Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Gm6510-201ENSMUST00000195916 574 ntBASIC5.9□□□□□ -1.47
Ccdc88bQ4QRL3 Gm45554-202ENSMUST00000210964 1090 ntTSL 5 BASIC5.9□□□□□ -1.47
Ccdc88bQ4QRL3 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
Ccdc88bQ4QRL3 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
Ccdc88bQ4QRL3 Gm37064-201ENSMUST00000193851 2231 ntBASIC5.89□□□□□ -1.47
Ccdc88bQ4QRL3 AC104897.1-201ENSMUST00000222638 3628 ntBASIC5.89□□□□□ -1.47
Ccdc88bQ4QRL3 Gabrb1-201ENSMUST00000031122 13737 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ccdc88bQ4QRL3 Gm38706-201ENSMUST00000182397 2617 ntBASIC5.89□□□□□ -1.47
Ccdc88bQ4QRL3 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ccdc88bQ4QRL3 AC153522.2-201ENSMUST00000218389 3853 ntBASIC5.89□□□□□ -1.47
Ccdc88bQ4QRL3 Gm14014-201ENSMUST00000156718 2717 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Ccdc88bQ4QRL3 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Ccdc88bQ4QRL3 AC131068.3-201ENSMUST00000228438 1456 ntBASIC5.89□□□□□ -1.47
Ccdc88bQ4QRL3 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Ccdc88bQ4QRL3 Gm15180-201ENSMUST00000117745 492 ntBASIC5.89□□□□□ -1.47
Ccdc88bQ4QRL3 Gm11923-201ENSMUST00000118135 508 ntBASIC5.89□□□□□ -1.47
Ccdc88bQ4QRL3 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC5.89□□□□□ -1.47
Ccdc88bQ4QRL3 n-R5s45-201ENSMUST00000122592 110 ntBASIC5.89□□□□□ -1.47
Ccdc88bQ4QRL3 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC5.89□□□□□ -1.47
Ccdc88bQ4QRL3 Gm23591-201ENSMUST00000157663 286 ntBASIC5.89□□□□□ -1.47
Ccdc88bQ4QRL3 Gm25519-201ENSMUST00000158392 127 ntBASIC5.89□□□□□ -1.47
Ccdc88bQ4QRL3 Gm5829-201ENSMUST00000191383 351 ntBASIC5.89□□□□□ -1.47
Ccdc88bQ4QRL3 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC5.89□□□□□ -1.47
Ccdc88bQ4QRL3 Olfr1492-ps1-201ENSMUST00000207071 865 ntBASIC5.89□□□□□ -1.47
Ccdc88bQ4QRL3 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC5.89□□□□□ -1.47
Ccdc88bQ4QRL3 AC154738.4-201ENSMUST00000228310 414 ntBASIC5.89□□□□□ -1.47
Ccdc88bQ4QRL3 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ccdc88bQ4QRL3 Gm2710-201ENSMUST00000073196 603 ntBASIC5.89□□□□□ -1.47
Ccdc88bQ4QRL3 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Ccdc88bQ4QRL3 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ccdc88bQ4QRL3 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Ccdc88bQ4QRL3 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Ccdc88bQ4QRL3 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Ccdc88bQ4QRL3 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ccdc88bQ4QRL3 Has2-201ENSMUST00000050544 4237 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ccdc88bQ4QRL3 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Ccdc88bQ4QRL3 Gm14886-201ENSMUST00000117208 2629 ntBASIC5.88□□□□□ -1.47
Ccdc88bQ4QRL3 Klhl15-204ENSMUST00000113915 6241 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ccdc88bQ4QRL3 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ccdc88bQ4QRL3 Igsf10-201ENSMUST00000039419 10084 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Ccdc88bQ4QRL3 Gm12358-201ENSMUST00000121842 520 ntBASIC5.88□□□□□ -1.47
Ccdc88bQ4QRL3 Gm24380-201ENSMUST00000122696 324 ntBASIC5.88□□□□□ -1.47
Ccdc88bQ4QRL3 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC5.88□□□□□ -1.47
Ccdc88bQ4QRL3 Gm26214-201ENSMUST00000158581 107 ntBASIC5.88□□□□□ -1.47
Ccdc88bQ4QRL3 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ccdc88bQ4QRL3 Gm37355-201ENSMUST00000193345 606 ntBASIC5.88□□□□□ -1.47
Ccdc88bQ4QRL3 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC5.88□□□□□ -1.47
Ccdc88bQ4QRL3 Olfr1092-ps1-201ENSMUST00000216544 398 ntBASIC5.88□□□□□ -1.47
Ccdc88bQ4QRL3 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ccdc88bQ4QRL3 Olfr164-201ENSMUST00000056727 1095 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Ccdc88bQ4QRL3 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ccdc88bQ4QRL3 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ccdc88bQ4QRL3 Vmn2r104-201ENSMUST00000168050 2583 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Ccdc88bQ4QRL3 Gm9432-201ENSMUST00000117810 759 ntBASIC5.87□□□□□ -1.47
Ccdc88bQ4QRL3 Gm6274-201ENSMUST00000118173 797 ntBASIC5.87□□□□□ -1.47
Ccdc88bQ4QRL3 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC5.87□□□□□ -1.47
Ccdc88bQ4QRL3 Gm22908-201ENSMUST00000177620 110 ntBASIC5.87□□□□□ -1.47
Ccdc88bQ4QRL3 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC5.87□□□□□ -1.47
Ccdc88bQ4QRL3 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC5.87□□□□□ -1.47
Ccdc88bQ4QRL3 Gm44927-201ENSMUST00000207573 716 ntBASIC5.87□□□□□ -1.47
Ccdc88bQ4QRL3 AC159256.1-201ENSMUST00000224298 1039 ntBASIC5.87□□□□□ -1.47
Ccdc88bQ4QRL3 Olfr816-201ENSMUST00000071605 939 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Ccdc88bQ4QRL3 Gm24533-201ENSMUST00000083138 196 ntBASIC5.87□□□□□ -1.47
Ccdc88bQ4QRL3 Gm45809-201ENSMUST00000211661 3894 ntBASIC5.87□□□□□ -1.47
Ccdc88bQ4QRL3 Gm43923-201ENSMUST00000203992 2911 ntBASIC5.87□□□□□ -1.47
Ccdc88bQ4QRL3 Macf1-205ENSMUST00000106220 17608 ntTSL 5 BASIC5.87□□□□□ -1.47
Ccdc88bQ4QRL3 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC5.87□□□□□ -1.47
Ccdc88bQ4QRL3 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Ccdc88bQ4QRL3 Olfr1302-203ENSMUST00000215244 2729 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Ccdc88bQ4QRL3 Gm10811-201ENSMUST00000221985 2448 ntBASIC5.86□□□□□ -1.47
Ccdc88bQ4QRL3 4930519E07Rik-201ENSMUST00000200907 1665 ntBASIC5.86□□□□□ -1.47
Ccdc88bQ4QRL3 Dst-215ENSMUST00000185269 16340 ntTSL 5 BASIC5.86□□□□□ -1.47
Ccdc88bQ4QRL3 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Ccdc88bQ4QRL3 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Ccdc88bQ4QRL3 Gm7308-201ENSMUST00000121087 447 ntBASIC5.86□□□□□ -1.47
Ccdc88bQ4QRL3 Gm16064-201ENSMUST00000154997 464 ntTSL 2 BASIC5.86□□□□□ -1.47
Ccdc88bQ4QRL3 Gm23231-201ENSMUST00000157299 104 ntBASIC5.86□□□□□ -1.47
Ccdc88bQ4QRL3 Gm24138-201ENSMUST00000157572 114 ntBASIC5.86□□□□□ -1.47
Ccdc88bQ4QRL3 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC5.86□□□□□ -1.47
Ccdc88bQ4QRL3 Gm18597-201ENSMUST00000209519 694 ntBASIC5.86□□□□□ -1.47
Ccdc88bQ4QRL3 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC5.86□□□□□ -1.47
Ccdc88bQ4QRL3 Gm41002-201ENSMUST00000222479 312 ntTSL 3 BASIC5.86□□□□□ -1.47
Ccdc88bQ4QRL3 Zfp788-201ENSMUST00000045720 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Ccdc88bQ4QRL3 Vmn2r57-201ENSMUST00000165029 2592 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Ccdc88bQ4QRL3 AC155830.1-201ENSMUST00000220050 3836 ntBASIC5.85□□□□□ -1.47
Ccdc88bQ4QRL3 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc88bQ4QRL3 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC5.85□□□□□ -1.47
Ccdc88bQ4QRL3 A730009L09Rik-201ENSMUST00000209558 2512 ntAPPRIS P5 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc88bQ4QRL3 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc88bQ4QRL3 Gm9157-201ENSMUST00000117673 225 ntBASIC5.85□□□□□ -1.47
Ccdc88bQ4QRL3 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC5.85□□□□□ -1.47
Ccdc88bQ4QRL3 Gm5762-201ENSMUST00000119204 258 ntBASIC5.85□□□□□ -1.47
Ccdc88bQ4QRL3 Gm26020-201ENSMUST00000122729 183 ntBASIC5.85□□□□□ -1.47
Ccdc88bQ4QRL3 Olfr1177-ps-201ENSMUST00000137895 921 ntAPPRIS ALT2 BASIC5.85□□□□□ -1.47
Ccdc88bQ4QRL3 Gm18900-201ENSMUST00000193218 584 ntBASIC5.85□□□□□ -1.47
Ccdc88bQ4QRL3 Gm32447-201ENSMUST00000194265 697 ntBASIC5.85□□□□□ -1.47
Ccdc88bQ4QRL3 Gm45579-201ENSMUST00000209367 887 ntTSL 5 BASIC5.85□□□□□ -1.47
Ccdc88bQ4QRL3 Gm19232-201ENSMUST00000211621 652 ntBASIC5.85□□□□□ -1.47
Ccdc88bQ4QRL3 Gm7948-201ENSMUST00000212607 844 ntBASIC5.85□□□□□ -1.47
Ccdc88bQ4QRL3 Gm9370-201ENSMUST00000222787 609 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 116.4 ms