Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm18441-201ENSMUST00000223539 617 ntBASIC2.49□□□□□ -2.01
PrkdcP97313 Peli1-202ENSMUST00000101477 3703 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
PrkdcP97313 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC2.49□□□□□ -2.01
PrkdcP97313 Gm8641-201ENSMUST00000186995 826 ntBASIC2.49□□□□□ -2.01
PrkdcP97313 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC2.49□□□□□ -2.01
PrkdcP97313 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
PrkdcP97313 Gm44972-201ENSMUST00000206419 406 ntBASIC2.49□□□□□ -2.01
PrkdcP97313 1700105G05Rik-201ENSMUST00000222238 411 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
PrkdcP97313 CT030662.2-201ENSMUST00000226942 805 ntBASIC2.49□□□□□ -2.01
PrkdcP97313 Olfr847-201ENSMUST00000079620 939 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
PrkdcP97313 Fbxw23-202ENSMUST00000198480 1388 ntBASIC2.48□□□□□ -2.01
PrkdcP97313 Gm42479-201ENSMUST00000198654 1356 ntBASIC2.48□□□□□ -2.01
PrkdcP97313 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC2.48□□□□□ -2.01
PrkdcP97313 AC113059.2-201ENSMUST00000213462 3016 ntBASIC2.48□□□□□ -2.01
PrkdcP97313 Olfr1196-202ENSMUST00000216928 4270 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
PrkdcP97313 Olfr552-202ENSMUST00000215712 4206 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
PrkdcP97313 Prrc2c-202ENSMUST00000182149 11289 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
PrkdcP97313 Gm5141-201ENSMUST00000167516 1743 ntTSL 5 BASIC2.48□□□□□ -2.01
PrkdcP97313 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
PrkdcP97313 Gm4064-201ENSMUST00000187482 1561 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
PrkdcP97313 Gm28074-201ENSMUST00000190424 1497 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
PrkdcP97313 Gm20177-201ENSMUST00000203705 334 ntBASIC2.48□□□□□ -2.01
PrkdcP97313 Gm44371-201ENSMUST00000204148 467 ntBASIC2.48□□□□□ -2.01
PrkdcP97313 AC159252.1-201ENSMUST00000224450 553 ntBASIC2.48□□□□□ -2.01
PrkdcP97313 Ush2a-201ENSMUST00000060479 15695 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
PrkdcP97313 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
PrkdcP97313 Gm1527-201ENSMUST00000099170 2120 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
PrkdcP97313 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC2.48□□□□□ -2.01
PrkdcP97313 Helz-203ENSMUST00000106746 13147 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
PrkdcP97313 Gp6-202ENSMUST00000206928 5900 ntAPPRIS P2 TSL 1 (best) BASIC2.48□□□□□ -2.01
PrkdcP97313 Nufip2-201ENSMUST00000100802 5158 ntAPPRIS P2 TSL 1 (best) BASIC2.48□□□□□ -2.01
PrkdcP97313 Sh3d19-203ENSMUST00000182666 6886 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
PrkdcP97313 Gm37964-201ENSMUST00000192459 4905 ntBASIC2.48□□□□□ -2.01
PrkdcP97313 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
PrkdcP97313 Gm13599-201ENSMUST00000134476 678 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
PrkdcP97313 Olfr367-ps-202ENSMUST00000143957 942 ntBASIC2.48□□□□□ -2.01
PrkdcP97313 AC174776.1-201ENSMUST00000221509 405 ntBASIC2.48□□□□□ -2.01
PrkdcP97313 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC2.48□□□□□ -2.01
PrkdcP97313 AC174776.2-201ENSMUST00000222561 405 ntBASIC2.48□□□□□ -2.01
PrkdcP97313 Huwe1-201ENSMUST00000026292 14579 ntAPPRIS P2 TSL 1 (best) BASIC2.48□□□□□ -2.01
PrkdcP97313 Gm38403-201ENSMUST00000219032 2357 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
PrkdcP97313 Rtl9-201ENSMUST00000165829 4104 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
PrkdcP97313 Fam196b-202ENSMUST00000165963 5371 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
PrkdcP97313 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
PrkdcP97313 Gm14162-201ENSMUST00000121985 601 ntBASIC2.48□□□□□ -2.01
PrkdcP97313 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
PrkdcP97313 Gm26215-201ENSMUST00000158584 139 ntBASIC2.48□□□□□ -2.01
PrkdcP97313 Gm17117-201ENSMUST00000163665 299 ntBASIC2.48□□□□□ -2.01
PrkdcP97313 Gm27538-201ENSMUST00000185065 294 ntBASIC2.48□□□□□ -2.01
PrkdcP97313 CT030704.1-201ENSMUST00000227521 699 ntBASIC2.48□□□□□ -2.01
PrkdcP97313 n-R5s86-201ENSMUST00000083215 119 ntBASIC2.48□□□□□ -2.01
PrkdcP97313 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC2.48□□□□□ -2.01
PrkdcP97313 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
PrkdcP97313 Asxl3-201ENSMUST00000097655 11697 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
PrkdcP97313 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
PrkdcP97313 Gm11321-201ENSMUST00000121257 902 ntBASIC2.47□□□□□ -2.01
PrkdcP97313 Gm22099-201ENSMUST00000157925 123 ntBASIC2.47□□□□□ -2.01
PrkdcP97313 Gm2343-201ENSMUST00000161177 1042 ntBASIC2.47□□□□□ -2.01
PrkdcP97313 Gm27374-201ENSMUST00000183660 81 ntBASIC2.47□□□□□ -2.01
PrkdcP97313 Gm28997-201ENSMUST00000188759 429 ntBASIC2.47□□□□□ -2.01
PrkdcP97313 Gm42428-201ENSMUST00000198677 302 ntBASIC2.47□□□□□ -2.01
PrkdcP97313 AC153954.2-201ENSMUST00000213811 287 ntBASIC2.47□□□□□ -2.01
PrkdcP97313 Gm8681-201ENSMUST00000219115 618 ntBASIC2.47□□□□□ -2.01
PrkdcP97313 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC2.47□□□□□ -2.01
PrkdcP97313 Gm22043-201ENSMUST00000082993 158 ntBASIC2.47□□□□□ -2.01
PrkdcP97313 Gm37674-201ENSMUST00000194177 1834 ntBASIC2.47□□□□□ -2.01
PrkdcP97313 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
PrkdcP97313 Zan-204ENSMUST00000164178 16451 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
PrkdcP97313 Gm44842-201ENSMUST00000209173 3372 ntBASIC2.47□□□□□ -2.01
PrkdcP97313 Olfr50-202ENSMUST00000216753 4531 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
PrkdcP97313 Acer3-201ENSMUST00000033020 11340 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
PrkdcP97313 Ckap5-203ENSMUST00000111337 6384 ntTSL 5 BASIC2.47□□□□□ -2.01
PrkdcP97313 Gm43191-201ENSMUST00000140672 704 ntAPPRIS P1 TSL 3 BASIC2.47□□□□□ -2.01
PrkdcP97313 Gm24550-201ENSMUST00000158648 279 ntBASIC2.47□□□□□ -2.01
PrkdcP97313 Gm19124-201ENSMUST00000191041 832 ntBASIC2.47□□□□□ -2.01
PrkdcP97313 Gm18384-201ENSMUST00000195974 808 ntBASIC2.47□□□□□ -2.01
PrkdcP97313 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
PrkdcP97313 Gm6261-201ENSMUST00000204707 760 ntBASIC2.47□□□□□ -2.01
PrkdcP97313 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC2.47□□□□□ -2.01
PrkdcP97313 AC124537.1-201ENSMUST00000222890 159 ntBASIC2.47□□□□□ -2.01
PrkdcP97313 Fsd1l-203ENSMUST00000132151 7467 ntAPPRIS P2 TSL 5 BASIC2.47□□□□□ -2.01
PrkdcP97313 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
PrkdcP97313 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
PrkdcP97313 Gm26341-201ENSMUST00000104561 134 ntBASIC2.47□□□□□ -2.01
PrkdcP97313 Acbd7-201ENSMUST00000115089 531 ntAPPRIS P2 TSL 1 (best) BASIC2.47□□□□□ -2.01
PrkdcP97313 Gm11970-201ENSMUST00000116105 320 ntBASIC2.47□□□□□ -2.01
PrkdcP97313 Gm22958-201ENSMUST00000122512 184 ntBASIC2.47□□□□□ -2.01
PrkdcP97313 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
PrkdcP97313 Gm22722-201ENSMUST00000157467 132 ntBASIC2.47□□□□□ -2.01
PrkdcP97313 Gm22833-201ENSMUST00000158292 132 ntBASIC2.47□□□□□ -2.01
PrkdcP97313 Gm23028-201ENSMUST00000158773 265 ntBASIC2.47□□□□□ -2.01
PrkdcP97313 Gm38075-201ENSMUST00000191979 920 ntBASIC2.47□□□□□ -2.01
PrkdcP97313 AC153564.2-201ENSMUST00000219464 273 ntBASIC2.47□□□□□ -2.01
PrkdcP97313 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
PrkdcP97313 AC091783.4-201ENSMUST00000224940 611 ntBASIC2.47□□□□□ -2.01
PrkdcP97313 Olfr477-201ENSMUST00000091605 933 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
PrkdcP97313 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
PrkdcP97313 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC2.47□□□□□ -2.01
PrkdcP97313 Vmn1r196-202ENSMUST00000226245 5312 ntAPPRIS ALT2 BASIC2.47□□□□□ -2.01
PrkdcP97313 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms