Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Sox1P53783 Gm22220-201ENSMUST00000082671 149 ntBASIC5.69□□□□□ -1.5
Sox1P53783 Gm23796-201ENSMUST00000084011 160 ntBASIC5.69□□□□□ -1.5
Sox1P53783 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Sox1P53783 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Sox1P53783 Mrgprb2-201ENSMUST00000052730 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Sox1P53783 Zfp605-201ENSMUST00000086686 2085 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
Sox1P53783 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC5.69□□□□□ -1.5
Sox1P53783 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Sox1P53783 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
Sox1P53783 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Sox1P53783 Tnfsf4-201ENSMUST00000028024 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Sox1P53783 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Sox1P53783 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Sox1P53783 Pign-206ENSMUST00000187537 4006 ntTSL 5 BASIC5.69□□□□□ -1.5
Sox1P53783 Pramel6-201ENSMUST00000026956 1540 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Sox1P53783 AC120375.2-201ENSMUST00000226532 1853 ntBASIC5.68□□□□□ -1.5
Sox1P53783 Gm38377-201ENSMUST00000193253 3772 ntBASIC5.68□□□□□ -1.5
Sox1P53783 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
Sox1P53783 Gm14895-201ENSMUST00000121858 1361 ntBASIC5.68□□□□□ -1.5
Sox1P53783 Gm42894-201ENSMUST00000200788 3390 ntBASIC5.68□□□□□ -1.5
Sox1P53783 Gm4922-201ENSMUST00000055107 1950 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
Sox1P53783 Gm20300-201ENSMUST00000214634 3440 ntBASIC5.68□□□□□ -1.5
Sox1P53783 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sox1P53783 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Sox1P53783 Izumo3-201ENSMUST00000107108 1252 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sox1P53783 Gm12427-201ENSMUST00000117719 302 ntBASIC5.68□□□□□ -1.5
Sox1P53783 Gm15297-201ENSMUST00000117795 290 ntBASIC5.68□□□□□ -1.5
Sox1P53783 Gm11409-201ENSMUST00000118621 403 ntBASIC5.68□□□□□ -1.5
Sox1P53783 Gm12053-201ENSMUST00000119022 252 ntBASIC5.68□□□□□ -1.5
Sox1P53783 Gm5060-201ENSMUST00000120072 599 ntBASIC5.68□□□□□ -1.5
Sox1P53783 Gm15905-201ENSMUST00000137042 298 ntBASIC5.68□□□□□ -1.5
Sox1P53783 Gm13348-201ENSMUST00000147324 690 ntTSL 5 BASIC5.68□□□□□ -1.5
Sox1P53783 Gm23124-201ENSMUST00000157650 107 ntBASIC5.68□□□□□ -1.5
Sox1P53783 Scarna13-201ENSMUST00000158164 275 ntBASIC5.68□□□□□ -1.5
Sox1P53783 Gm25902-201ENSMUST00000158493 318 ntBASIC5.68□□□□□ -1.5
Sox1P53783 Gm9294-201ENSMUST00000165198 789 ntBASIC5.68□□□□□ -1.5
Sox1P53783 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Sox1P53783 Gm26426-201ENSMUST00000177866 123 ntBASIC5.68□□□□□ -1.5
Sox1P53783 Gm23141-201ENSMUST00000178682 94 ntBASIC5.68□□□□□ -1.5
Sox1P53783 Gm26060-201ENSMUST00000180094 123 ntBASIC5.68□□□□□ -1.5
Sox1P53783 Mir7222-201ENSMUST00000183740 75 ntBASIC5.68□□□□□ -1.5
Sox1P53783 Gm27190-201ENSMUST00000184890 542 ntBASIC5.68□□□□□ -1.5
Sox1P53783 Gm3145-201ENSMUST00000188584 220 ntBASIC5.68□□□□□ -1.5
Sox1P53783 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Sox1P53783 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC5.68□□□□□ -1.5
Sox1P53783 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Sox1P53783 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC5.68□□□□□ -1.5
Sox1P53783 Gm45722-201ENSMUST00000213075 466 ntBASIC5.68□□□□□ -1.5
Sox1P53783 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC5.68□□□□□ -1.5
Sox1P53783 Gm18628-201ENSMUST00000220584 475 ntBASIC5.68□□□□□ -1.5
Sox1P53783 AC122924.2-201ENSMUST00000220799 298 ntBASIC5.68□□□□□ -1.5
Sox1P53783 AC211878.1-201ENSMUST00000221668 474 ntBASIC5.68□□□□□ -1.5
Sox1P53783 AC168881.1-201ENSMUST00000226018 430 ntBASIC5.68□□□□□ -1.5
Sox1P53783 AC139294.1-201ENSMUST00000226708 571 ntBASIC5.68□□□□□ -1.5
Sox1P53783 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Sox1P53783 Gm23515-201ENSMUST00000082829 107 ntBASIC5.68□□□□□ -1.5
Sox1P53783 Gm21122-201ENSMUST00000191548 3452 ntBASIC5.68□□□□□ -1.5
Sox1P53783 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Sox1P53783 Mmp1a-201ENSMUST00000034492 2022 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Sox1P53783 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sox1P53783 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Sox1P53783 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sox1P53783 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Sox1P53783 AF366264-201ENSMUST00000071308 3157 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Sox1P53783 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sox1P53783 C230038L03Rik-201ENSMUST00000129409 2632 ntTSL 2 BASIC5.68□□□□□ -1.5
Sox1P53783 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sox1P53783 Gm6902-201ENSMUST00000179072 1335 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sox1P53783 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Sox1P53783 AC155243.1-201ENSMUST00000220141 2262 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Sox1P53783 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC5.68□□□□□ -1.5
Sox1P53783 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sox1P53783 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Sox1P53783 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Sox1P53783 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Sox1P53783 Gm3183-202ENSMUST00000201703 2048 ntAPPRIS P5 TSL 1 (best) BASIC5.67□□□□□ -1.5
Sox1P53783 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Sox1P53783 Dnah1-201ENSMUST00000048603 12872 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Sox1P53783 Gm22834-201ENSMUST00000102021 79 ntBASIC5.67□□□□□ -1.5
Sox1P53783 Gm14304-201ENSMUST00000117272 446 ntBASIC5.67□□□□□ -1.5
Sox1P53783 Gm14628-201ENSMUST00000117508 635 ntBASIC5.67□□□□□ -1.5
Sox1P53783 Gm13082-201ENSMUST00000118877 561 ntBASIC5.67□□□□□ -1.5
Sox1P53783 Gm15364-201ENSMUST00000119618 585 ntBASIC5.67□□□□□ -1.5
Sox1P53783 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Sox1P53783 Gm25982-201ENSMUST00000157920 101 ntBASIC5.67□□□□□ -1.5
Sox1P53783 Gm26486-201ENSMUST00000158021 110 ntBASIC5.67□□□□□ -1.5
Sox1P53783 Gm23579-201ENSMUST00000158528 103 ntBASIC5.67□□□□□ -1.5
Sox1P53783 Mir6391-201ENSMUST00000184391 104 ntBASIC5.67□□□□□ -1.5
Sox1P53783 Gm29650-201ENSMUST00000188485 742 ntBASIC5.67□□□□□ -1.5
Sox1P53783 Gm29229-201ENSMUST00000188874 323 ntBASIC5.67□□□□□ -1.5
Sox1P53783 Gm7858-201ENSMUST00000190177 622 ntBASIC5.67□□□□□ -1.5
Sox1P53783 Gm44068-201ENSMUST00000204049 2128 ntBASIC5.67□□□□□ -1.5
Sox1P53783 Gm45232-201ENSMUST00000207811 162 ntBASIC5.67□□□□□ -1.5
Sox1P53783 Olfr491-203ENSMUST00000214605 2136 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
Sox1P53783 AC157515.1-201ENSMUST00000220953 450 ntBASIC5.67□□□□□ -1.5
Sox1P53783 AC115289.1-201ENSMUST00000224915 522 ntBASIC5.67□□□□□ -1.5
Sox1P53783 AC134420.1-201ENSMUST00000227027 289 ntBASIC5.67□□□□□ -1.5
Sox1P53783 Il18-201ENSMUST00000059081 702 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Sox1P53783 5430402E10Rik-201ENSMUST00000063127 798 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms