Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 CT010444.1-201ENSMUST00000219963 3845 ntBASIC4.02□□□□□ -1.77
Upf3bQ3ULL6 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Upf3bQ3ULL6 Vmn1r202-201ENSMUST00000078642 909 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Upf3bQ3ULL6 Gm24319-201ENSMUST00000083389 107 ntBASIC4.02□□□□□ -1.77
Upf3bQ3ULL6 Cd226-202ENSMUST00000097496 911 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Upf3bQ3ULL6 Gm26853-201ENSMUST00000180757 4010 ntTSL 5 BASIC4.02□□□□□ -1.77
Upf3bQ3ULL6 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Upf3bQ3ULL6 Olfr510-203ENSMUST00000216331 3101 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Upf3bQ3ULL6 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Upf3bQ3ULL6 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Upf3bQ3ULL6 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Upf3bQ3ULL6 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Upf3bQ3ULL6 Gm43443-201ENSMUST00000202337 2393 ntBASIC4.02□□□□□ -1.77
Upf3bQ3ULL6 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Upf3bQ3ULL6 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC4.01□□□□□ -1.77
Upf3bQ3ULL6 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
Upf3bQ3ULL6 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Upf3bQ3ULL6 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Upf3bQ3ULL6 Gm11372-201ENSMUST00000117348 570 ntBASIC4.01□□□□□ -1.77
Upf3bQ3ULL6 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC4.01□□□□□ -1.77
Upf3bQ3ULL6 Gm13788-201ENSMUST00000120767 601 ntBASIC4.01□□□□□ -1.77
Upf3bQ3ULL6 Gm13092-201ENSMUST00000136346 260 ntBASIC4.01□□□□□ -1.77
Upf3bQ3ULL6 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC4.01□□□□□ -1.77
Upf3bQ3ULL6 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Upf3bQ3ULL6 2610001J05Rik-202ENSMUST00000155856 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Upf3bQ3ULL6 Gm23781-201ENSMUST00000157940 308 ntBASIC4.01□□□□□ -1.77
Upf3bQ3ULL6 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
Upf3bQ3ULL6 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Upf3bQ3ULL6 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
Upf3bQ3ULL6 Gm26746-201ENSMUST00000181722 487 ntBASIC4.01□□□□□ -1.77
Upf3bQ3ULL6 Mir6398-201ENSMUST00000184541 102 ntBASIC4.01□□□□□ -1.77
Upf3bQ3ULL6 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Upf3bQ3ULL6 Gm43155-201ENSMUST00000202661 494 ntBASIC4.01□□□□□ -1.77
Upf3bQ3ULL6 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC4.01□□□□□ -1.77
Upf3bQ3ULL6 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC4.01□□□□□ -1.77
Upf3bQ3ULL6 CT030194.1-201ENSMUST00000225507 532 ntBASIC4.01□□□□□ -1.77
Upf3bQ3ULL6 AC133189.2-201ENSMUST00000228527 392 ntBASIC4.01□□□□□ -1.77
Upf3bQ3ULL6 AC155167.1-201ENSMUST00000228931 614 ntBASIC4.01□□□□□ -1.77
Upf3bQ3ULL6 Olfr154-201ENSMUST00000099918 1079 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Upf3bQ3ULL6 Olfr172-202ENSMUST00000214139 1778 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Upf3bQ3ULL6 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Upf3bQ3ULL6 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
Upf3bQ3ULL6 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Upf3bQ3ULL6 Gm8744-201ENSMUST00000204475 3581 ntBASIC4□□□□□ -1.77
Upf3bQ3ULL6 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC4□□□□□ -1.77
Upf3bQ3ULL6 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Upf3bQ3ULL6 Serpinb9e-201ENSMUST00000071873 1923 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Upf3bQ3ULL6 Gm25169-201ENSMUST00000104190 129 ntBASIC4□□□□□ -1.77
Upf3bQ3ULL6 Olfr596-201ENSMUST00000104880 939 ntAPPRIS P1 BASIC4□□□□□ -1.77
Upf3bQ3ULL6 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Upf3bQ3ULL6 Gm11923-201ENSMUST00000118135 508 ntBASIC4□□□□□ -1.77
Upf3bQ3ULL6 Gm14656-201ENSMUST00000120342 502 ntBASIC4□□□□□ -1.77
Upf3bQ3ULL6 Gm26276-201ENSMUST00000157099 109 ntBASIC4□□□□□ -1.77
Upf3bQ3ULL6 Gm23591-201ENSMUST00000157663 286 ntBASIC4□□□□□ -1.77
Upf3bQ3ULL6 Gm2389-201ENSMUST00000160487 189 ntBASIC4□□□□□ -1.77
Upf3bQ3ULL6 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC4□□□□□ -1.77
Upf3bQ3ULL6 Vmn1r-ps67-201ENSMUST00000173843 691 ntBASIC4□□□□□ -1.77
Upf3bQ3ULL6 Gm20693-201ENSMUST00000177431 211 ntBASIC4□□□□□ -1.77
Upf3bQ3ULL6 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC4□□□□□ -1.77
Upf3bQ3ULL6 Gm2617-201ENSMUST00000185690 1066 ntBASIC4□□□□□ -1.77
Upf3bQ3ULL6 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC4□□□□□ -1.77
Upf3bQ3ULL6 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC4□□□□□ -1.77
Upf3bQ3ULL6 Gm7967-203ENSMUST00000191409 1049 ntTSL 5 BASIC4□□□□□ -1.77
Upf3bQ3ULL6 Gm18445-201ENSMUST00000195502 774 ntBASIC4□□□□□ -1.77
Upf3bQ3ULL6 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC4□□□□□ -1.77
Upf3bQ3ULL6 Gm30790-201ENSMUST00000208256 958 ntTSL 1 (best) BASIC4□□□□□ -1.77
Upf3bQ3ULL6 Gm3829-201ENSMUST00000222362 619 ntBASIC4□□□□□ -1.77
Upf3bQ3ULL6 Gm19786-201ENSMUST00000222589 580 ntBASIC4□□□□□ -1.77
Upf3bQ3ULL6 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Upf3bQ3ULL6 Olfr357-201ENSMUST00000069578 1092 ntAPPRIS P1 BASIC4□□□□□ -1.77
Upf3bQ3ULL6 Olfr603-201ENSMUST00000071844 939 ntAPPRIS P1 BASIC4□□□□□ -1.77
Upf3bQ3ULL6 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC4□□□□□ -1.77
Upf3bQ3ULL6 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
Upf3bQ3ULL6 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC4□□□□□ -1.77
Upf3bQ3ULL6 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Upf3bQ3ULL6 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
Upf3bQ3ULL6 Gm16294-201ENSMUST00000070382 1459 ntTSL 2 BASIC3.99□□□□□ -1.77
Upf3bQ3ULL6 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Upf3bQ3ULL6 Gm12467-201ENSMUST00000117625 745 ntBASIC3.99□□□□□ -1.77
Upf3bQ3ULL6 Gm11746-201ENSMUST00000119843 821 ntBASIC3.99□□□□□ -1.77
Upf3bQ3ULL6 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Upf3bQ3ULL6 Gm15926-201ENSMUST00000120492 550 ntBASIC3.99□□□□□ -1.77
Upf3bQ3ULL6 Gm13973-201ENSMUST00000121371 894 ntBASIC3.99□□□□□ -1.77
Upf3bQ3ULL6 Gm22480-201ENSMUST00000122568 128 ntBASIC3.99□□□□□ -1.77
Upf3bQ3ULL6 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC3.99□□□□□ -1.77
Upf3bQ3ULL6 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC3.99□□□□□ -1.77
Upf3bQ3ULL6 Rfpl4b-201ENSMUST00000179279 1054 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Upf3bQ3ULL6 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC3.99□□□□□ -1.77
Upf3bQ3ULL6 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
Upf3bQ3ULL6 Gm18900-201ENSMUST00000193218 584 ntBASIC3.99□□□□□ -1.77
Upf3bQ3ULL6 Gm28724-202ENSMUST00000194218 295 ntBASIC3.99□□□□□ -1.77
Upf3bQ3ULL6 Gm19039-201ENSMUST00000204363 575 ntBASIC3.99□□□□□ -1.77
Upf3bQ3ULL6 Gm4501-201ENSMUST00000207330 551 ntBASIC3.99□□□□□ -1.77
Upf3bQ3ULL6 Gm4558-201ENSMUST00000207886 521 ntBASIC3.99□□□□□ -1.77
Upf3bQ3ULL6 Gm17989-201ENSMUST00000211543 412 ntBASIC3.99□□□□□ -1.77
Upf3bQ3ULL6 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Upf3bQ3ULL6 CT010506.3-201ENSMUST00000223699 410 ntBASIC3.99□□□□□ -1.77
Upf3bQ3ULL6 AC167013.2-202ENSMUST00000227035 333 ntBASIC3.99□□□□□ -1.77
Upf3bQ3ULL6 Olfr780-201ENSMUST00000063168 1025 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Upf3bQ3ULL6 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 93.1 ms