Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
Ush2AQ2QI47 Klhl13-205ENSMUST00000115319 3349 ntAPPRIS P2 TSL 1 (best) BASIC1.9□□□□□ -2.1
Ush2AQ2QI47 Ankrd12-201ENSMUST00000038116 8991 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
Ush2AQ2QI47 Gm14810-201ENSMUST00000121628 486 ntBASIC1.9□□□□□ -2.1
Ush2AQ2QI47 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC1.9□□□□□ -2.1
Ush2AQ2QI47 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC1.9□□□□□ -2.1
Ush2AQ2QI47 AC161520.1-201ENSMUST00000210954 939 ntBASIC1.9□□□□□ -2.1
Ush2AQ2QI47 AC106830.1-201ENSMUST00000228032 1003 ntBASIC1.9□□□□□ -2.1
Ush2AQ2QI47 Olfr566-203ENSMUST00000213481 2040 ntAPPRIS ALT1 TSL 3 BASIC1.9□□□□□ -2.1
Ush2AQ2QI47 B230334C09Rik-201ENSMUST00000200255 8927 ntBASIC1.9□□□□□ -2.11
Ush2AQ2QI47 AC134596.1-201ENSMUST00000222016 1922 ntBASIC1.9□□□□□ -2.11
Ush2AQ2QI47 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
Ush2AQ2QI47 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
Ush2AQ2QI47 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
Ush2AQ2QI47 Gm20342-201ENSMUST00000185480 9720 ntBASIC1.9□□□□□ -2.11
Ush2AQ2QI47 Vmn1r218-202ENSMUST00000226692 10430 ntAPPRIS P2 BASIC1.9□□□□□ -2.11
Ush2AQ2QI47 Gm11281-201ENSMUST00000141391 576 ntBASIC1.9□□□□□ -2.11
Ush2AQ2QI47 Gm24436-201ENSMUST00000157889 302 ntBASIC1.9□□□□□ -2.11
Ush2AQ2QI47 Gm17155-201ENSMUST00000165969 473 ntBASIC1.9□□□□□ -2.11
Ush2AQ2QI47 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
Ush2AQ2QI47 AC134333.1-201ENSMUST00000204536 944 ntBASIC1.9□□□□□ -2.11
Ush2AQ2QI47 Olfr1244-ps1-201ENSMUST00000213226 683 ntBASIC1.9□□□□□ -2.11
Ush2AQ2QI47 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC1.9□□□□□ -2.11
Ush2AQ2QI47 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
Ush2AQ2QI47 Gm43826-201ENSMUST00000199604 2612 ntBASIC1.9□□□□□ -2.11
Ush2AQ2QI47 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
Ush2AQ2QI47 Esrrg-202ENSMUST00000110938 5373 ntAPPRIS ALT1 TSL 1 (best) BASIC1.9□□□□□ -2.11
Ush2AQ2QI47 Adam22-202ENSMUST00000050166 8969 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
Ush2AQ2QI47 Gm7470-201ENSMUST00000194219 2095 ntBASIC1.9□□□□□ -2.11
Ush2AQ2QI47 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
Ush2AQ2QI47 Gm44078-201ENSMUST00000204652 2646 ntBASIC1.9□□□□□ -2.11
Ush2AQ2QI47 Gm26247-201ENSMUST00000116702 91 ntBASIC1.9□□□□□ -2.11
Ush2AQ2QI47 Klra8-201ENSMUST00000014476 1178 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
Ush2AQ2QI47 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC1.9□□□□□ -2.11
Ush2AQ2QI47 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC1.9□□□□□ -2.11
Ush2AQ2QI47 AC157572.3-201ENSMUST00000227288 303 ntBASIC1.9□□□□□ -2.11
Ush2AQ2QI47 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
Ush2AQ2QI47 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC1.9□□□□□ -2.11
Ush2AQ2QI47 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC1.9□□□□□ -2.11
Ush2AQ2QI47 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
Ush2AQ2QI47 Gm26753-201ENSMUST00000181938 2731 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
Ush2AQ2QI47 Plce1-201ENSMUST00000169713 9439 ntAPPRIS P2 TSL 1 (best) BASIC1.9□□□□□ -2.11
Ush2AQ2QI47 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
Ush2AQ2QI47 Plch1-202ENSMUST00000059973 6241 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
Ush2AQ2QI47 Spam1-203ENSMUST00000202569 2107 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
Ush2AQ2QI47 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Ush2AQ2QI47 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Ush2AQ2QI47 Gm26396-201ENSMUST00000104093 132 ntBASIC1.89□□□□□ -2.11
Ush2AQ2QI47 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC1.89□□□□□ -2.11
Ush2AQ2QI47 Gm44543-201ENSMUST00000209136 396 ntBASIC1.89□□□□□ -2.11
Ush2AQ2QI47 Dcx-201ENSMUST00000033642 9074 ntAPPRIS ALT1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Ush2AQ2QI47 Scn1a-202ENSMUST00000094951 5946 ntTSL 5 BASIC1.89□□□□□ -2.11
Ush2AQ2QI47 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
Ush2AQ2QI47 Zfp352-201ENSMUST00000080541 1656 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Ush2AQ2QI47 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Ush2AQ2QI47 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
Ush2AQ2QI47 Spam1-202ENSMUST00000202331 2100 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Ush2AQ2QI47 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
Ush2AQ2QI47 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC1.89□□□□□ -2.11
Ush2AQ2QI47 Olfr1295-202ENSMUST00000207786 1043 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Ush2AQ2QI47 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Ush2AQ2QI47 Olfr968-201ENSMUST00000075928 1027 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Ush2AQ2QI47 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Ush2AQ2QI47 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
Ush2AQ2QI47 Gm42888-201ENSMUST00000202425 4361 ntBASIC1.89□□□□□ -2.11
Ush2AQ2QI47 Dnah17-204ENSMUST00000132685 13612 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
Ush2AQ2QI47 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Ush2AQ2QI47 Gabpb2-205ENSMUST00000136139 8661 ntAPPRIS P2 TSL 1 (best) BASIC1.89□□□□□ -2.11
Ush2AQ2QI47 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC1.89□□□□□ -2.11
Ush2AQ2QI47 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
Ush2AQ2QI47 Gm24885-201ENSMUST00000158783 270 ntBASIC1.89□□□□□ -2.11
Ush2AQ2QI47 AC167669.1-201ENSMUST00000224932 384 ntBASIC1.89□□□□□ -2.11
Ush2AQ2QI47 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Ush2AQ2QI47 Arhgef38-202ENSMUST00000147041 6541 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Ush2AQ2QI47 Pcdh11x-202ENSMUST00000113358 8607 ntAPPRIS P2 TSL 5 BASIC1.89□□□□□ -2.11
Ush2AQ2QI47 Olfr1428-202ENSMUST00000208391 1368 ntTSL 3 BASIC1.89□□□□□ -2.11
Ush2AQ2QI47 Frmpd4-202ENSMUST00000112146 8153 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
Ush2AQ2QI47 Akr1c14-201ENSMUST00000041768 2436 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Ush2AQ2QI47 Serpini1-201ENSMUST00000029423 4091 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Ush2AQ2QI47 Zfyve26-201ENSMUST00000021547 9391 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Ush2AQ2QI47 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
Ush2AQ2QI47 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC1.89□□□□□ -2.11
Ush2AQ2QI47 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Ush2AQ2QI47 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC1.89□□□□□ -2.11
Ush2AQ2QI47 Gm22722-201ENSMUST00000157467 132 ntBASIC1.89□□□□□ -2.11
Ush2AQ2QI47 Gm22833-201ENSMUST00000158292 132 ntBASIC1.89□□□□□ -2.11
Ush2AQ2QI47 Fth-ps2-201ENSMUST00000168364 516 ntBASIC1.89□□□□□ -2.11
Ush2AQ2QI47 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC1.89□□□□□ -2.11
Ush2AQ2QI47 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
Ush2AQ2QI47 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
Ush2AQ2QI47 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC1.89□□□□□ -2.11
Ush2AQ2QI47 Ptprd-203ENSMUST00000098005 4542 ntTSL 5 BASIC1.89□□□□□ -2.11
Ush2AQ2QI47 Alms1-205ENSMUST00000213058 11163 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
Ush2AQ2QI47 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Ush2AQ2QI47 Olfr1219-204ENSMUST00000215225 5865 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Ush2AQ2QI47 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Ush2AQ2QI47 Slc7a2-201ENSMUST00000057784 7910 ntAPPRIS P3 TSL 1 (best) BASIC1.89□□□□□ -2.11
Ush2AQ2QI47 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Ush2AQ2QI47 Nvl-201ENSMUST00000027797 9392 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Ush2AQ2QI47 Gm37151-201ENSMUST00000194631 5007 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms