Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
Sox1P53783 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Sox1P53783 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Sox1P53783 Akap11-202ENSMUST00000123853 9364 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.5
Sox1P53783 Gm42755-201ENSMUST00000198533 1493 ntBASIC5.71□□□□□ -1.5
Sox1P53783 2700078F05Rik-201ENSMUST00000194331 3244 ntBASIC5.7□□□□□ -1.5
Sox1P53783 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Sox1P53783 Gm37760-201ENSMUST00000194726 3841 ntBASIC5.7□□□□□ -1.5
Sox1P53783 Gm37183-201ENSMUST00000191712 3405 ntBASIC5.7□□□□□ -1.5
Sox1P53783 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Sox1P53783 Olfr1458-202ENSMUST00000215160 1914 ntAPPRIS P5 TSL 5 BASIC5.7□□□□□ -1.5
Sox1P53783 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Sox1P53783 Enox2-209ENSMUST00000167659 3632 ntTSL 5 BASIC5.7□□□□□ -1.5
Sox1P53783 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Sox1P53783 Slc24a2-203ENSMUST00000107157 10531 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Sox1P53783 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Sox1P53783 Gm11912-201ENSMUST00000117235 264 ntBASIC5.7□□□□□ -1.5
Sox1P53783 Gm13650-201ENSMUST00000117729 433 ntBASIC5.7□□□□□ -1.5
Sox1P53783 Gm11774-201ENSMUST00000118601 293 ntBASIC5.7□□□□□ -1.5
Sox1P53783 4933401B06Rik-201ENSMUST00000139758 1155 ntBASIC5.7□□□□□ -1.5
Sox1P53783 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC5.7□□□□□ -1.5
Sox1P53783 Gm25962-201ENSMUST00000157173 168 ntBASIC5.7□□□□□ -1.5
Sox1P53783 Gm26085-201ENSMUST00000157900 116 ntBASIC5.7□□□□□ -1.5
Sox1P53783 Gm16038-201ENSMUST00000159317 193 ntBASIC5.7□□□□□ -1.5
Sox1P53783 Calml4-202ENSMUST00000163820 699 ntTSL 2 BASIC5.7□□□□□ -1.5
Sox1P53783 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC5.7□□□□□ -1.5
Sox1P53783 Gm23047-201ENSMUST00000177661 94 ntBASIC5.7□□□□□ -1.5
Sox1P53783 Gm21978-201ENSMUST00000179696 377 ntBASIC5.7□□□□□ -1.5
Sox1P53783 Gm27690-201ENSMUST00000184596 126 ntBASIC5.7□□□□□ -1.5
Sox1P53783 Mug-ps1-203ENSMUST00000190643 655 ntTSL 3 BASIC5.7□□□□□ -1.5
Sox1P53783 Gm21088-201ENSMUST00000190875 316 ntBASIC5.7□□□□□ -1.5
Sox1P53783 Gm28408-201ENSMUST00000191557 463 ntBASIC5.7□□□□□ -1.5
Sox1P53783 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Sox1P53783 Gm8953-201ENSMUST00000198497 904 ntTSL 5 BASIC5.7□□□□□ -1.5
Sox1P53783 Gm45387-201ENSMUST00000209792 632 ntBASIC5.7□□□□□ -1.5
Sox1P53783 Gm45883-201ENSMUST00000210131 853 ntTSL 3 BASIC5.7□□□□□ -1.5
Sox1P53783 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC5.7□□□□□ -1.5
Sox1P53783 Gm18488-201ENSMUST00000215082 364 ntBASIC5.7□□□□□ -1.5
Sox1P53783 Gm18541-201ENSMUST00000215935 538 ntBASIC5.7□□□□□ -1.5
Sox1P53783 AC159380.1-201ENSMUST00000218096 121 ntBASIC5.7□□□□□ -1.5
Sox1P53783 AC154224.1-201ENSMUST00000224367 403 ntBASIC5.7□□□□□ -1.5
Sox1P53783 Morn2-201ENSMUST00000061703 644 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Sox1P53783 Gm23679-201ENSMUST00000083161 119 ntBASIC5.7□□□□□ -1.5
Sox1P53783 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Sox1P53783 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
Sox1P53783 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC5.7□□□□□ -1.5
Sox1P53783 Gm37894-201ENSMUST00000195416 2599 ntBASIC5.7□□□□□ -1.5
Sox1P53783 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Sox1P53783 Vmn2r4-201ENSMUST00000170280 2484 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
Sox1P53783 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC5.7□□□□□ -1.5
Sox1P53783 1810018F18Rik-203ENSMUST00000189764 1325 ntBASIC5.7□□□□□ -1.5
Sox1P53783 Mef2c-203ENSMUST00000185052 3556 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Sox1P53783 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
Sox1P53783 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC5.69□□□□□ -1.5
Sox1P53783 Vmn2r77-201ENSMUST00000164996 2565 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Sox1P53783 Gm43502-201ENSMUST00000200263 2596 ntBASIC5.69□□□□□ -1.5
Sox1P53783 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Sox1P53783 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
Sox1P53783 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC5.69□□□□□ -1.5
Sox1P53783 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Sox1P53783 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Sox1P53783 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC5.69□□□□□ -1.5
Sox1P53783 Gm38198-201ENSMUST00000191772 3581 ntBASIC5.69□□□□□ -1.5
Sox1P53783 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
Sox1P53783 Gm14391-204ENSMUST00000109058 1854 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
Sox1P53783 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Sox1P53783 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Sox1P53783 Gm24715-201ENSMUST00000102377 95 ntBASIC5.69□□□□□ -1.5
Sox1P53783 Gm22021-201ENSMUST00000104353 107 ntBASIC5.69□□□□□ -1.5
Sox1P53783 Gm22899-201ENSMUST00000104540 131 ntBASIC5.69□□□□□ -1.5
Sox1P53783 Gm16106-201ENSMUST00000119187 294 ntBASIC5.69□□□□□ -1.5
Sox1P53783 Gm2005-201ENSMUST00000120759 542 ntBASIC5.69□□□□□ -1.5
Sox1P53783 Gm15168-201ENSMUST00000121057 316 ntBASIC5.69□□□□□ -1.5
Sox1P53783 Gm14736-201ENSMUST00000121470 336 ntBASIC5.69□□□□□ -1.5
Sox1P53783 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
Sox1P53783 Rpl39-ps-201ENSMUST00000142604 355 ntBASIC5.69□□□□□ -1.5
Sox1P53783 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Sox1P53783 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Sox1P53783 Gm23534-201ENSMUST00000157539 97 ntBASIC5.69□□□□□ -1.5
Sox1P53783 Gm24217-201ENSMUST00000158260 133 ntBASIC5.69□□□□□ -1.5
Sox1P53783 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Sox1P53783 Gm14527-201ENSMUST00000179300 639 ntBASIC5.69□□□□□ -1.5
Sox1P53783 Gm27016-201ENSMUST00000183294 715 ntTSL 5 BASIC5.69□□□□□ -1.5
Sox1P53783 Mir6960-201ENSMUST00000183449 61 ntBASIC5.69□□□□□ -1.5
Sox1P53783 Gm2367-201ENSMUST00000192374 472 ntBASIC5.69□□□□□ -1.5
Sox1P53783 Gm37838-201ENSMUST00000194464 312 ntBASIC5.69□□□□□ -1.5
Sox1P53783 Gm38008-201ENSMUST00000195333 518 ntBASIC5.69□□□□□ -1.5
Sox1P53783 Gm22897-201ENSMUST00000197860 128 ntBASIC5.69□□□□□ -1.5
Sox1P53783 Gm43941-201ENSMUST00000203303 1073 ntBASIC5.69□□□□□ -1.5
Sox1P53783 Gm44161-201ENSMUST00000203532 253 ntBASIC5.69□□□□□ -1.5
Sox1P53783 Gm9278-201ENSMUST00000205508 553 ntBASIC5.69□□□□□ -1.5
Sox1P53783 Gm44757-201ENSMUST00000206373 157 ntBASIC5.69□□□□□ -1.5
Sox1P53783 Ankrd42-207ENSMUST00000207131 1220 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Sox1P53783 Gm45814-201ENSMUST00000212646 775 ntBASIC5.69□□□□□ -1.5
Sox1P53783 AC152415.1-201ENSMUST00000213320 440 ntBASIC5.69□□□□□ -1.5
Sox1P53783 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC5.69□□□□□ -1.5
Sox1P53783 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Sox1P53783 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC5.69□□□□□ -1.5
Sox1P53783 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Sox1P53783 Olfr748-201ENSMUST00000073561 924 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms