Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Npy2r-202ENSMUST00000098997 3325 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Trim47Q8C0E3 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Trim47Q8C0E3 Qser1-201ENSMUST00000117237 8973 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Trim47Q8C0E3 Gm44679-201ENSMUST00000207202 2908 ntBASIC6.37□□□□□ -1.39
Trim47Q8C0E3 Fus-202ENSMUST00000079045 2623 ntBASIC6.37□□□□□ -1.39
Trim47Q8C0E3 Gm13712-201ENSMUST00000117484 2295 ntBASIC6.37□□□□□ -1.39
Trim47Q8C0E3 Gm26655-203ENSMUST00000181095 2078 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Trim47Q8C0E3 Gm26680-203ENSMUST00000181701 2078 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Trim47Q8C0E3 Gm26630-204ENSMUST00000181759 2078 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Trim47Q8C0E3 Gm26650-204ENSMUST00000181881 2078 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Trim47Q8C0E3 AC174797.3-203ENSMUST00000225749 2078 ntBASIC6.37□□□□□ -1.39
Trim47Q8C0E3 Zp3r-203ENSMUST00000142416 1835 ntTSL 5 BASIC6.37□□□□□ -1.39
Trim47Q8C0E3 Ctsq-201ENSMUST00000021888 1378 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Trim47Q8C0E3 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC6.37□□□□□ -1.39
Trim47Q8C0E3 Gm22499-201ENSMUST00000104501 135 ntBASIC6.37□□□□□ -1.39
Trim47Q8C0E3 Gm12901-201ENSMUST00000118690 532 ntBASIC6.37□□□□□ -1.39
Trim47Q8C0E3 Gm12042-201ENSMUST00000120479 301 ntBASIC6.37□□□□□ -1.39
Trim47Q8C0E3 Gm15044-201ENSMUST00000120703 598 ntBASIC6.37□□□□□ -1.39
Trim47Q8C0E3 Gm12087-201ENSMUST00000121878 258 ntBASIC6.37□□□□□ -1.39
Trim47Q8C0E3 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Trim47Q8C0E3 Gm6081-201ENSMUST00000134472 489 ntBASIC6.37□□□□□ -1.39
Trim47Q8C0E3 Gm16358-201ENSMUST00000146046 210 ntBASIC6.37□□□□□ -1.39
Trim47Q8C0E3 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC6.37□□□□□ -1.39
Trim47Q8C0E3 Gm22219-201ENSMUST00000157562 319 ntBASIC6.37□□□□□ -1.39
Trim47Q8C0E3 Gm17148-201ENSMUST00000164702 249 ntBASIC6.37□□□□□ -1.39
Trim47Q8C0E3 Mir5099-201ENSMUST00000175257 74 ntBASIC6.37□□□□□ -1.39
Trim47Q8C0E3 Gm26180-201ENSMUST00000179942 107 ntBASIC6.37□□□□□ -1.39
Trim47Q8C0E3 Gm4557-201ENSMUST00000185826 907 ntBASIC6.37□□□□□ -1.39
Trim47Q8C0E3 Gm4526-201ENSMUST00000186039 920 ntBASIC6.37□□□□□ -1.39
Trim47Q8C0E3 Gm18802-201ENSMUST00000186270 888 ntBASIC6.37□□□□□ -1.39
Trim47Q8C0E3 Gm8708-201ENSMUST00000188500 906 ntBASIC6.37□□□□□ -1.39
Trim47Q8C0E3 Rhox7-ps2-201ENSMUST00000197804 322 ntBASIC6.37□□□□□ -1.39
Trim47Q8C0E3 Gm44108-201ENSMUST00000203525 422 ntBASIC6.37□□□□□ -1.39
Trim47Q8C0E3 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC6.37□□□□□ -1.39
Trim47Q8C0E3 Gm17989-201ENSMUST00000211543 412 ntBASIC6.37□□□□□ -1.39
Trim47Q8C0E3 Olfr880-ps1-201ENSMUST00000212344 229 ntBASIC6.37□□□□□ -1.39
Trim47Q8C0E3 Gm18252-202ENSMUST00000214886 409 ntTSL 5 BASIC6.37□□□□□ -1.39
Trim47Q8C0E3 AC158606.1-201ENSMUST00000220078 325 ntBASIC6.37□□□□□ -1.39
Trim47Q8C0E3 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC6.37□□□□□ -1.39
Trim47Q8C0E3 AC156802.1-201ENSMUST00000223623 579 ntBASIC6.37□□□□□ -1.39
Trim47Q8C0E3 AC125311.1-201ENSMUST00000226950 220 ntBASIC6.37□□□□□ -1.39
Trim47Q8C0E3 Olfr1342-202ENSMUST00000216226 3269 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
Trim47Q8C0E3 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Trim47Q8C0E3 Mef2c-203ENSMUST00000185052 3556 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Trim47Q8C0E3 Olfr19-202ENSMUST00000206365 1967 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
Trim47Q8C0E3 Psg27-201ENSMUST00000094794 1942 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Trim47Q8C0E3 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Trim47Q8C0E3 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Trim47Q8C0E3 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Trim47Q8C0E3 Platr25-202ENSMUST00000220733 2859 ntAPPRIS P5 TSL 5 BASIC6.36□□□□□ -1.39
Trim47Q8C0E3 Bclaf1-202ENSMUST00000092678 5307 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
Trim47Q8C0E3 Ubqlnl-201ENSMUST00000059121 2298 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Trim47Q8C0E3 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Trim47Q8C0E3 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Trim47Q8C0E3 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Trim47Q8C0E3 Gm37717-201ENSMUST00000192647 3027 ntBASIC6.36□□□□□ -1.39
Trim47Q8C0E3 Trav14-3-201ENSMUST00000103589 384 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Trim47Q8C0E3 Gm14774-201ENSMUST00000117857 536 ntBASIC6.36□□□□□ -1.39
Trim47Q8C0E3 Gm12691-201ENSMUST00000120186 456 ntBASIC6.36□□□□□ -1.39
Trim47Q8C0E3 Gm5405-201ENSMUST00000120478 609 ntBASIC6.36□□□□□ -1.39
Trim47Q8C0E3 Gm11556-201ENSMUST00000120751 288 ntBASIC6.36□□□□□ -1.39
Trim47Q8C0E3 Gm25152-201ENSMUST00000157117 114 ntBASIC6.36□□□□□ -1.39
Trim47Q8C0E3 Gm23224-201ENSMUST00000158122 271 ntBASIC6.36□□□□□ -1.39
Trim47Q8C0E3 Gm25227-201ENSMUST00000158204 112 ntBASIC6.36□□□□□ -1.39
Trim47Q8C0E3 Gm22650-201ENSMUST00000175138 105 ntBASIC6.36□□□□□ -1.39
Trim47Q8C0E3 Mir3572-201ENSMUST00000175549 86 ntBASIC6.36□□□□□ -1.39
Trim47Q8C0E3 Gm4845-201ENSMUST00000179202 562 ntBASIC6.36□□□□□ -1.39
Trim47Q8C0E3 Trav6-4-202ENSMUST00000184650 338 ntAPPRIS ALT2 BASIC6.36□□□□□ -1.39
Trim47Q8C0E3 Gm28238-201ENSMUST00000188102 383 ntTSL 5 BASIC6.36□□□□□ -1.39
Trim47Q8C0E3 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC6.36□□□□□ -1.39
Trim47Q8C0E3 Trav15n-3-201ENSMUST00000200498 168 ntBASIC6.36□□□□□ -1.39
Trim47Q8C0E3 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Trim47Q8C0E3 Gm44820-201ENSMUST00000207420 396 ntBASIC6.36□□□□□ -1.39
Trim47Q8C0E3 Gm31166-201ENSMUST00000209326 288 ntBASIC6.36□□□□□ -1.39
Trim47Q8C0E3 Gm45395-201ENSMUST00000209891 559 ntBASIC6.36□□□□□ -1.39
Trim47Q8C0E3 AC132474.2-201ENSMUST00000217414 573 ntTSL 5 BASIC6.36□□□□□ -1.39
Trim47Q8C0E3 AC153943.1-201ENSMUST00000219312 256 ntBASIC6.36□□□□□ -1.39
Trim47Q8C0E3 AC154733.1-201ENSMUST00000221126 679 ntTSL 5 BASIC6.36□□□□□ -1.39
Trim47Q8C0E3 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Trim47Q8C0E3 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Trim47Q8C0E3 n-R5s215-201ENSMUST00000082480 104 ntBASIC6.36□□□□□ -1.39
Trim47Q8C0E3 Snora23-201ENSMUST00000082517 184 ntBASIC6.36□□□□□ -1.39
Trim47Q8C0E3 Gm24410-201ENSMUST00000083433 107 ntBASIC6.36□□□□□ -1.39
Trim47Q8C0E3 Kcnmb2-202ENSMUST00000119970 2919 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Trim47Q8C0E3 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Trim47Q8C0E3 Gm42923-201ENSMUST00000198438 2896 ntBASIC6.36□□□□□ -1.39
Trim47Q8C0E3 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Trim47Q8C0E3 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Trim47Q8C0E3 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Trim47Q8C0E3 AL670757.1-201ENSMUST00000223668 1959 ntBASIC6.36□□□□□ -1.39
Trim47Q8C0E3 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Trim47Q8C0E3 AC117570.1-201ENSMUST00000214015 1886 ntTSL 5 BASIC6.36□□□□□ -1.39
Trim47Q8C0E3 CT009696.4-201ENSMUST00000213487 1801 ntTSL 5 BASIC6.36□□□□□ -1.39
Trim47Q8C0E3 AC160028.2-201ENSMUST00000218937 2519 ntBASIC6.36□□□□□ -1.39
Trim47Q8C0E3 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
Trim47Q8C0E3 Gm38412-201ENSMUST00000199205 3895 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Trim47Q8C0E3 Gm20345-201ENSMUST00000175839 2414 ntBASIC6.36□□□□□ -1.39
Trim47Q8C0E3 Cyp3a16-201ENSMUST00000031633 1730 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Trim47Q8C0E3 Asb15-202ENSMUST00000117688 4371 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Trim47Q8C0E3 4921515E04Rik-203ENSMUST00000227364 2309 ntBASIC6.36□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 122 ms