Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm26468-201ENSMUST00000158644 106 ntBASIC6.76□□□□□ -1.33
Col17a1Q07563 Gm17377-201ENSMUST00000165184 207 ntBASIC6.76□□□□□ -1.33
Col17a1Q07563 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC6.76□□□□□ -1.33
Col17a1Q07563 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC6.76□□□□□ -1.33
Col17a1Q07563 Olfr845-202ENSMUST00000213344 3530 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Col17a1Q07563 Gm5649-201ENSMUST00000217918 951 ntBASIC6.76□□□□□ -1.33
Col17a1Q07563 AC168059.1-201ENSMUST00000225846 841 ntBASIC6.76□□□□□ -1.33
Col17a1Q07563 5430401F13Rik-201ENSMUST00000075020 602 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Col17a1Q07563 Ceacam1-201ENSMUST00000098666 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Col17a1Q07563 Gm42801-201ENSMUST00000202562 2865 ntBASIC6.76□□□□□ -1.33
Col17a1Q07563 AC144772.3-201ENSMUST00000228829 3126 ntBASIC6.76□□□□□ -1.33
Col17a1Q07563 Pramel6-201ENSMUST00000026956 1540 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Col17a1Q07563 Gm2123-201ENSMUST00000221476 2836 ntBASIC6.76□□□□□ -1.33
Col17a1Q07563 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Col17a1Q07563 Gm6300-201ENSMUST00000192393 1498 ntBASIC6.75□□□□□ -1.33
Col17a1Q07563 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
Col17a1Q07563 Gm43009-201ENSMUST00000199979 3566 ntBASIC6.75□□□□□ -1.33
Col17a1Q07563 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Col17a1Q07563 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col17a1Q07563 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC6.75□□□□□ -1.33
Col17a1Q07563 Gm25595-201ENSMUST00000102273 97 ntBASIC6.75□□□□□ -1.33
Col17a1Q07563 Gm14677-201ENSMUST00000117866 486 ntBASIC6.75□□□□□ -1.33
Col17a1Q07563 Gm15981-201ENSMUST00000119196 457 ntBASIC6.75□□□□□ -1.33
Col17a1Q07563 Olfr1298-201ENSMUST00000119566 939 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Col17a1Q07563 Gm15034-201ENSMUST00000120043 349 ntBASIC6.75□□□□□ -1.33
Col17a1Q07563 Gm23540-201ENSMUST00000157543 164 ntBASIC6.75□□□□□ -1.33
Col17a1Q07563 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC6.75□□□□□ -1.33
Col17a1Q07563 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col17a1Q07563 BE692007-201ENSMUST00000186054 954 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Col17a1Q07563 Gm38261-201ENSMUST00000192608 316 ntBASIC6.75□□□□□ -1.33
Col17a1Q07563 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC6.75□□□□□ -1.33
Col17a1Q07563 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Col17a1Q07563 AC159297.1-201ENSMUST00000218689 290 ntBASIC6.75□□□□□ -1.33
Col17a1Q07563 AC154692.1-201ENSMUST00000228314 544 ntBASIC6.75□□□□□ -1.33
Col17a1Q07563 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col17a1Q07563 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col17a1Q07563 Olfr813-201ENSMUST00000064893 933 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Col17a1Q07563 Olfr134-201ENSMUST00000074883 939 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Col17a1Q07563 Olfr1220-201ENSMUST00000099789 1026 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Col17a1Q07563 Olfr1220-202ENSMUST00000099806 1201 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
Col17a1Q07563 Gm37140-201ENSMUST00000192914 1684 ntBASIC6.75□□□□□ -1.33
Col17a1Q07563 Gm28240-201ENSMUST00000187560 2053 ntBASIC6.75□□□□□ -1.33
Col17a1Q07563 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Col17a1Q07563 Gm6645-201ENSMUST00000118505 2726 ntBASIC6.75□□□□□ -1.33
Col17a1Q07563 Klhl13-204ENSMUST00000115317 3216 ntAPPRIS ALT1 TSL 5 BASIC6.75□□□□□ -1.33
Col17a1Q07563 Gm42536-201ENSMUST00000197562 1613 ntBASIC6.75□□□□□ -1.33
Col17a1Q07563 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Col17a1Q07563 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col17a1Q07563 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Col17a1Q07563 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC6.75□□□□□ -1.33
Col17a1Q07563 Olfr536-201ENSMUST00000064392 3853 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col17a1Q07563 3222401L13Rik-202ENSMUST00000192137 6292 ntBASIC6.74□□□□□ -1.33
Col17a1Q07563 Gm12125-201ENSMUST00000117261 736 ntBASIC6.74□□□□□ -1.33
Col17a1Q07563 Gm8569-201ENSMUST00000117630 647 ntBASIC6.74□□□□□ -1.33
Col17a1Q07563 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
Col17a1Q07563 Gm15381-201ENSMUST00000121501 1156 ntBASIC6.74□□□□□ -1.33
Col17a1Q07563 4930503B20Rik-203ENSMUST00000149825 970 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col17a1Q07563 Gm23318-201ENSMUST00000158000 108 ntBASIC6.74□□□□□ -1.33
Col17a1Q07563 Gm23385-201ENSMUST00000158592 295 ntBASIC6.74□□□□□ -1.33
Col17a1Q07563 Gm19203-201ENSMUST00000174049 939 ntBASIC6.74□□□□□ -1.33
Col17a1Q07563 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC6.74□□□□□ -1.33
Col17a1Q07563 Gm38329-201ENSMUST00000193473 427 ntBASIC6.74□□□□□ -1.33
Col17a1Q07563 Gm43004-201ENSMUST00000201872 703 ntBASIC6.74□□□□□ -1.33
Col17a1Q07563 Minpp1-ps-201ENSMUST00000203344 946 ntBASIC6.74□□□□□ -1.33
Col17a1Q07563 Olfr437-202ENSMUST00000205175 2952 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Col17a1Q07563 Gm32536-201ENSMUST00000205209 445 ntBASIC6.74□□□□□ -1.33
Col17a1Q07563 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC6.74□□□□□ -1.33
Col17a1Q07563 Olfr1488-ps1-201ENSMUST00000207436 136 ntBASIC6.74□□□□□ -1.33
Col17a1Q07563 Olfr1486-ps1-201ENSMUST00000208835 220 ntBASIC6.74□□□□□ -1.33
Col17a1Q07563 5430402P08Rik-201ENSMUST00000211799 1143 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Col17a1Q07563 AC158536.1-201ENSMUST00000222510 256 ntBASIC6.74□□□□□ -1.33
Col17a1Q07563 AC131085.1-201ENSMUST00000224746 656 ntBASIC6.74□□□□□ -1.33
Col17a1Q07563 AC192333.2-201ENSMUST00000224771 196 ntBASIC6.74□□□□□ -1.33
Col17a1Q07563 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Col17a1Q07563 Sprr1b-201ENSMUST00000062160 830 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col17a1Q07563 Gm23518-201ENSMUST00000082835 153 ntBASIC6.74□□□□□ -1.33
Col17a1Q07563 Dlx6os1-201ENSMUST00000159568 4608 ntTSL 5 BASIC6.74□□□□□ -1.33
Col17a1Q07563 B230206I08Rik-201ENSMUST00000207479 3191 ntBASIC6.74□□□□□ -1.33
Col17a1Q07563 Gm17308-201ENSMUST00000181749 1997 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Col17a1Q07563 Ascc3-206ENSMUST00000219226 1357 ntTSL 5 BASIC6.74□□□□□ -1.33
Col17a1Q07563 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
Col17a1Q07563 Pirb-201ENSMUST00000078451 3824 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col17a1Q07563 Platr21-201ENSMUST00000126339 3511 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Col17a1Q07563 AC159326.1-201ENSMUST00000219989 1302 ntBASIC6.74□□□□□ -1.33
Col17a1Q07563 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Col17a1Q07563 AC158938.1-201ENSMUST00000225372 6720 ntBASIC6.74□□□□□ -1.33
Col17a1Q07563 AC154386.1-201ENSMUST00000222753 2871 ntBASIC6.74□□□□□ -1.33
Col17a1Q07563 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
Col17a1Q07563 Olfr1290-204ENSMUST00000217611 2729 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
Col17a1Q07563 Gm15010-201ENSMUST00000117153 407 ntBASIC6.73□□□□□ -1.33
Col17a1Q07563 Gm14605-201ENSMUST00000120599 268 ntBASIC6.73□□□□□ -1.33
Col17a1Q07563 Gm14982-201ENSMUST00000121102 442 ntBASIC6.73□□□□□ -1.33
Col17a1Q07563 Gm14473-201ENSMUST00000122269 557 ntBASIC6.73□□□□□ -1.33
Col17a1Q07563 Gm15522-201ENSMUST00000134467 785 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Col17a1Q07563 Vmn2r-ps86-201ENSMUST00000174812 871 ntBASIC6.73□□□□□ -1.33
Col17a1Q07563 Gm23215-201ENSMUST00000178153 121 ntBASIC6.73□□□□□ -1.33
Col17a1Q07563 Gm19124-201ENSMUST00000191041 832 ntBASIC6.73□□□□□ -1.33
Col17a1Q07563 Gm18747-201ENSMUST00000198129 648 ntBASIC6.73□□□□□ -1.33
Col17a1Q07563 AC132384.13-201ENSMUST00000219556 1159 ntBASIC6.73□□□□□ -1.33
Col17a1Q07563 AC154239.2-201ENSMUST00000227859 233 ntBASIC6.73□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms