Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC5.22□□□□□ -1.57
Nkx6-1Q99MA9 Gm37186-201ENSMUST00000195629 2861 ntBASIC5.22□□□□□ -1.57
Nkx6-1Q99MA9 Olfr479-203ENSMUST00000214599 3248 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Nkx6-1Q99MA9 Gm43025-201ENSMUST00000201764 1886 ntBASIC5.22□□□□□ -1.57
Nkx6-1Q99MA9 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Nkx6-1Q99MA9 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Nkx6-1Q99MA9 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
Nkx6-1Q99MA9 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC5.22□□□□□ -1.57
Nkx6-1Q99MA9 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC5.22□□□□□ -1.57
Nkx6-1Q99MA9 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Nkx6-1Q99MA9 Gm23274-201ENSMUST00000104056 130 ntBASIC5.22□□□□□ -1.57
Nkx6-1Q99MA9 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC5.22□□□□□ -1.57
Nkx6-1Q99MA9 Gm14909-201ENSMUST00000117853 351 ntBASIC5.22□□□□□ -1.57
Nkx6-1Q99MA9 Gm14669-201ENSMUST00000118841 250 ntBASIC5.22□□□□□ -1.57
Nkx6-1Q99MA9 Gm11366-201ENSMUST00000119279 429 ntBASIC5.22□□□□□ -1.57
Nkx6-1Q99MA9 Gm13435-201ENSMUST00000120111 1023 ntBASIC5.22□□□□□ -1.57
Nkx6-1Q99MA9 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC5.22□□□□□ -1.57
Nkx6-1Q99MA9 Gm22480-201ENSMUST00000122568 128 ntBASIC5.22□□□□□ -1.57
Nkx6-1Q99MA9 Gm14364-201ENSMUST00000129209 267 ntBASIC5.22□□□□□ -1.57
Nkx6-1Q99MA9 Gm23124-201ENSMUST00000157650 107 ntBASIC5.22□□□□□ -1.57
Nkx6-1Q99MA9 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Nkx6-1Q99MA9 Gm20767-201ENSMUST00000179071 510 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Nkx6-1Q99MA9 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC5.22□□□□□ -1.57
Nkx6-1Q99MA9 Gm29134-201ENSMUST00000186579 126 ntBASIC5.22□□□□□ -1.57
Nkx6-1Q99MA9 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC5.22□□□□□ -1.57
Nkx6-1Q99MA9 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Nkx6-1Q99MA9 Gm28241-201ENSMUST00000190916 235 ntBASIC5.22□□□□□ -1.57
Nkx6-1Q99MA9 Gm43467-201ENSMUST00000197441 437 ntBASIC5.22□□□□□ -1.57
Nkx6-1Q99MA9 Mir5121-201ENSMUST00000198528 74 ntBASIC5.22□□□□□ -1.57
Nkx6-1Q99MA9 Gm44259-201ENSMUST00000204996 298 ntBASIC5.22□□□□□ -1.57
Nkx6-1Q99MA9 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC5.22□□□□□ -1.57
Nkx6-1Q99MA9 AC160031.1-201ENSMUST00000219914 522 ntBASIC5.22□□□□□ -1.57
Nkx6-1Q99MA9 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC5.22□□□□□ -1.57
Nkx6-1Q99MA9 AC166358.10-201ENSMUST00000220556 144 ntBASIC5.22□□□□□ -1.57
Nkx6-1Q99MA9 Gm18247-201ENSMUST00000222937 601 ntBASIC5.22□□□□□ -1.57
Nkx6-1Q99MA9 AC124489.2-201ENSMUST00000223930 589 ntBASIC5.22□□□□□ -1.57
Nkx6-1Q99MA9 AC158142.1-201ENSMUST00000226721 416 ntBASIC5.22□□□□□ -1.57
Nkx6-1Q99MA9 AC158142.2-201ENSMUST00000227892 635 ntBASIC5.22□□□□□ -1.57
Nkx6-1Q99MA9 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Nkx6-1Q99MA9 Mir194-1-201ENSMUST00000083647 67 ntBASIC5.22□□□□□ -1.57
Nkx6-1Q99MA9 Olfr231-202ENSMUST00000214446 5204 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Nkx6-1Q99MA9 Olfr221-202ENSMUST00000214071 3044 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Nkx6-1Q99MA9 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC5.22□□□□□ -1.57
Nkx6-1Q99MA9 Olfr1173-201ENSMUST00000099830 2268 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Nkx6-1Q99MA9 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Nkx6-1Q99MA9 9630010A21Rik-201ENSMUST00000192348 2703 ntBASIC5.22□□□□□ -1.57
Nkx6-1Q99MA9 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Nkx6-1Q99MA9 Malrd1-201ENSMUST00000146205 6738 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Nkx6-1Q99MA9 1810018F18Rik-203ENSMUST00000189764 1325 ntBASIC5.22□□□□□ -1.57
Nkx6-1Q99MA9 Zpld1-202ENSMUST00000143914 2697 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Nkx6-1Q99MA9 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC5.21□□□□□ -1.57
Nkx6-1Q99MA9 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
Nkx6-1Q99MA9 Gm44697-201ENSMUST00000207756 1679 ntBASIC5.21□□□□□ -1.57
Nkx6-1Q99MA9 CT009733.2-202ENSMUST00000224171 4748 ntBASIC5.21□□□□□ -1.57
Nkx6-1Q99MA9 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC5.21□□□□□ -1.57
Nkx6-1Q99MA9 Jade3-201ENSMUST00000043693 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
Nkx6-1Q99MA9 Ttc33-202ENSMUST00000081640 1583 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
Nkx6-1Q99MA9 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Nkx6-1Q99MA9 Gm37504-201ENSMUST00000192537 2374 ntBASIC5.21□□□□□ -1.57
Nkx6-1Q99MA9 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Nkx6-1Q99MA9 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Nkx6-1Q99MA9 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Nkx6-1Q99MA9 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Nkx6-1Q99MA9 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC5.21□□□□□ -1.58
Nkx6-1Q99MA9 Gm43485-201ENSMUST00000199292 1710 ntBASIC5.21□□□□□ -1.58
Nkx6-1Q99MA9 Olfr221-205ENSMUST00000216907 2859 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Nkx6-1Q99MA9 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Nkx6-1Q99MA9 Gm24275-201ENSMUST00000116780 146 ntBASIC5.21□□□□□ -1.58
Nkx6-1Q99MA9 Gm23879-201ENSMUST00000116874 126 ntBASIC5.21□□□□□ -1.58
Nkx6-1Q99MA9 Gm14382-201ENSMUST00000117374 437 ntBASIC5.21□□□□□ -1.58
Nkx6-1Q99MA9 Gm13475-201ENSMUST00000119290 234 ntBASIC5.21□□□□□ -1.58
Nkx6-1Q99MA9 Olfr637-ps1-201ENSMUST00000120386 471 ntBASIC5.21□□□□□ -1.58
Nkx6-1Q99MA9 Gm14919-201ENSMUST00000120839 390 ntBASIC5.21□□□□□ -1.58
Nkx6-1Q99MA9 Gm13973-201ENSMUST00000121371 894 ntBASIC5.21□□□□□ -1.58
Nkx6-1Q99MA9 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC5.21□□□□□ -1.58
Nkx6-1Q99MA9 Mir1946b-201ENSMUST00000157853 133 ntBASIC5.21□□□□□ -1.58
Nkx6-1Q99MA9 Gm25314-201ENSMUST00000178810 79 ntBASIC5.21□□□□□ -1.58
Nkx6-1Q99MA9 Gm23144-201ENSMUST00000180226 107 ntBASIC5.21□□□□□ -1.58
Nkx6-1Q99MA9 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC5.21□□□□□ -1.58
Nkx6-1Q99MA9 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Nkx6-1Q99MA9 Gm34176-201ENSMUST00000192621 474 ntBASIC5.21□□□□□ -1.58
Nkx6-1Q99MA9 Gm34068-201ENSMUST00000193310 632 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Nkx6-1Q99MA9 Gm37882-201ENSMUST00000195254 196 ntBASIC5.21□□□□□ -1.58
Nkx6-1Q99MA9 Gm43804-201ENSMUST00000198280 456 ntBASIC5.21□□□□□ -1.58
Nkx6-1Q99MA9 Gm44348-201ENSMUST00000200165 122 ntBASIC5.21□□□□□ -1.58
Nkx6-1Q99MA9 Gm29793-201ENSMUST00000202874 460 ntBASIC5.21□□□□□ -1.58
Nkx6-1Q99MA9 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Nkx6-1Q99MA9 Gm44307-201ENSMUST00000204466 764 ntBASIC5.21□□□□□ -1.58
Nkx6-1Q99MA9 Gm45215-201ENSMUST00000206407 395 ntBASIC5.21□□□□□ -1.58
Nkx6-1Q99MA9 Gm31510-202ENSMUST00000206795 239 ntTSL 3 BASIC5.21□□□□□ -1.58
Nkx6-1Q99MA9 Gm45375-201ENSMUST00000210338 280 ntBASIC5.21□□□□□ -1.58
Nkx6-1Q99MA9 Gm30676-201ENSMUST00000214000 1165 ntTSL 5 BASIC5.21□□□□□ -1.58
Nkx6-1Q99MA9 AL669916.5-201ENSMUST00000214874 361 ntBASIC5.21□□□□□ -1.58
Nkx6-1Q99MA9 AC161114.1-201ENSMUST00000218223 474 ntBASIC5.21□□□□□ -1.58
Nkx6-1Q99MA9 AC147240.1-201ENSMUST00000218767 431 ntBASIC5.21□□□□□ -1.58
Nkx6-1Q99MA9 AC159621.1-201ENSMUST00000223249 163 ntBASIC5.21□□□□□ -1.58
Nkx6-1Q99MA9 Olfr748-201ENSMUST00000073561 924 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Nkx6-1Q99MA9 Gm23626-201ENSMUST00000082458 133 ntBASIC5.21□□□□□ -1.58
Nkx6-1Q99MA9 9630002D21Rik-202ENSMUST00000222033 2345 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Nkx6-1Q99MA9 LOC102637012-201ENSMUST00000217248 2562 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 101 ms