Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 AC138284.1-201ENSMUST00000214258 3236 ntBASIC7.33□□□□□ -1.24
Trim35Q8C006 Gm19272-202ENSMUST00000185181 2217 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Trim35Q8C006 Slc22a8-202ENSMUST00000170817 3398 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Trim35Q8C006 Gm26861-201ENSMUST00000180807 5278 ntTSL 5 BASIC7.33□□□□□ -1.24
Trim35Q8C006 Wdr20-201ENSMUST00000095410 2384 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Trim35Q8C006 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Trim35Q8C006 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Trim35Q8C006 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Trim35Q8C006 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Trim35Q8C006 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Trim35Q8C006 Gm42885-201ENSMUST00000200763 4214 ntBASIC7.33□□□□□ -1.24
Trim35Q8C006 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
Trim35Q8C006 Scn3a-201ENSMUST00000066432 9560 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Trim35Q8C006 Pik3r3-201ENSMUST00000030464 5257 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Trim35Q8C006 Gm1141-201ENSMUST00000101495 2147 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Trim35Q8C006 Mapk1ip1l-202ENSMUST00000166743 4542 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Trim35Q8C006 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Trim35Q8C006 Serpina12-201ENSMUST00000043915 3690 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trim35Q8C006 AC135119.1-202ENSMUST00000228435 2203 ntBASIC7.32□□□□□ -1.24
Trim35Q8C006 Lmbrd2-204ENSMUST00000227556 8099 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Trim35Q8C006 AC164437.5-201ENSMUST00000227235 4414 ntBASIC7.32□□□□□ -1.24
Trim35Q8C006 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trim35Q8C006 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC7.32□□□□□ -1.24
Trim35Q8C006 Asap1-206ENSMUST00000175799 4237 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
Trim35Q8C006 Wdr76-204ENSMUST00000110603 2341 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
Trim35Q8C006 CT009757.6-201ENSMUST00000220661 2312 ntBASIC7.32□□□□□ -1.24
Trim35Q8C006 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
Trim35Q8C006 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Trim35Q8C006 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trim35Q8C006 Gm11584-201ENSMUST00000120636 325 ntBASIC7.32□□□□□ -1.24
Trim35Q8C006 Gm15786-201ENSMUST00000121079 450 ntBASIC7.32□□□□□ -1.24
Trim35Q8C006 Gm14110-201ENSMUST00000127688 758 ntTSL 5 BASIC7.32□□□□□ -1.24
Trim35Q8C006 Gm12107-201ENSMUST00000132857 889 ntTSL 5 BASIC7.32□□□□□ -1.24
Trim35Q8C006 Gm14376-201ENSMUST00000145297 297 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Trim35Q8C006 Gm9697-201ENSMUST00000147052 997 ntBASIC7.32□□□□□ -1.24
Trim35Q8C006 Gm3191-201ENSMUST00000167139 346 ntBASIC7.32□□□□□ -1.24
Trim35Q8C006 Gm5445-201ENSMUST00000180224 480 ntBASIC7.32□□□□□ -1.24
Trim35Q8C006 Gm29477-201ENSMUST00000189860 499 ntTSL 5 BASIC7.32□□□□□ -1.24
Trim35Q8C006 Gm9251-201ENSMUST00000197202 628 ntBASIC7.32□□□□□ -1.24
Trim35Q8C006 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC7.32□□□□□ -1.24
Trim35Q8C006 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC7.32□□□□□ -1.24
Trim35Q8C006 Gm32816-202ENSMUST00000206497 496 ntTSL 5 BASIC7.32□□□□□ -1.24
Trim35Q8C006 BC024386-202ENSMUST00000209496 851 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Trim35Q8C006 AC131660.1-201ENSMUST00000215630 1062 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Trim35Q8C006 AC099578.1-201ENSMUST00000220147 435 ntBASIC7.32□□□□□ -1.24
Trim35Q8C006 AC110176.1-201ENSMUST00000226219 504 ntBASIC7.32□□□□□ -1.24
Trim35Q8C006 AC140267.1-201ENSMUST00000226485 213 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Trim35Q8C006 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC7.32□□□□□ -1.24
Trim35Q8C006 Mef2c-227ENSMUST00000199432 3498 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Trim35Q8C006 Gm18313-201ENSMUST00000221036 1784 ntBASIC7.32□□□□□ -1.24
Trim35Q8C006 Psg18-202ENSMUST00000098783 1783 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Trim35Q8C006 Gm44668-201ENSMUST00000207911 3265 ntBASIC7.32□□□□□ -1.24
Trim35Q8C006 Rbfox1-201ENSMUST00000056416 4084 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trim35Q8C006 Prkd3-208ENSMUST00000168887 5884 ntAPPRIS P3 TSL 5 BASIC7.32□□□□□ -1.24
Trim35Q8C006 Olfr472-201ENSMUST00000209670 5290 ntAPPRIS P1 TSL 3 BASIC7.32□□□□□ -1.24
Trim35Q8C006 Csmd1-201ENSMUST00000082104 14182 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trim35Q8C006 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Trim35Q8C006 AC123954.1-201ENSMUST00000222404 3272 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Trim35Q8C006 Olfr1317-204ENSMUST00000216988 2488 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Trim35Q8C006 Robo2-202ENSMUST00000117200 5988 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Trim35Q8C006 Gm21671-201ENSMUST00000162387 2421 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Trim35Q8C006 1110002J07Rik-201ENSMUST00000181710 2229 ntTSL 5 BASIC7.31□□□□□ -1.24
Trim35Q8C006 Gm43283-201ENSMUST00000199138 2548 ntBASIC7.31□□□□□ -1.24
Trim35Q8C006 Il1f5-201ENSMUST00000028360 2842 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Trim35Q8C006 Tbc1d23-203ENSMUST00000226586 3112 ntBASIC7.31□□□□□ -1.24
Trim35Q8C006 Gm29824-201ENSMUST00000213183 3285 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Trim35Q8C006 Gm26500-201ENSMUST00000101867 106 ntBASIC7.31□□□□□ -1.24
Trim35Q8C006 Mir503-201ENSMUST00000102168 71 ntBASIC7.31□□□□□ -1.24
Trim35Q8C006 Igkv2-137-201ENSMUST00000103302 501 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Trim35Q8C006 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Trim35Q8C006 Igkv4-59-201ENSMUST00000103354 368 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Trim35Q8C006 Ighv14-1-201ENSMUST00000103463 351 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Trim35Q8C006 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC7.31□□□□□ -1.24
Trim35Q8C006 Gm22470-201ENSMUST00000104117 130 ntBASIC7.31□□□□□ -1.24
Trim35Q8C006 Olfr337-ps1-201ENSMUST00000120380 456 ntBASIC7.31□□□□□ -1.24
Trim35Q8C006 Itih5l-ps-201ENSMUST00000145639 3964 ntBASIC7.31□□□□□ -1.24
Trim35Q8C006 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Trim35Q8C006 Gm29613-201ENSMUST00000185846 313 ntBASIC7.31□□□□□ -1.24
Trim35Q8C006 1700028M03Rik-201ENSMUST00000185938 476 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Trim35Q8C006 Gm29452-201ENSMUST00000187996 313 ntBASIC7.31□□□□□ -1.24
Trim35Q8C006 Gm29544-201ENSMUST00000188860 313 ntBASIC7.31□□□□□ -1.24
Trim35Q8C006 Gm29489-201ENSMUST00000188934 324 ntBASIC7.31□□□□□ -1.24
Trim35Q8C006 Gm28808-201ENSMUST00000190978 313 ntBASIC7.31□□□□□ -1.24
Trim35Q8C006 Mef2c-213ENSMUST00000197681 2753 ntTSL 5 BASIC7.31□□□□□ -1.24
Trim35Q8C006 Hcfc1r1-ps1-201ENSMUST00000198911 346 ntBASIC7.31□□□□□ -1.24
Trim35Q8C006 Gm44418-201ENSMUST00000204219 705 ntTSL 3 BASIC7.31□□□□□ -1.24
Trim35Q8C006 Gm45122-201ENSMUST00000206376 784 ntBASIC7.31□□□□□ -1.24
Trim35Q8C006 Olfr537-ps1-201ENSMUST00000209871 2792 ntAPPRIS P1 TSL 3 BASIC7.31□□□□□ -1.24
Trim35Q8C006 Olfr1047-202ENSMUST00000216056 2450 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Trim35Q8C006 Gm32899-201ENSMUST00000219694 207 ntBASIC7.31□□□□□ -1.24
Trim35Q8C006 CT009550.2-201ENSMUST00000228851 399 ntBASIC7.31□□□□□ -1.24
Trim35Q8C006 Gml-201ENSMUST00000096400 957 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Trim35Q8C006 Trp63-202ENSMUST00000065523 5257 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Trim35Q8C006 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Trim35Q8C006 Ganab-201ENSMUST00000096246 3862 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Trim35Q8C006 Ccr2-203ENSMUST00000168841 5728 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Trim35Q8C006 AC153801.2-201ENSMUST00000219875 3372 ntBASIC7.31□□□□□ -1.24
Trim35Q8C006 Gm14886-201ENSMUST00000117208 2629 ntBASIC7.31□□□□□ -1.24
Trim35Q8C006 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Trim35Q8C006 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 88.7 ms