Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Gm37544-201ENSMUST00000192803 174 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Usp4P35123 Gm37635-201ENSMUST00000193129 174 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Usp4P35123 Gm21809-202ENSMUST00000194072 174 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Usp4P35123 Trbv24-201ENSMUST00000194614 347 ntBASIC5.3□□□□□ -1.56
Usp4P35123 Gm38234-201ENSMUST00000195204 421 ntBASIC5.3□□□□□ -1.56
Usp4P35123 Gm43018-201ENSMUST00000198075 1275 ntBASIC5.3□□□□□ -1.56
Usp4P35123 Pvrig-ps-201ENSMUST00000199472 204 ntBASIC5.3□□□□□ -1.56
Usp4P35123 Gm44048-201ENSMUST00000204531 361 ntBASIC5.3□□□□□ -1.56
Usp4P35123 Gm18468-201ENSMUST00000207321 369 ntBASIC5.3□□□□□ -1.56
Usp4P35123 Gm18470-201ENSMUST00000207467 420 ntBASIC5.3□□□□□ -1.56
Usp4P35123 Gm18465-201ENSMUST00000207468 369 ntBASIC5.3□□□□□ -1.56
Usp4P35123 Gm18464-201ENSMUST00000207803 420 ntBASIC5.3□□□□□ -1.56
Usp4P35123 Gm18458-201ENSMUST00000207908 369 ntBASIC5.3□□□□□ -1.56
Usp4P35123 Gm30790-201ENSMUST00000208256 958 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Usp4P35123 Gm18461-201ENSMUST00000208421 420 ntBASIC5.3□□□□□ -1.56
Usp4P35123 Gm18850-201ENSMUST00000211578 388 ntBASIC5.3□□□□□ -1.56
Usp4P35123 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Usp4P35123 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC5.3□□□□□ -1.56
Usp4P35123 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC5.3□□□□□ -1.56
Usp4P35123 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC5.3□□□□□ -1.56
Usp4P35123 AC125020.2-201ENSMUST00000218894 348 ntBASIC5.3□□□□□ -1.56
Usp4P35123 AC155808.1-201ENSMUST00000219288 409 ntBASIC5.3□□□□□ -1.56
Usp4P35123 Gm2645-201ENSMUST00000223516 547 ntBASIC5.3□□□□□ -1.56
Usp4P35123 Olfr655-201ENSMUST00000057385 927 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Usp4P35123 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Usp4P35123 Olfr866-201ENSMUST00000062248 1077 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Usp4P35123 5430401F13Rik-201ENSMUST00000075020 602 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Usp4P35123 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Usp4P35123 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Usp4P35123 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Usp4P35123 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Usp4P35123 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC5.3□□□□□ -1.56
Usp4P35123 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC5.3□□□□□ -1.56
Usp4P35123 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Usp4P35123 Kcnt2-203ENSMUST00000120796 3540 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Usp4P35123 Btbd35f15-201ENSMUST00000186329 1917 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Usp4P35123 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC5.3□□□□□ -1.56
Usp4P35123 Olfr1065-202ENSMUST00000216162 2148 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
Usp4P35123 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
Usp4P35123 Iqch-204ENSMUST00000163982 3375 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
Usp4P35123 Fus-202ENSMUST00000079045 2623 ntBASIC5.29□□□□□ -1.56
Usp4P35123 Arrdc3-205ENSMUST00000161441 1908 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Usp4P35123 Olfr372-202ENSMUST00000215324 3542 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Usp4P35123 Adam7-201ENSMUST00000022640 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Usp4P35123 Gab3-203ENSMUST00000114109 2093 ntTSL 2 BASIC5.29□□□□□ -1.56
Usp4P35123 Gm6710-202ENSMUST00000109012 1665 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Usp4P35123 Gm14391-206ENSMUST00000165892 1665 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Usp4P35123 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Usp4P35123 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
Usp4P35123 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Usp4P35123 Gm13321-201ENSMUST00000117101 400 ntBASIC5.29□□□□□ -1.56
Usp4P35123 Gm14575-201ENSMUST00000117210 560 ntBASIC5.29□□□□□ -1.56
Usp4P35123 Gm14835-201ENSMUST00000119039 315 ntBASIC5.29□□□□□ -1.56
Usp4P35123 Gm11352-201ENSMUST00000119264 517 ntBASIC5.29□□□□□ -1.56
Usp4P35123 Gm12891-201ENSMUST00000119358 240 ntBASIC5.29□□□□□ -1.56
Usp4P35123 Olfr1298-201ENSMUST00000119566 939 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Usp4P35123 Rpl36a-ps4-201ENSMUST00000121019 296 ntBASIC5.29□□□□□ -1.56
Usp4P35123 Gm11254-201ENSMUST00000122368 653 ntBASIC5.29□□□□□ -1.56
Usp4P35123 Gm23837-201ENSMUST00000122656 286 ntBASIC5.29□□□□□ -1.56
Usp4P35123 Gm13773-201ENSMUST00000156693 583 ntTSL 3 BASIC5.29□□□□□ -1.56
Usp4P35123 Gm23965-201ENSMUST00000157969 142 ntBASIC5.29□□□□□ -1.56
Usp4P35123 Gm21737-201ENSMUST00000178112 664 ntBASIC5.29□□□□□ -1.56
Usp4P35123 Gm20874-201ENSMUST00000178356 663 ntBASIC5.29□□□□□ -1.56
Usp4P35123 Gm21744-201ENSMUST00000178403 662 ntBASIC5.29□□□□□ -1.56
Usp4P35123 Gm20901-201ENSMUST00000180177 664 ntBASIC5.29□□□□□ -1.56
Usp4P35123 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Usp4P35123 Mir7093-201ENSMUST00000184195 101 ntBASIC5.29□□□□□ -1.56
Usp4P35123 Gm8392-201ENSMUST00000185647 835 ntBASIC5.29□□□□□ -1.56
Usp4P35123 Gm2914-201ENSMUST00000186120 328 ntBASIC5.29□□□□□ -1.56
Usp4P35123 Gm28090-201ENSMUST00000189458 664 ntBASIC5.29□□□□□ -1.56
Usp4P35123 Gm21647-201ENSMUST00000189755 664 ntBASIC5.29□□□□□ -1.56
Usp4P35123 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Usp4P35123 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Usp4P35123 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC5.29□□□□□ -1.56
Usp4P35123 Gm9227-201ENSMUST00000194733 566 ntBASIC5.29□□□□□ -1.56
Usp4P35123 Gm37815-201ENSMUST00000195665 411 ntTSL 5 BASIC5.29□□□□□ -1.56
Usp4P35123 9330198I05Rik-201ENSMUST00000196846 1095 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Usp4P35123 Gm43513-201ENSMUST00000199779 1076 ntBASIC5.29□□□□□ -1.56
Usp4P35123 Gm45910-201ENSMUST00000212493 1003 ntBASIC5.29□□□□□ -1.56
Usp4P35123 Gm2628-201ENSMUST00000218019 426 ntBASIC5.29□□□□□ -1.56
Usp4P35123 CT025616.1-201ENSMUST00000221158 412 ntBASIC5.29□□□□□ -1.56
Usp4P35123 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC5.29□□□□□ -1.56
Usp4P35123 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Usp4P35123 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Usp4P35123 Mir338-201ENSMUST00000083666 98 ntBASIC5.29□□□□□ -1.56
Usp4P35123 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Usp4P35123 Olfr1054-201ENSMUST00000099895 939 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Usp4P35123 Spag17-204ENSMUST00000164539 7862 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Usp4P35123 Olfr1389-202ENSMUST00000216641 3707 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Usp4P35123 Gm20287-201ENSMUST00000172848 2367 ntBASIC5.29□□□□□ -1.56
Usp4P35123 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Usp4P35123 Lair1-201ENSMUST00000068865 6828 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Usp4P35123 Gm38278-201ENSMUST00000194715 1365 ntBASIC5.29□□□□□ -1.56
Usp4P35123 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Usp4P35123 Jchain-201ENSMUST00000087033 1393 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Usp4P35123 Olfr963-202ENSMUST00000215649 2203 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Usp4P35123 Zfp780b-204ENSMUST00000206685 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Usp4P35123 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Usp4P35123 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Usp4P35123 Gm14670-201ENSMUST00000117327 337 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms