2 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trbv4A0A075B5I2 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.45■□□□□ 0.38
Trbv4A0A075B5I2 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trbv4A0A075B5I2 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trbv4A0A075B5I2 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.45■□□□□ 0.38
Trbv4A0A075B5I2 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trbv4A0A075B5I2 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trbv4A0A075B5I2 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trbv4A0A075B5I2 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trbv4A0A075B5I2 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trbv4A0A075B5I2 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.45■□□□□ 0.38
Trbv4A0A075B5I2 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.45■□□□□ 0.38
Trbv4A0A075B5I2 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trbv4A0A075B5I2 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Trbv4A0A075B5I2 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trbv4A0A075B5I2 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.45■□□□□ 0.38
Trbv4A0A075B5I2 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trbv4A0A075B5I2 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Trbv4A0A075B5I2 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Trbv4A0A075B5I2 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.45■□□□□ 0.38
Trbv4A0A075B5I2 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trbv4A0A075B5I2 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trbv4A0A075B5I2 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trbv4A0A075B5I2 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Trbv4A0A075B5I2 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Trbv4A0A075B5I2 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trbv4A0A075B5I2 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Trbv4A0A075B5I2 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Trbv4A0A075B5I2 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trbv4A0A075B5I2 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Trbv4A0A075B5I2 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trbv4A0A075B5I2 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trbv4A0A075B5I2 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.44■□□□□ 0.38
Trbv4A0A075B5I2 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Trbv4A0A075B5I2 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trbv4A0A075B5I2 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms