Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Trim58Q5NCC9 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Trim58Q5NCC9 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC4.64□□□□□ -1.67
Trim58Q5NCC9 Gm7219-201ENSMUST00000119619 297 ntBASIC4.64□□□□□ -1.67
Trim58Q5NCC9 Gm13687-201ENSMUST00000119857 282 ntBASIC4.64□□□□□ -1.67
Trim58Q5NCC9 Rpl27-ps2-201ENSMUST00000120378 399 ntBASIC4.64□□□□□ -1.67
Trim58Q5NCC9 Gm13459-201ENSMUST00000121558 646 ntBASIC4.64□□□□□ -1.67
Trim58Q5NCC9 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Trim58Q5NCC9 Olfr1177-ps-201ENSMUST00000137895 921 ntAPPRIS ALT2 BASIC4.64□□□□□ -1.67
Trim58Q5NCC9 Gm23098-201ENSMUST00000157552 299 ntBASIC4.64□□□□□ -1.67
Trim58Q5NCC9 Gm26355-201ENSMUST00000158220 105 ntBASIC4.64□□□□□ -1.67
Trim58Q5NCC9 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC4.64□□□□□ -1.67
Trim58Q5NCC9 Gm24561-201ENSMUST00000175182 95 ntBASIC4.64□□□□□ -1.67
Trim58Q5NCC9 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC4.64□□□□□ -1.67
Trim58Q5NCC9 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Trim58Q5NCC9 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC4.64□□□□□ -1.67
Trim58Q5NCC9 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC4.64□□□□□ -1.67
Trim58Q5NCC9 Gm4035-201ENSMUST00000189445 399 ntTSL 3 BASIC4.64□□□□□ -1.67
Trim58Q5NCC9 Gm43765-201ENSMUST00000196303 893 ntBASIC4.64□□□□□ -1.67
Trim58Q5NCC9 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC4.64□□□□□ -1.67
Trim58Q5NCC9 Trdv3-201ENSMUST00000198551 309 ntBASIC4.64□□□□□ -1.67
Trim58Q5NCC9 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC4.64□□□□□ -1.67
Trim58Q5NCC9 Gm44475-201ENSMUST00000204041 424 ntBASIC4.64□□□□□ -1.67
Trim58Q5NCC9 Gm8679-201ENSMUST00000210651 1036 ntBASIC4.64□□□□□ -1.67
Trim58Q5NCC9 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Trim58Q5NCC9 Gm17872-201ENSMUST00000222550 532 ntBASIC4.64□□□□□ -1.67
Trim58Q5NCC9 Olfr178-201ENSMUST00000058564 960 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Trim58Q5NCC9 Gm25800-201ENSMUST00000082636 134 ntBASIC4.64□□□□□ -1.67
Trim58Q5NCC9 Klra7-203ENSMUST00000088011 921 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
Trim58Q5NCC9 Gm44164-201ENSMUST00000203605 2561 ntBASIC4.64□□□□□ -1.67
Trim58Q5NCC9 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Trim58Q5NCC9 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Trim58Q5NCC9 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Trim58Q5NCC9 Gm42537-201ENSMUST00000198260 2574 ntBASIC4.63□□□□□ -1.67
Trim58Q5NCC9 Gm37114-201ENSMUST00000195065 1804 ntBASIC4.63□□□□□ -1.67
Trim58Q5NCC9 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Trim58Q5NCC9 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Trim58Q5NCC9 Gm42728-201ENSMUST00000202644 1552 ntBASIC4.63□□□□□ -1.67
Trim58Q5NCC9 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Trim58Q5NCC9 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC4.63□□□□□ -1.67
Trim58Q5NCC9 Gm12122-201ENSMUST00000124503 454 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Trim58Q5NCC9 Gm5924-201ENSMUST00000132554 871 ntBASIC4.63□□□□□ -1.67
Trim58Q5NCC9 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Trim58Q5NCC9 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC4.63□□□□□ -1.67
Trim58Q5NCC9 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC4.63□□□□□ -1.67
Trim58Q5NCC9 Gm3454-201ENSMUST00000185571 412 ntBASIC4.63□□□□□ -1.67
Trim58Q5NCC9 Gm19774-201ENSMUST00000190667 114 ntBASIC4.63□□□□□ -1.67
Trim58Q5NCC9 Gm37111-201ENSMUST00000193250 634 ntBASIC4.63□□□□□ -1.67
Trim58Q5NCC9 Gm30717-201ENSMUST00000206549 494 ntTSL 5 BASIC4.63□□□□□ -1.67
Trim58Q5NCC9 4930470O06Rik-201ENSMUST00000209438 662 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Trim58Q5NCC9 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Trim58Q5NCC9 AC167669.1-201ENSMUST00000224932 384 ntBASIC4.63□□□□□ -1.67
Trim58Q5NCC9 Olfr1480-201ENSMUST00000072219 948 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Trim58Q5NCC9 Olfr725-201ENSMUST00000089844 1110 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Trim58Q5NCC9 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Trim58Q5NCC9 Gm904-201ENSMUST00000099519 649 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Trim58Q5NCC9 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Trim58Q5NCC9 Vmn2r-ps82-201ENSMUST00000174222 1641 ntBASIC4.63□□□□□ -1.67
Trim58Q5NCC9 Gm37742-201ENSMUST00000193263 3979 ntBASIC4.63□□□□□ -1.67
Trim58Q5NCC9 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Trim58Q5NCC9 Gm43834-201ENSMUST00000197097 4830 ntBASIC4.63□□□□□ -1.67
Trim58Q5NCC9 Olfr1308-202ENSMUST00000207560 2093 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
Trim58Q5NCC9 Gm336-201ENSMUST00000186376 1480 ntBASIC4.62□□□□□ -1.67
Trim58Q5NCC9 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Trim58Q5NCC9 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Trim58Q5NCC9 Gm26418-201ENSMUST00000104275 137 ntBASIC4.62□□□□□ -1.67
Trim58Q5NCC9 Gm14570-201ENSMUST00000119444 391 ntBASIC4.62□□□□□ -1.67
Trim58Q5NCC9 Gm5942-201ENSMUST00000120046 439 ntBASIC4.62□□□□□ -1.67
Trim58Q5NCC9 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC4.62□□□□□ -1.67
Trim58Q5NCC9 Gm10292-201ENSMUST00000183142 581 ntBASIC4.62□□□□□ -1.67
Trim58Q5NCC9 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC4.62□□□□□ -1.67
Trim58Q5NCC9 Gm7967-203ENSMUST00000191409 1049 ntTSL 5 BASIC4.62□□□□□ -1.67
Trim58Q5NCC9 Gm37857-201ENSMUST00000191784 1199 ntBASIC4.62□□□□□ -1.67
Trim58Q5NCC9 Gm44343-201ENSMUST00000196702 90 ntBASIC4.62□□□□□ -1.67
Trim58Q5NCC9 Mir129b-201ENSMUST00000197461 65 ntBASIC4.62□□□□□ -1.67
Trim58Q5NCC9 Gm2142-201ENSMUST00000197899 589 ntBASIC4.62□□□□□ -1.67
Trim58Q5NCC9 Gm42814-201ENSMUST00000199370 460 ntBASIC4.62□□□□□ -1.67
Trim58Q5NCC9 Gm45608-201ENSMUST00000210948 389 ntBASIC4.62□□□□□ -1.67
Trim58Q5NCC9 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC4.62□□□□□ -1.67
Trim58Q5NCC9 Gm5917-201ENSMUST00000217638 721 ntBASIC4.62□□□□□ -1.67
Trim58Q5NCC9 AC158631.2-201ENSMUST00000219999 478 ntBASIC4.62□□□□□ -1.67
Trim58Q5NCC9 AC153522.1-201ENSMUST00000220047 1090 ntBASIC4.62□□□□□ -1.67
Trim58Q5NCC9 AC131100.2-201ENSMUST00000227701 998 ntBASIC4.62□□□□□ -1.67
Trim58Q5NCC9 Gm23058-201ENSMUST00000093703 107 ntBASIC4.62□□□□□ -1.67
Trim58Q5NCC9 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
Trim58Q5NCC9 Gm37064-201ENSMUST00000193851 2231 ntBASIC4.62□□□□□ -1.67
Trim58Q5NCC9 Olfr1318-205ENSMUST00000217533 3747 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Trim58Q5NCC9 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Trim58Q5NCC9 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
Trim58Q5NCC9 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC4.61□□□□□ -1.67
Trim58Q5NCC9 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
Trim58Q5NCC9 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
Trim58Q5NCC9 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Trim58Q5NCC9 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Trim58Q5NCC9 Pigp-201ENSMUST00000113905 758 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Trim58Q5NCC9 Gm6592-201ENSMUST00000115563 507 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Trim58Q5NCC9 Gm14103-201ENSMUST00000119075 366 ntBASIC4.61□□□□□ -1.67
Trim58Q5NCC9 Gm6797-201ENSMUST00000119440 512 ntBASIC4.61□□□□□ -1.67
Trim58Q5NCC9 Gm11866-201ENSMUST00000120209 335 ntBASIC4.61□□□□□ -1.67
Trim58Q5NCC9 Gm12578-201ENSMUST00000121244 417 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms