Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Nfia-201ENSMUST00000052018 9249 ntTSL 5 BASIC6.04□□□□□ -1.44
Trim56Q80VI1 Tubal3-201ENSMUST00000021639 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Trim56Q80VI1 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Trim56Q80VI1 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Trim56Q80VI1 Gm19084-201ENSMUST00000222939 1762 ntBASIC6.03□□□□□ -1.44
Trim56Q80VI1 Fus-202ENSMUST00000079045 2623 ntBASIC6.03□□□□□ -1.44
Trim56Q80VI1 Vmn1r35-202ENSMUST00000227346 1854 ntBASIC6.03□□□□□ -1.44
Trim56Q80VI1 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC6.03□□□□□ -1.44
Trim56Q80VI1 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Trim56Q80VI1 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
Trim56Q80VI1 Gm11020-201ENSMUST00000109447 186 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Trim56Q80VI1 Gm12423-201ENSMUST00000118334 135 ntBASIC6.03□□□□□ -1.44
Trim56Q80VI1 Gm12515-201ENSMUST00000120116 361 ntBASIC6.03□□□□□ -1.44
Trim56Q80VI1 Gm14919-201ENSMUST00000120839 390 ntBASIC6.03□□□□□ -1.44
Trim56Q80VI1 Gm13220-201ENSMUST00000121535 508 ntBASIC6.03□□□□□ -1.44
Trim56Q80VI1 Gm16094-201ENSMUST00000162784 427 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Trim56Q80VI1 Gm17023-201ENSMUST00000165885 448 ntTSL 2 BASIC6.03□□□□□ -1.44
Trim56Q80VI1 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC6.03□□□□□ -1.44
Trim56Q80VI1 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC6.03□□□□□ -1.44
Trim56Q80VI1 Gm23648-201ENSMUST00000180301 107 ntBASIC6.03□□□□□ -1.44
Trim56Q80VI1 Gm27820-201ENSMUST00000183628 175 ntBASIC6.03□□□□□ -1.44
Trim56Q80VI1 Gm27818-201ENSMUST00000184536 159 ntBASIC6.03□□□□□ -1.44
Trim56Q80VI1 Gm28579-201ENSMUST00000186143 369 ntBASIC6.03□□□□□ -1.44
Trim56Q80VI1 Gm6501-201ENSMUST00000187178 916 ntBASIC6.03□□□□□ -1.44
Trim56Q80VI1 Gm29038-201ENSMUST00000191543 678 ntBASIC6.03□□□□□ -1.44
Trim56Q80VI1 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Trim56Q80VI1 Gm38234-201ENSMUST00000195204 421 ntBASIC6.03□□□□□ -1.44
Trim56Q80VI1 Gm17775-201ENSMUST00000198542 258 ntBASIC6.03□□□□□ -1.44
Trim56Q80VI1 Gm33758-201ENSMUST00000199230 407 ntTSL 3 BASIC6.03□□□□□ -1.44
Trim56Q80VI1 Gm32453-201ENSMUST00000204183 456 ntBASIC6.03□□□□□ -1.44
Trim56Q80VI1 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC6.03□□□□□ -1.44
Trim56Q80VI1 Gm45049-201ENSMUST00000207586 591 ntBASIC6.03□□□□□ -1.44
Trim56Q80VI1 Gm17999-201ENSMUST00000211568 542 ntBASIC6.03□□□□□ -1.44
Trim56Q80VI1 Gm45731-201ENSMUST00000211988 1203 ntBASIC6.03□□□□□ -1.44
Trim56Q80VI1 AC162931.1-201ENSMUST00000214184 267 ntBASIC6.03□□□□□ -1.44
Trim56Q80VI1 Ear14-201ENSMUST00000049559 468 ntBASIC6.03□□□□□ -1.44
Trim56Q80VI1 H2al3-201ENSMUST00000057113 553 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Trim56Q80VI1 Olfr98-201ENSMUST00000080759 1039 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Trim56Q80VI1 Gm23506-201ENSMUST00000083077 107 ntBASIC6.03□□□□□ -1.44
Trim56Q80VI1 Mir31-201ENSMUST00000083474 106 ntBASIC6.03□□□□□ -1.44
Trim56Q80VI1 Snord38a-201ENSMUST00000083746 71 ntBASIC6.03□□□□□ -1.44
Trim56Q80VI1 Gm23733-201ENSMUST00000083750 106 ntBASIC6.03□□□□□ -1.44
Trim56Q80VI1 Clca4b-201ENSMUST00000098549 2997 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Trim56Q80VI1 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC6.03□□□□□ -1.44
Trim56Q80VI1 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC6.03□□□□□ -1.44
Trim56Q80VI1 Olfr1056-202ENSMUST00000216547 2213 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Trim56Q80VI1 Gm13340-201ENSMUST00000117219 1545 ntBASIC6.03□□□□□ -1.44
Trim56Q80VI1 AC134596.1-201ENSMUST00000222016 1922 ntBASIC6.03□□□□□ -1.44
Trim56Q80VI1 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Trim56Q80VI1 Vmn2r77-201ENSMUST00000164996 2565 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Trim56Q80VI1 Ros1-201ENSMUST00000020045 7401 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Trim56Q80VI1 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.44
Trim56Q80VI1 Cd33-203ENSMUST00000205503 5728 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
Trim56Q80VI1 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Trim56Q80VI1 Gm19514-201ENSMUST00000206856 4489 ntBASIC6.02□□□□□ -1.45
Trim56Q80VI1 Gm21704-201ENSMUST00000169382 1573 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Trim56Q80VI1 Rbmy-202ENSMUST00000171534 1573 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Trim56Q80VI1 Gm21708-202ENSMUST00000188091 1573 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Trim56Q80VI1 Gm42728-201ENSMUST00000202644 1552 ntBASIC6.02□□□□□ -1.45
Trim56Q80VI1 Gm44625-201ENSMUST00000207838 1561 ntBASIC6.02□□□□□ -1.45
Trim56Q80VI1 Zfp182-201ENSMUST00000040628 2487 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Trim56Q80VI1 Olfr1308-202ENSMUST00000207560 2093 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
Trim56Q80VI1 Gm29112-201ENSMUST00000188962 3487 ntBASIC6.02□□□□□ -1.45
Trim56Q80VI1 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC6.02□□□□□ -1.45
Trim56Q80VI1 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC6.02□□□□□ -1.45
Trim56Q80VI1 Gm14292-201ENSMUST00000118761 456 ntBASIC6.02□□□□□ -1.45
Trim56Q80VI1 Gm14563-201ENSMUST00000120571 354 ntBASIC6.02□□□□□ -1.45
Trim56Q80VI1 Clec2f-201ENSMUST00000121051 374 ntBASIC6.02□□□□□ -1.45
Trim56Q80VI1 Gm13368-201ENSMUST00000122443 430 ntBASIC6.02□□□□□ -1.45
Trim56Q80VI1 Gm22480-201ENSMUST00000122568 128 ntBASIC6.02□□□□□ -1.45
Trim56Q80VI1 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC6.02□□□□□ -1.45
Trim56Q80VI1 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC6.02□□□□□ -1.45
Trim56Q80VI1 Gm16064-201ENSMUST00000154997 464 ntTSL 2 BASIC6.02□□□□□ -1.45
Trim56Q80VI1 Gm25907-201ENSMUST00000158486 125 ntBASIC6.02□□□□□ -1.45
Trim56Q80VI1 Gm22668-201ENSMUST00000158716 260 ntBASIC6.02□□□□□ -1.45
Trim56Q80VI1 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Trim56Q80VI1 Gm26954-201ENSMUST00000182106 622 ntTSL 3 BASIC6.02□□□□□ -1.45
Trim56Q80VI1 Gm28468-201ENSMUST00000188536 615 ntBASIC6.02□□□□□ -1.45
Trim56Q80VI1 Gm28835-202ENSMUST00000189206 543 ntTSL 3 BASIC6.02□□□□□ -1.45
Trim56Q80VI1 C4bp-ps1-201ENSMUST00000189393 706 ntBASIC6.02□□□□□ -1.45
Trim56Q80VI1 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC6.02□□□□□ -1.45
Trim56Q80VI1 Gm45171-201ENSMUST00000206360 736 ntBASIC6.02□□□□□ -1.45
Trim56Q80VI1 Gm45185-201ENSMUST00000207556 404 ntBASIC6.02□□□□□ -1.45
Trim56Q80VI1 Gm7380-201ENSMUST00000211599 466 ntBASIC6.02□□□□□ -1.45
Trim56Q80VI1 Gm45439-201ENSMUST00000211723 359 ntBASIC6.02□□□□□ -1.45
Trim56Q80VI1 AL669916.3-201ENSMUST00000213855 94 ntBASIC6.02□□□□□ -1.45
Trim56Q80VI1 AL669916.6-201ENSMUST00000214610 94 ntBASIC6.02□□□□□ -1.45
Trim56Q80VI1 Gm18903-201ENSMUST00000215343 480 ntBASIC6.02□□□□□ -1.45
Trim56Q80VI1 AL669916.4-201ENSMUST00000215976 94 ntBASIC6.02□□□□□ -1.45
Trim56Q80VI1 AL669916.1-201ENSMUST00000217640 94 ntBASIC6.02□□□□□ -1.45
Trim56Q80VI1 AC157515.1-201ENSMUST00000220953 450 ntBASIC6.02□□□□□ -1.45
Trim56Q80VI1 Gm7753-201ENSMUST00000221007 867 ntBASIC6.02□□□□□ -1.45
Trim56Q80VI1 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC6.02□□□□□ -1.45
Trim56Q80VI1 Gm7040-201ENSMUST00000223271 443 ntBASIC6.02□□□□□ -1.45
Trim56Q80VI1 AC154305.3-201ENSMUST00000224661 552 ntBASIC6.02□□□□□ -1.45
Trim56Q80VI1 AC241593.2-201ENSMUST00000225099 510 ntBASIC6.02□□□□□ -1.45
Trim56Q80VI1 AC161269.1-201ENSMUST00000228426 318 ntBASIC6.02□□□□□ -1.45
Trim56Q80VI1 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Trim56Q80VI1 Gm7808-201ENSMUST00000082002 387 ntBASIC6.02□□□□□ -1.45
Trim56Q80VI1 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC6.02□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 91.8 ms