Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm11975-201ENSMUST00000118772 481 ntBASIC5.96□□□□□ -1.46
Clp1Q99LI9 Gm14049-201ENSMUST00000121009 636 ntBASIC5.96□□□□□ -1.46
Clp1Q99LI9 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Clp1Q99LI9 Gm24737-201ENSMUST00000158861 100 ntBASIC5.96□□□□□ -1.46
Clp1Q99LI9 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
Clp1Q99LI9 Gm3127-201ENSMUST00000167839 997 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
Clp1Q99LI9 Gm8214-201ENSMUST00000172123 351 ntBASIC5.96□□□□□ -1.46
Clp1Q99LI9 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Clp1Q99LI9 Gm28385-201ENSMUST00000185671 292 ntBASIC5.96□□□□□ -1.46
Clp1Q99LI9 Gm28683-201ENSMUST00000187134 615 ntBASIC5.96□□□□□ -1.46
Clp1Q99LI9 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC5.96□□□□□ -1.46
Clp1Q99LI9 Gm17916-202ENSMUST00000187634 1187 ntBASIC5.96□□□□□ -1.46
Clp1Q99LI9 Gm28840-205ENSMUST00000189320 615 ntBASIC5.96□□□□□ -1.46
Clp1Q99LI9 Gm28835-203ENSMUST00000190062 615 ntBASIC5.96□□□□□ -1.46
Clp1Q99LI9 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Clp1Q99LI9 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Clp1Q99LI9 Gm37421-201ENSMUST00000193088 132 ntBASIC5.96□□□□□ -1.46
Clp1Q99LI9 Gm44373-201ENSMUST00000196112 169 ntBASIC5.96□□□□□ -1.46
Clp1Q99LI9 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Clp1Q99LI9 Gm43559-201ENSMUST00000198755 466 ntBASIC5.96□□□□□ -1.46
Clp1Q99LI9 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Clp1Q99LI9 Gm5027-201ENSMUST00000206700 375 ntBASIC5.96□□□□□ -1.46
Clp1Q99LI9 AC160635.2-201ENSMUST00000216368 734 ntTSL 5 BASIC5.96□□□□□ -1.46
Clp1Q99LI9 Nqo2-201ENSMUST00000021843 1063 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Clp1Q99LI9 Gm8785-201ENSMUST00000220259 487 ntBASIC5.96□□□□□ -1.46
Clp1Q99LI9 AC153794.2-201ENSMUST00000222650 550 ntBASIC5.96□□□□□ -1.46
Clp1Q99LI9 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Clp1Q99LI9 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC5.96□□□□□ -1.46
Clp1Q99LI9 Gm23515-201ENSMUST00000082829 107 ntBASIC5.96□□□□□ -1.46
Clp1Q99LI9 Gm26107-201ENSMUST00000083972 107 ntBASIC5.96□□□□□ -1.46
Clp1Q99LI9 Gm44440-201ENSMUST00000203139 2373 ntBASIC5.96□□□□□ -1.46
Clp1Q99LI9 AC158232.1-202ENSMUST00000218352 3343 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Clp1Q99LI9 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Clp1Q99LI9 Qser1-201ENSMUST00000117237 8973 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Clp1Q99LI9 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
Clp1Q99LI9 Nr3c2-202ENSMUST00000109911 3804 ntTSL 5 BASIC5.96□□□□□ -1.46
Clp1Q99LI9 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Clp1Q99LI9 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
Clp1Q99LI9 Pias1-202ENSMUST00000214830 2492 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Clp1Q99LI9 Olfr1115-202ENSMUST00000213513 3604 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Clp1Q99LI9 Slc24a2-204ENSMUST00000107158 10499 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Clp1Q99LI9 Olfr726-206ENSMUST00000217025 1363 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Clp1Q99LI9 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Clp1Q99LI9 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
Clp1Q99LI9 Efcab2-201ENSMUST00000027775 3580 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Clp1Q99LI9 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC5.95□□□□□ -1.46
Clp1Q99LI9 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Clp1Q99LI9 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Clp1Q99LI9 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Clp1Q99LI9 Gm9059-201ENSMUST00000118319 183 ntBASIC5.95□□□□□ -1.46
Clp1Q99LI9 Gm13082-201ENSMUST00000118877 561 ntBASIC5.95□□□□□ -1.46
Clp1Q99LI9 Gm13239-201ENSMUST00000119920 637 ntBASIC5.95□□□□□ -1.46
Clp1Q99LI9 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Clp1Q99LI9 1700123O12Rik-204ENSMUST00000146783 577 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Clp1Q99LI9 Tmem216-206ENSMUST00000154383 927 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
Clp1Q99LI9 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC5.95□□□□□ -1.46
Clp1Q99LI9 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC5.95□□□□□ -1.46
Clp1Q99LI9 Gm22290-201ENSMUST00000177655 107 ntBASIC5.95□□□□□ -1.46
Clp1Q99LI9 Gm22583-201ENSMUST00000178031 107 ntBASIC5.95□□□□□ -1.46
Clp1Q99LI9 Gm19206-201ENSMUST00000186401 827 ntBASIC5.95□□□□□ -1.46
Clp1Q99LI9 Mrgprb1-202ENSMUST00000188095 472 ntTSL 3 BASIC5.95□□□□□ -1.46
Clp1Q99LI9 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Clp1Q99LI9 Gm37661-201ENSMUST00000191863 1550 ntBASIC5.95□□□□□ -1.46
Clp1Q99LI9 Crs-ps-201ENSMUST00000203723 760 ntBASIC5.95□□□□□ -1.46
Clp1Q99LI9 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC5.95□□□□□ -1.46
Clp1Q99LI9 AC117570.1-201ENSMUST00000214015 1886 ntTSL 5 BASIC5.95□□□□□ -1.46
Clp1Q99LI9 AC133076.1-201ENSMUST00000228074 484 ntBASIC5.95□□□□□ -1.46
Clp1Q99LI9 Dnah6-201ENSMUST00000064948 12652 ntAPPRIS P2 TSL 5 BASIC5.95□□□□□ -1.46
Clp1Q99LI9 Gm23511-201ENSMUST00000083084 164 ntBASIC5.95□□□□□ -1.46
Clp1Q99LI9 Mir181a-2-201ENSMUST00000083489 76 ntBASIC5.95□□□□□ -1.46
Clp1Q99LI9 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Clp1Q99LI9 Gm20789-201ENSMUST00000221002 4195 ntBASIC5.95□□□□□ -1.46
Clp1Q99LI9 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC5.95□□□□□ -1.46
Clp1Q99LI9 Grin2b-201ENSMUST00000053880 24060 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Clp1Q99LI9 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC5.95□□□□□ -1.46
Clp1Q99LI9 Ncoa7-208ENSMUST00000215926 2875 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Clp1Q99LI9 Mgam2-ps-201ENSMUST00000195870 3745 ntBASIC5.95□□□□□ -1.46
Clp1Q99LI9 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC5.94□□□□□ -1.46
Clp1Q99LI9 Olfr447-202ENSMUST00000216408 3185 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Clp1Q99LI9 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Clp1Q99LI9 Rnf24-201ENSMUST00000059372 5978 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Clp1Q99LI9 Stk3-205ENSMUST00000226555 2730 ntAPPRIS ALT2 BASIC5.94□□□□□ -1.46
Clp1Q99LI9 Gm13919-202ENSMUST00000140238 1552 ntTSL 5 BASIC5.94□□□□□ -1.46
Clp1Q99LI9 Gm43831-201ENSMUST00000200461 2598 ntBASIC5.94□□□□□ -1.46
Clp1Q99LI9 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Clp1Q99LI9 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Clp1Q99LI9 Btbd35f16-201ENSMUST00000185755 1949 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Clp1Q99LI9 Ncoa7-212ENSMUST00000217644 2256 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Clp1Q99LI9 Snord116l9-201ENSMUST00000101891 94 ntBASIC5.94□□□□□ -1.46
Clp1Q99LI9 Gm26504-201ENSMUST00000102033 94 ntBASIC5.94□□□□□ -1.46
Clp1Q99LI9 Gm15560-201ENSMUST00000117107 643 ntBASIC5.94□□□□□ -1.46
Clp1Q99LI9 Gm11325-201ENSMUST00000119967 469 ntBASIC5.94□□□□□ -1.46
Clp1Q99LI9 Olfr637-ps1-201ENSMUST00000120386 471 ntBASIC5.94□□□□□ -1.46
Clp1Q99LI9 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC5.94□□□□□ -1.46
Clp1Q99LI9 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC5.94□□□□□ -1.46
Clp1Q99LI9 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC5.94□□□□□ -1.46
Clp1Q99LI9 Gm25827-201ENSMUST00000157089 107 ntBASIC5.94□□□□□ -1.46
Clp1Q99LI9 Gm15900-201ENSMUST00000161584 342 ntBASIC5.94□□□□□ -1.46
Clp1Q99LI9 Gm25243-201ENSMUST00000174912 207 ntBASIC5.94□□□□□ -1.46
Clp1Q99LI9 Gm22258-201ENSMUST00000177645 94 ntBASIC5.94□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms