Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 4930510E17Rik-201ENSMUST00000034550 1639 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Hcn1O88704 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Hcn1O88704 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Hcn1O88704 Gm3665-201ENSMUST00000177214 2461 ntBASIC4.13□□□□□ -1.75
Hcn1O88704 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC4.13□□□□□ -1.75
Hcn1O88704 Gm23431-201ENSMUST00000104006 107 ntBASIC4.13□□□□□ -1.75
Hcn1O88704 Gm4596-201ENSMUST00000117197 442 ntBASIC4.13□□□□□ -1.75
Hcn1O88704 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC4.13□□□□□ -1.75
Hcn1O88704 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC4.13□□□□□ -1.75
Hcn1O88704 Gm14067-201ENSMUST00000119340 314 ntBASIC4.13□□□□□ -1.75
Hcn1O88704 Gm14903-201ENSMUST00000122435 537 ntBASIC4.13□□□□□ -1.75
Hcn1O88704 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC4.13□□□□□ -1.75
Hcn1O88704 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC4.13□□□□□ -1.75
Hcn1O88704 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Hcn1O88704 Ugt2a2-202ENSMUST00000144144 929 ntTSL 2 BASIC4.13□□□□□ -1.75
Hcn1O88704 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC4.13□□□□□ -1.75
Hcn1O88704 Gm22536-201ENSMUST00000158171 134 ntBASIC4.13□□□□□ -1.75
Hcn1O88704 Snrpe-201ENSMUST00000164096 669 ntTSL 2 BASIC4.13□□□□□ -1.75
Hcn1O88704 Gm3084-201ENSMUST00000169967 598 ntBASIC4.13□□□□□ -1.75
Hcn1O88704 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC4.13□□□□□ -1.75
Hcn1O88704 Gm6113-201ENSMUST00000180319 639 ntBASIC4.13□□□□□ -1.75
Hcn1O88704 Rian-211ENSMUST00000182737 699 ntTSL 3 BASIC4.13□□□□□ -1.75
Hcn1O88704 Mir6943-201ENSMUST00000185186 66 ntBASIC4.13□□□□□ -1.75
Hcn1O88704 Gm27964-201ENSMUST00000185195 62 ntBASIC4.13□□□□□ -1.75
Hcn1O88704 Gm7967-201ENSMUST00000190991 399 ntTSL 3 BASIC4.13□□□□□ -1.75
Hcn1O88704 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC4.13□□□□□ -1.75
Hcn1O88704 Gm37670-201ENSMUST00000193622 229 ntBASIC4.13□□□□□ -1.75
Hcn1O88704 Gm38098-201ENSMUST00000194115 241 ntBASIC4.13□□□□□ -1.75
Hcn1O88704 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Hcn1O88704 Gm37601-201ENSMUST00000194922 394 ntBASIC4.13□□□□□ -1.75
Hcn1O88704 Csn1s2a-202ENSMUST00000196585 762 ntAPPRIS ALT2 TSL 3 BASIC4.13□□□□□ -1.75
Hcn1O88704 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC4.13□□□□□ -1.75
Hcn1O88704 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC4.13□□□□□ -1.75
Hcn1O88704 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Hcn1O88704 Gm45081-201ENSMUST00000206281 572 ntBASIC4.13□□□□□ -1.75
Hcn1O88704 Gm30790-201ENSMUST00000208256 958 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Hcn1O88704 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC4.13□□□□□ -1.75
Hcn1O88704 AC159380.1-201ENSMUST00000218096 121 ntBASIC4.13□□□□□ -1.75
Hcn1O88704 A430103D13Rik-201ENSMUST00000220077 857 ntBASIC4.13□□□□□ -1.75
Hcn1O88704 AC154552.2-201ENSMUST00000223117 794 ntTSL 5 BASIC4.13□□□□□ -1.75
Hcn1O88704 AC168881.1-201ENSMUST00000226018 430 ntBASIC4.13□□□□□ -1.75
Hcn1O88704 AC140368.1-202ENSMUST00000226131 658 ntBASIC4.13□□□□□ -1.75
Hcn1O88704 AC164437.2-201ENSMUST00000228915 797 ntBASIC4.13□□□□□ -1.75
Hcn1O88704 Olfr437-201ENSMUST00000060243 1018 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Hcn1O88704 Csn1s2a-201ENSMUST00000076379 920 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
Hcn1O88704 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Hcn1O88704 Olfr1061-201ENSMUST00000099889 942 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Hcn1O88704 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Hcn1O88704 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC4.13□□□□□ -1.75
Hcn1O88704 Gm14406-202ENSMUST00000108945 1348 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
Hcn1O88704 AC154184.1-201ENSMUST00000224375 1620 ntBASIC4.13□□□□□ -1.75
Hcn1O88704 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC4.13□□□□□ -1.75
Hcn1O88704 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC4.13□□□□□ -1.75
Hcn1O88704 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC4.13□□□□□ -1.75
Hcn1O88704 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Hcn1O88704 Ifi208-202ENSMUST00000169857 1767 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Hcn1O88704 Gm43834-201ENSMUST00000197097 4830 ntBASIC4.12□□□□□ -1.75
Hcn1O88704 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC4.12□□□□□ -1.75
Hcn1O88704 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
Hcn1O88704 Olfr1318-205ENSMUST00000217533 3747 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Hcn1O88704 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Hcn1O88704 Gm6429-201ENSMUST00000117144 475 ntBASIC4.12□□□□□ -1.75
Hcn1O88704 Gm12852-201ENSMUST00000119478 719 ntBASIC4.12□□□□□ -1.75
Hcn1O88704 Gm14898-201ENSMUST00000120202 645 ntBASIC4.12□□□□□ -1.75
Hcn1O88704 Gm4852-201ENSMUST00000121202 729 ntBASIC4.12□□□□□ -1.75
Hcn1O88704 Gm14649-201ENSMUST00000121814 324 ntBASIC4.12□□□□□ -1.75
Hcn1O88704 Gm2182-201ENSMUST00000145243 663 ntBASIC4.12□□□□□ -1.75
Hcn1O88704 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC4.12□□□□□ -1.75
Hcn1O88704 Gm16147-201ENSMUST00000162143 373 ntBASIC4.12□□□□□ -1.75
Hcn1O88704 Gm5277-201ENSMUST00000164923 556 ntBASIC4.12□□□□□ -1.75
Hcn1O88704 Vmn1r113-201ENSMUST00000168794 894 ntTSL 5 BASIC4.12□□□□□ -1.75
Hcn1O88704 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC4.12□□□□□ -1.75
Hcn1O88704 Mir5106-201ENSMUST00000174936 73 ntBASIC4.12□□□□□ -1.75
Hcn1O88704 Gm23638-201ENSMUST00000175073 126 ntBASIC4.12□□□□□ -1.75
Hcn1O88704 Gm23158-201ENSMUST00000175076 126 ntBASIC4.12□□□□□ -1.75
Hcn1O88704 Gm22907-201ENSMUST00000175198 126 ntBASIC4.12□□□□□ -1.75
Hcn1O88704 Gm22625-201ENSMUST00000175382 126 ntBASIC4.12□□□□□ -1.75
Hcn1O88704 Gm22875-201ENSMUST00000175449 126 ntBASIC4.12□□□□□ -1.75
Hcn1O88704 Gm25197-201ENSMUST00000175516 126 ntBASIC4.12□□□□□ -1.75
Hcn1O88704 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC4.12□□□□□ -1.75
Hcn1O88704 Gm27857-201ENSMUST00000176930 126 ntBASIC4.12□□□□□ -1.75
Hcn1O88704 Gm26268-201ENSMUST00000177685 126 ntBASIC4.12□□□□□ -1.75
Hcn1O88704 Gm23681-201ENSMUST00000178821 126 ntBASIC4.12□□□□□ -1.75
Hcn1O88704 Gm19427-201ENSMUST00000183619 208 ntBASIC4.12□□□□□ -1.75
Hcn1O88704 Gm27940-201ENSMUST00000184449 98 ntBASIC4.12□□□□□ -1.75
Hcn1O88704 Gm38281-201ENSMUST00000192301 315 ntBASIC4.12□□□□□ -1.75
Hcn1O88704 Gm37209-201ENSMUST00000194109 1276 ntBASIC4.12□□□□□ -1.75
Hcn1O88704 2900037B21Rik-201ENSMUST00000194352 337 ntBASIC4.12□□□□□ -1.75
Hcn1O88704 Gm38008-201ENSMUST00000195333 518 ntBASIC4.12□□□□□ -1.75
Hcn1O88704 Gm43841-201ENSMUST00000199491 586 ntBASIC4.12□□□□□ -1.75
Hcn1O88704 Csn2-209ENSMUST00000199624 890 ntAPPRIS P3 TSL 5 BASIC4.12□□□□□ -1.75
Hcn1O88704 Gm4734-201ENSMUST00000200117 777 ntBASIC4.12□□□□□ -1.75
Hcn1O88704 Trav7-5-201ENSMUST00000200609 337 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Hcn1O88704 Gm43892-201ENSMUST00000204373 265 ntBASIC4.12□□□□□ -1.75
Hcn1O88704 Olfr485-201ENSMUST00000208296 954 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Hcn1O88704 Gm46190-201ENSMUST00000219650 427 ntBASIC4.12□□□□□ -1.75
Hcn1O88704 AC154548.1-201ENSMUST00000225844 3838 ntBASIC4.12□□□□□ -1.75
Hcn1O88704 Olfr776-201ENSMUST00000073704 939 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Hcn1O88704 Olfr136-201ENSMUST00000077203 939 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Hcn1O88704 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 297 ms