Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 CT010506.2-201ENSMUST00000225618 183 ntBASIC5.23□□□□□ -1.57
Msx2Q03358 5430402E10Rik-201ENSMUST00000063127 798 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Msx2Q03358 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Msx2Q03358 Gm23627-201ENSMUST00000082459 107 ntBASIC5.23□□□□□ -1.57
Msx2Q03358 Gm22502-201ENSMUST00000082488 107 ntBASIC5.23□□□□□ -1.57
Msx2Q03358 Gm24149-201ENSMUST00000082757 107 ntBASIC5.23□□□□□ -1.57
Msx2Q03358 Gm22423-201ENSMUST00000082861 184 ntBASIC5.23□□□□□ -1.57
Msx2Q03358 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Msx2Q03358 AC164102.1-201ENSMUST00000220524 1553 ntBASIC5.23□□□□□ -1.57
Msx2Q03358 Gm10933-201ENSMUST00000221891 1861 ntBASIC5.23□□□□□ -1.57
Msx2Q03358 Olfr1242-202ENSMUST00000111540 2189 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
Msx2Q03358 Epha7-203ENSMUST00000108191 6615 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Msx2Q03358 C130073E24Rik-202ENSMUST00000211313 14112 ntTSL 5 BASIC5.23□□□□□ -1.57
Msx2Q03358 Maoa-201ENSMUST00000026013 4167 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Msx2Q03358 Pkhd1-201ENSMUST00000088448 12935 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Msx2Q03358 5530601H04Rik-207ENSMUST00000138460 3732 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Msx2Q03358 Olfr49-202ENSMUST00000216214 5717 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Msx2Q03358 Gm43718-201ENSMUST00000197524 1857 ntBASIC5.22□□□□□ -1.57
Msx2Q03358 Gm12794-201ENSMUST00000052027 1452 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Msx2Q03358 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Msx2Q03358 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
Msx2Q03358 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Msx2Q03358 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC5.22□□□□□ -1.57
Msx2Q03358 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC5.22□□□□□ -1.57
Msx2Q03358 Gm13475-201ENSMUST00000119290 234 ntBASIC5.22□□□□□ -1.57
Msx2Q03358 Gm14655-201ENSMUST00000120124 578 ntBASIC5.22□□□□□ -1.57
Msx2Q03358 Gm15387-201ENSMUST00000120421 648 ntBASIC5.22□□□□□ -1.57
Msx2Q03358 Gm11805-201ENSMUST00000121238 600 ntBASIC5.22□□□□□ -1.57
Msx2Q03358 Gm14972-201ENSMUST00000121780 364 ntBASIC5.22□□□□□ -1.57
Msx2Q03358 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Msx2Q03358 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Msx2Q03358 Gm14223-201ENSMUST00000146060 517 ntTSL 3 BASIC5.22□□□□□ -1.57
Msx2Q03358 Gm22223-201ENSMUST00000157360 125 ntBASIC5.22□□□□□ -1.57
Msx2Q03358 Gm22867-201ENSMUST00000157499 109 ntBASIC5.22□□□□□ -1.57
Msx2Q03358 Gm25706-201ENSMUST00000157828 247 ntBASIC5.22□□□□□ -1.57
Msx2Q03358 Gm17538-201ENSMUST00000168236 327 ntBASIC5.22□□□□□ -1.57
Msx2Q03358 Gm3170-201ENSMUST00000168753 850 ntBASIC5.22□□□□□ -1.57
Msx2Q03358 Gm27512-201ENSMUST00000175328 126 ntBASIC5.22□□□□□ -1.57
Msx2Q03358 Obox3-ps6-201ENSMUST00000176273 1005 ntBASIC5.22□□□□□ -1.57
Msx2Q03358 Gm3348-201ENSMUST00000177813 850 ntBASIC5.22□□□□□ -1.57
Msx2Q03358 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC5.22□□□□□ -1.57
Msx2Q03358 Gm24306-201ENSMUST00000180229 79 ntBASIC5.22□□□□□ -1.57
Msx2Q03358 Gm27803-201ENSMUST00000183763 119 ntBASIC5.22□□□□□ -1.57
Msx2Q03358 Gm28390-201ENSMUST00000185212 700 ntBASIC5.22□□□□□ -1.57
Msx2Q03358 Gm28257-201ENSMUST00000185244 463 ntBASIC5.22□□□□□ -1.57
Msx2Q03358 Gm28840-203ENSMUST00000187128 975 ntTSL 5 BASIC5.22□□□□□ -1.57
Msx2Q03358 Ly6a-203ENSMUST00000187171 853 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Msx2Q03358 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Msx2Q03358 Gm37381-201ENSMUST00000192427 899 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Msx2Q03358 Gm5842-201ENSMUST00000195073 622 ntBASIC5.22□□□□□ -1.57
Msx2Q03358 Gm43083-201ENSMUST00000199594 476 ntBASIC5.22□□□□□ -1.57
Msx2Q03358 Gm45048-201ENSMUST00000207058 429 ntBASIC5.22□□□□□ -1.57
Msx2Q03358 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC5.22□□□□□ -1.57
Msx2Q03358 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC5.22□□□□□ -1.57
Msx2Q03358 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC5.22□□□□□ -1.57
Msx2Q03358 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
Msx2Q03358 Gm35188-201ENSMUST00000218869 535 ntTSL 3 BASIC5.22□□□□□ -1.57
Msx2Q03358 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC5.22□□□□□ -1.57
Msx2Q03358 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Msx2Q03358 AC166369.2-201ENSMUST00000228403 308 ntBASIC5.22□□□□□ -1.57
Msx2Q03358 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Msx2Q03358 Orm3-201ENSMUST00000006687 773 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Msx2Q03358 Gm22572-201ENSMUST00000082985 105 ntBASIC5.22□□□□□ -1.57
Msx2Q03358 Gm5518-201ENSMUST00000084171 648 ntBASIC5.22□□□□□ -1.57
Msx2Q03358 Gm6990-201ENSMUST00000086830 348 ntBASIC5.22□□□□□ -1.57
Msx2Q03358 Kcnt2-202ENSMUST00000120709 5790 ntTSL 5 BASIC5.22□□□□□ -1.57
Msx2Q03358 Dlg1-204ENSMUST00000115196 3418 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Msx2Q03358 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Msx2Q03358 AC154184.1-201ENSMUST00000224375 1620 ntBASIC5.22□□□□□ -1.57
Msx2Q03358 AC116557.1-201ENSMUST00000219494 1521 ntBASIC5.22□□□□□ -1.57
Msx2Q03358 Olfr391-ps-201ENSMUST00000214485 2080 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
Msx2Q03358 Olfr1500-201ENSMUST00000067670 2092 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Msx2Q03358 Gm37760-201ENSMUST00000194726 3841 ntBASIC5.22□□□□□ -1.57
Msx2Q03358 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Msx2Q03358 Gm17308-201ENSMUST00000181749 1997 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Msx2Q03358 Gm37244-201ENSMUST00000191748 1981 ntBASIC5.22□□□□□ -1.57
Msx2Q03358 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.57
Msx2Q03358 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Msx2Q03358 Gm35755-201ENSMUST00000222392 2077 ntBASIC5.21□□□□□ -1.58
Msx2Q03358 Gm32592-201ENSMUST00000205146 3124 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Msx2Q03358 Gm25097-201ENSMUST00000104042 145 ntBASIC5.21□□□□□ -1.58
Msx2Q03358 Gm14744-201ENSMUST00000114039 800 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Msx2Q03358 Gm11908-201ENSMUST00000117755 347 ntBASIC5.21□□□□□ -1.58
Msx2Q03358 Gm11346-201ENSMUST00000118346 704 ntBASIC5.21□□□□□ -1.58
Msx2Q03358 Gm13228-201ENSMUST00000118937 634 ntBASIC5.21□□□□□ -1.58
Msx2Q03358 Gm14761-201ENSMUST00000121363 262 ntBASIC5.21□□□□□ -1.58
Msx2Q03358 Gm2020-201ENSMUST00000145242 579 ntBASIC5.21□□□□□ -1.58
Msx2Q03358 Gm22492-201ENSMUST00000157192 297 ntBASIC5.21□□□□□ -1.58
Msx2Q03358 Gm26350-201ENSMUST00000157531 288 ntBASIC5.21□□□□□ -1.58
Msx2Q03358 Gm25846-201ENSMUST00000158013 135 ntBASIC5.21□□□□□ -1.58
Msx2Q03358 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Msx2Q03358 Olfr753-ps1-202ENSMUST00000174673 919 ntBASIC5.21□□□□□ -1.58
Msx2Q03358 Gm20656-201ENSMUST00000176925 518 ntBASIC5.21□□□□□ -1.58
Msx2Q03358 Obox3-ps2-201ENSMUST00000177243 1004 ntBASIC5.21□□□□□ -1.58
Msx2Q03358 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Msx2Q03358 Gm27694-201ENSMUST00000184740 86 ntBASIC5.21□□□□□ -1.58
Msx2Q03358 Trav1-202ENSMUST00000185651 329 ntAPPRIS ALT2 BASIC5.21□□□□□ -1.58
Msx2Q03358 Gm29229-201ENSMUST00000188874 323 ntBASIC5.21□□□□□ -1.58
Msx2Q03358 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC5.21□□□□□ -1.58
Msx2Q03358 Gm37065-201ENSMUST00000191636 444 ntTSL 2 BASIC5.21□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms