Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col9a1Q05722 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC6.31□□□□□ -1.4
Col9a1Q05722 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC6.31□□□□□ -1.4
Col9a1Q05722 Gm25278-201ENSMUST00000157267 120 ntBASIC6.31□□□□□ -1.4
Col9a1Q05722 Gm25486-201ENSMUST00000158726 63 ntBASIC6.31□□□□□ -1.4
Col9a1Q05722 Gm23197-201ENSMUST00000158809 112 ntBASIC6.31□□□□□ -1.4
Col9a1Q05722 Gm18953-201ENSMUST00000175694 300 ntBASIC6.31□□□□□ -1.4
Col9a1Q05722 Gm27285-201ENSMUST00000183875 127 ntBASIC6.31□□□□□ -1.4
Col9a1Q05722 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC6.31□□□□□ -1.4
Col9a1Q05722 Gm28973-201ENSMUST00000189310 613 ntBASIC6.31□□□□□ -1.4
Col9a1Q05722 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC6.31□□□□□ -1.4
Col9a1Q05722 Gm45710-201ENSMUST00000212847 215 ntBASIC6.31□□□□□ -1.4
Col9a1Q05722 AC166902.1-201ENSMUST00000216653 517 ntBASIC6.31□□□□□ -1.4
Col9a1Q05722 AC109180.1-201ENSMUST00000218676 398 ntBASIC6.31□□□□□ -1.4
Col9a1Q05722 AC153943.1-201ENSMUST00000219312 256 ntBASIC6.31□□□□□ -1.4
Col9a1Q05722 AC154603.1-201ENSMUST00000224355 313 ntBASIC6.31□□□□□ -1.4
Col9a1Q05722 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC6.31□□□□□ -1.4
Col9a1Q05722 Akt3-203ENSMUST00000111160 4735 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col9a1Q05722 Zfp661-201ENSMUST00000077422 2765 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col9a1Q05722 Olfr992-202ENSMUST00000213749 2150 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Col9a1Q05722 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Col9a1Q05722 Zfp455-202ENSMUST00000120861 2712 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
Col9a1Q05722 Pln-201ENSMUST00000046221 2334 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col9a1Q05722 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Col9a1Q05722 Gm44620-201ENSMUST00000209183 2887 ntBASIC6.31□□□□□ -1.4
Col9a1Q05722 Gm18194-202ENSMUST00000210952 3442 ntBASIC6.31□□□□□ -1.4
Col9a1Q05722 Mtpap-201ENSMUST00000025077 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col9a1Q05722 Gm5177-202ENSMUST00000183337 3785 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Col9a1Q05722 4632404H12Rik-202ENSMUST00000195940 4671 ntBASIC6.31□□□□□ -1.4
Col9a1Q05722 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC6.3□□□□□ -1.4
Col9a1Q05722 Mrpl35-201ENSMUST00000065103 3721 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col9a1Q05722 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Col9a1Q05722 AC164437.5-201ENSMUST00000227235 4414 ntBASIC6.3□□□□□ -1.4
Col9a1Q05722 Nuf2-202ENSMUST00000111368 2405 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col9a1Q05722 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Col9a1Q05722 Hdac9-205ENSMUST00000209902 7940 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Col9a1Q05722 Vmn2r52-201ENSMUST00000164918 2559 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Col9a1Q05722 Olfr1038-ps-202ENSMUST00000216665 4530 ntTSL 3 BASIC6.3□□□□□ -1.4
Col9a1Q05722 Pde10a-208ENSMUST00000115724 3612 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Col9a1Q05722 Gm38142-201ENSMUST00000194093 3555 ntBASIC6.3□□□□□ -1.4
Col9a1Q05722 Gm43534-201ENSMUST00000197685 2853 ntBASIC6.3□□□□□ -1.4
Col9a1Q05722 Gmeb1-207ENSMUST00000168553 6523 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Col9a1Q05722 Pde1c-202ENSMUST00000114327 6821 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Col9a1Q05722 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col9a1Q05722 Gm6897-201ENSMUST00000117714 138 ntBASIC6.3□□□□□ -1.4
Col9a1Q05722 Gm11490-201ENSMUST00000118128 272 ntBASIC6.3□□□□□ -1.4
Col9a1Q05722 Gm14758-201ENSMUST00000119104 138 ntBASIC6.3□□□□□ -1.4
Col9a1Q05722 Gm15603-201ENSMUST00000119252 492 ntBASIC6.3□□□□□ -1.4
Col9a1Q05722 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Col9a1Q05722 Gm8880-201ENSMUST00000121800 454 ntBASIC6.3□□□□□ -1.4
Col9a1Q05722 Gm5123-201ENSMUST00000121905 837 ntBASIC6.3□□□□□ -1.4
Col9a1Q05722 Gm5755-201ENSMUST00000152394 837 ntBASIC6.3□□□□□ -1.4
Col9a1Q05722 Gm23557-201ENSMUST00000157820 138 ntBASIC6.3□□□□□ -1.4
Col9a1Q05722 Gm3191-201ENSMUST00000167139 346 ntBASIC6.3□□□□□ -1.4
Col9a1Q05722 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col9a1Q05722 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Col9a1Q05722 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC6.3□□□□□ -1.4
Col9a1Q05722 Gm20691-201ENSMUST00000176889 333 ntBASIC6.3□□□□□ -1.4
Col9a1Q05722 Mir6348-201ENSMUST00000183804 120 ntBASIC6.3□□□□□ -1.4
Col9a1Q05722 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC6.3□□□□□ -1.4
Col9a1Q05722 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC6.3□□□□□ -1.4
Col9a1Q05722 Trbv11-201ENSMUST00000194354 260 ntBASIC6.3□□□□□ -1.4
Col9a1Q05722 Gm4714-201ENSMUST00000203395 279 ntBASIC6.3□□□□□ -1.4
Col9a1Q05722 AC154733.1-201ENSMUST00000221126 679 ntTSL 5 BASIC6.3□□□□□ -1.4
Col9a1Q05722 AC133910.1-201ENSMUST00000228128 624 ntBASIC6.3□□□□□ -1.4
Col9a1Q05722 Gm23095-201ENSMUST00000083446 107 ntBASIC6.3□□□□□ -1.4
Col9a1Q05722 Mir342-201ENSMUST00000083502 99 ntBASIC6.3□□□□□ -1.4
Col9a1Q05722 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Col9a1Q05722 Gm8104-201ENSMUST00000168165 1761 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Col9a1Q05722 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Col9a1Q05722 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Col9a1Q05722 Gm37109-201ENSMUST00000195475 2254 ntBASIC6.3□□□□□ -1.4
Col9a1Q05722 Olfr11-202ENSMUST00000205631 3265 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
Col9a1Q05722 Ago3-201ENSMUST00000069097 15595 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col9a1Q05722 Mdc1-201ENSMUST00000082337 7335 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Col9a1Q05722 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col9a1Q05722 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col9a1Q05722 Agtpbp1-201ENSMUST00000022040 8174 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col9a1Q05722 Tcf7l2-210ENSMUST00000111657 4126 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Col9a1Q05722 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col9a1Q05722 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Col9a1Q05722 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Col9a1Q05722 Smco3-201ENSMUST00000068293 2056 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col9a1Q05722 AC137842.3-201ENSMUST00000228855 2397 ntBASIC6.29□□□□□ -1.4
Col9a1Q05722 Ide-201ENSMUST00000131070 4962 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col9a1Q05722 Stag2-203ENSMUST00000115073 6171 ntTSL 5 BASIC6.29□□□□□ -1.4
Col9a1Q05722 Olfr670-202ENSMUST00000214216 3729 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Col9a1Q05722 Scn3b-203ENSMUST00000171835 4024 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col9a1Q05722 Bmp10-201ENSMUST00000032125 4490 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col9a1Q05722 Gm23990-201ENSMUST00000117031 117 ntBASIC6.29□□□□□ -1.4
Col9a1Q05722 Gm14890-201ENSMUST00000117660 676 ntBASIC6.29□□□□□ -1.4
Col9a1Q05722 Gm14868-201ENSMUST00000117840 216 ntBASIC6.29□□□□□ -1.4
Col9a1Q05722 Gm22849-201ENSMUST00000157713 307 ntBASIC6.29□□□□□ -1.4
Col9a1Q05722 Gm25555-201ENSMUST00000158078 111 ntBASIC6.29□□□□□ -1.4
Col9a1Q05722 Pfdn5-208ENSMUST00000170627 330 ntTSL 5 BASIC6.29□□□□□ -1.4
Col9a1Q05722 Zfp790-202ENSMUST00000178162 3356 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col9a1Q05722 Mir6362-201ENSMUST00000184329 107 ntBASIC6.29□□□□□ -1.4
Col9a1Q05722 Gm28429-201ENSMUST00000188521 363 ntBASIC6.29□□□□□ -1.4
Col9a1Q05722 Gm2065-201ENSMUST00000194697 2757 ntBASIC6.29□□□□□ -1.4
Col9a1Q05722 Gm38085-201ENSMUST00000195785 3062 ntBASIC6.29□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms