Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Mecom-204ENSMUST00000166001 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Trim47Q8C0E3 Ect2-203ENSMUST00000108300 4086 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Trim47Q8C0E3 Asah2-201ENSMUST00000096119 4682 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Trim47Q8C0E3 CT025604.1-201ENSMUST00000221111 3436 ntBASIC6.35□□□□□ -1.39
Trim47Q8C0E3 Gpr65-201ENSMUST00000075072 2069 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trim47Q8C0E3 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trim47Q8C0E3 Acvr1c-202ENSMUST00000100085 4289 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Trim47Q8C0E3 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Trim47Q8C0E3 Gm37101-201ENSMUST00000191656 3660 ntBASIC6.35□□□□□ -1.39
Trim47Q8C0E3 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Trim47Q8C0E3 Gm37023-201ENSMUST00000192895 2426 ntBASIC6.35□□□□□ -1.39
Trim47Q8C0E3 Gm15457-201ENSMUST00000129513 3990 ntTSL 2 BASIC6.35□□□□□ -1.39
Trim47Q8C0E3 Igkv1-132-201ENSMUST00000103305 362 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Trim47Q8C0E3 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Trim47Q8C0E3 Gm9043-201ENSMUST00000119677 314 ntBASIC6.35□□□□□ -1.39
Trim47Q8C0E3 Gm14129-201ENSMUST00000122436 291 ntBASIC6.35□□□□□ -1.39
Trim47Q8C0E3 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Trim47Q8C0E3 Gm23901-201ENSMUST00000157570 107 ntBASIC6.35□□□□□ -1.39
Trim47Q8C0E3 Gm23774-201ENSMUST00000158990 131 ntBASIC6.35□□□□□ -1.39
Trim47Q8C0E3 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC6.35□□□□□ -1.39
Trim47Q8C0E3 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trim47Q8C0E3 Gm28847-201ENSMUST00000186778 700 ntBASIC6.35□□□□□ -1.39
Trim47Q8C0E3 Gm3010-201ENSMUST00000198805 448 ntBASIC6.35□□□□□ -1.39
Trim47Q8C0E3 Gm34609-201ENSMUST00000219284 789 ntTSL 5 BASIC6.35□□□□□ -1.39
Trim47Q8C0E3 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC6.35□□□□□ -1.39
Trim47Q8C0E3 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC6.35□□□□□ -1.39
Trim47Q8C0E3 AC164618.3-201ENSMUST00000224863 681 ntBASIC6.35□□□□□ -1.39
Trim47Q8C0E3 AC167013.2-202ENSMUST00000227035 333 ntBASIC6.35□□□□□ -1.39
Trim47Q8C0E3 mt-Ti-201ENSMUST00000082393 69 ntBASIC6.35□□□□□ -1.39
Trim47Q8C0E3 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trim47Q8C0E3 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Trim47Q8C0E3 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC6.35□□□□□ -1.39
Trim47Q8C0E3 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
Trim47Q8C0E3 9830132P13Rik-201ENSMUST00000198240 4187 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Trim47Q8C0E3 Dclre1a-204ENSMUST00000182276 4066 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trim47Q8C0E3 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Trim47Q8C0E3 Gm8675-201ENSMUST00000201408 1856 ntBASIC6.34□□□□□ -1.39
Trim47Q8C0E3 Gm38372-201ENSMUST00000194854 4028 ntBASIC6.34□□□□□ -1.39
Trim47Q8C0E3 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC6.34□□□□□ -1.39
Trim47Q8C0E3 Oas2-202ENSMUST00000081491 3961 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Trim47Q8C0E3 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Trim47Q8C0E3 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Trim47Q8C0E3 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Trim47Q8C0E3 Gm11774-201ENSMUST00000118601 293 ntBASIC6.34□□□□□ -1.39
Trim47Q8C0E3 Gm15400-201ENSMUST00000118944 601 ntBASIC6.34□□□□□ -1.39
Trim47Q8C0E3 Gm23279-201ENSMUST00000157912 97 ntBASIC6.34□□□□□ -1.39
Trim47Q8C0E3 Gm22529-201ENSMUST00000158817 123 ntBASIC6.34□□□□□ -1.39
Trim47Q8C0E3 Gm21999-201ENSMUST00000165985 387 ntBASIC6.34□□□□□ -1.39
Trim47Q8C0E3 Gm6486-201ENSMUST00000166202 434 ntBASIC6.34□□□□□ -1.39
Trim47Q8C0E3 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Trim47Q8C0E3 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Trim47Q8C0E3 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Trim47Q8C0E3 Gm27887-201ENSMUST00000184367 102 ntBASIC6.34□□□□□ -1.39
Trim47Q8C0E3 Gm29524-201ENSMUST00000190819 699 ntBASIC6.34□□□□□ -1.39
Trim47Q8C0E3 Gm42570-201ENSMUST00000195937 292 ntBASIC6.34□□□□□ -1.39
Trim47Q8C0E3 Gm43286-201ENSMUST00000197420 424 ntBASIC6.34□□□□□ -1.39
Trim47Q8C0E3 Igkv3-8-201ENSMUST00000197635 339 ntBASIC6.34□□□□□ -1.39
Trim47Q8C0E3 Mir142-201ENSMUST00000198092 64 ntBASIC6.34□□□□□ -1.39
Trim47Q8C0E3 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC6.34□□□□□ -1.39
Trim47Q8C0E3 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC6.34□□□□□ -1.39
Trim47Q8C0E3 Gm44074-201ENSMUST00000204562 337 ntBASIC6.34□□□□□ -1.39
Trim47Q8C0E3 AC121264.1-201ENSMUST00000214412 269 ntTSL 5 BASIC6.34□□□□□ -1.39
Trim47Q8C0E3 Gm29521-203ENSMUST00000216148 805 ntTSL 5 BASIC6.34□□□□□ -1.39
Trim47Q8C0E3 Gm46327-201ENSMUST00000218240 365 ntBASIC6.34□□□□□ -1.39
Trim47Q8C0E3 Olfr628-202ENSMUST00000218266 951 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Trim47Q8C0E3 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC6.34□□□□□ -1.39
Trim47Q8C0E3 AC154636.1-201ENSMUST00000223226 126 ntBASIC6.34□□□□□ -1.39
Trim47Q8C0E3 Gm23447-201ENSMUST00000082798 163 ntBASIC6.34□□□□□ -1.39
Trim47Q8C0E3 Gm23412-201ENSMUST00000083017 107 ntBASIC6.34□□□□□ -1.39
Trim47Q8C0E3 Olfr243-201ENSMUST00000098194 951 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Trim47Q8C0E3 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Trim47Q8C0E3 Atp8a2-201ENSMUST00000080368 12886 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Trim47Q8C0E3 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Trim47Q8C0E3 Olfr970-202ENSMUST00000213975 1630 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Trim47Q8C0E3 Zbbx-203ENSMUST00000107776 1978 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Trim47Q8C0E3 Olfr237-ps1-203ENSMUST00000216411 4115 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Trim47Q8C0E3 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Trim47Q8C0E3 P2ry12-203ENSMUST00000196583 2344 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Trim47Q8C0E3 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Trim47Q8C0E3 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Trim47Q8C0E3 Gm45762-201ENSMUST00000212863 2619 ntBASIC6.34□□□□□ -1.39
Trim47Q8C0E3 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Trim47Q8C0E3 AC164102.1-201ENSMUST00000220524 1553 ntBASIC6.34□□□□□ -1.39
Trim47Q8C0E3 Xpo7-203ENSMUST00000226448 3663 ntBASIC6.34□□□□□ -1.39
Trim47Q8C0E3 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Trim47Q8C0E3 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Trim47Q8C0E3 Gm45632-201ENSMUST00000211532 1888 ntBASIC6.34□□□□□ -1.39
Trim47Q8C0E3 AC154755.2-201ENSMUST00000224384 2857 ntBASIC6.34□□□□□ -1.39
Trim47Q8C0E3 Gm42727-201ENSMUST00000202446 2823 ntBASIC6.34□□□□□ -1.4
Trim47Q8C0E3 Zfp433-201ENSMUST00000085664 1800 ntTSL 5 BASIC6.34□□□□□ -1.4
Trim47Q8C0E3 Fbxw15-201ENSMUST00000056745 1495 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.4
Trim47Q8C0E3 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Trim47Q8C0E3 Ccdc186-201ENSMUST00000076085 2754 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Trim47Q8C0E3 Olfr99-202ENSMUST00000216328 1778 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.4
Trim47Q8C0E3 Chrm3-201ENSMUST00000063093 1770 ntAPPRIS P1 BASIC6.34□□□□□ -1.4
Trim47Q8C0E3 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC6.34□□□□□ -1.4
Trim47Q8C0E3 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.4
Trim47Q8C0E3 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Trim47Q8C0E3 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Trim47Q8C0E3 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC6.33□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 135.7 ms