Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 AC134468.2-201ENSMUST00000222549 672 ntBASIC4.91□□□□□ -1.62
Traf1P39428 Gm2001-201ENSMUST00000223236 503 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Traf1P39428 AC091783.4-201ENSMUST00000224940 611 ntBASIC4.91□□□□□ -1.62
Traf1P39428 AC130547.1-201ENSMUST00000228079 1047 ntBASIC4.91□□□□□ -1.62
Traf1P39428 Vmn1r231-201ENSMUST00000061278 936 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Traf1P39428 Olfr196-201ENSMUST00000077027 930 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Traf1P39428 Prl3d2-201ENSMUST00000080755 853 ntAPPRIS P2 TSL 5 BASIC4.91□□□□□ -1.62
Traf1P39428 AC155922.2-201ENSMUST00000220240 1458 ntTSL 5 BASIC4.91□□□□□ -1.62
Traf1P39428 AC120375.2-201ENSMUST00000226532 1853 ntBASIC4.91□□□□□ -1.62
Traf1P39428 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
Traf1P39428 Zfp808-201ENSMUST00000099449 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Traf1P39428 AC147615.2-201ENSMUST00000219876 2154 ntBASIC4.91□□□□□ -1.62
Traf1P39428 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Traf1P39428 Gm8297-202ENSMUST00000171964 1759 ntAPPRIS P5 TSL 5 BASIC4.91□□□□□ -1.62
Traf1P39428 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
Traf1P39428 AC113059.2-201ENSMUST00000213462 3016 ntBASIC4.9□□□□□ -1.62
Traf1P39428 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Traf1P39428 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Traf1P39428 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Traf1P39428 Mir551b-201ENSMUST00000102165 98 ntBASIC4.9□□□□□ -1.63
Traf1P39428 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Traf1P39428 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Traf1P39428 Gm22269-201ENSMUST00000104002 130 ntBASIC4.9□□□□□ -1.63
Traf1P39428 Vmn1r120-201ENSMUST00000105202 918 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Traf1P39428 Gm12067-201ENSMUST00000119755 1148 ntBASIC4.9□□□□□ -1.63
Traf1P39428 Gm7363-201ENSMUST00000119883 399 ntBASIC4.9□□□□□ -1.63
Traf1P39428 Gm14383-201ENSMUST00000121637 386 ntBASIC4.9□□□□□ -1.63
Traf1P39428 Gm9003-201ENSMUST00000121810 482 ntBASIC4.9□□□□□ -1.63
Traf1P39428 Klra11-ps-201ENSMUST00000122033 810 ntBASIC4.9□□□□□ -1.63
Traf1P39428 Gm25965-201ENSMUST00000157170 93 ntBASIC4.9□□□□□ -1.63
Traf1P39428 Gm22156-201ENSMUST00000158409 141 ntBASIC4.9□□□□□ -1.63
Traf1P39428 Gm16026-202ENSMUST00000159695 772 ntBASIC4.9□□□□□ -1.63
Traf1P39428 Gm17109-201ENSMUST00000163985 358 ntBASIC4.9□□□□□ -1.63
Traf1P39428 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Traf1P39428 Malat1-203ENSMUST00000173499 485 ntTSL 3 BASIC4.9□□□□□ -1.63
Traf1P39428 Vmn1r-ps17-201ENSMUST00000175797 894 ntBASIC4.9□□□□□ -1.63
Traf1P39428 Gm37111-201ENSMUST00000193250 634 ntBASIC4.9□□□□□ -1.63
Traf1P39428 Gm21006-201ENSMUST00000196930 667 ntBASIC4.9□□□□□ -1.63
Traf1P39428 Gm43855-201ENSMUST00000197462 507 ntBASIC4.9□□□□□ -1.63
Traf1P39428 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC4.9□□□□□ -1.63
Traf1P39428 AU023762-202ENSMUST00000209716 961 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Traf1P39428 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Traf1P39428 Gm18891-201ENSMUST00000216734 1087 ntBASIC4.9□□□□□ -1.63
Traf1P39428 Olfr153-201ENSMUST00000217113 1258 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Traf1P39428 AC131677.1-201ENSMUST00000218721 535 ntBASIC4.9□□□□□ -1.63
Traf1P39428 Gm31931-201ENSMUST00000219666 222 ntBASIC4.9□□□□□ -1.63
Traf1P39428 AC160931.2-201ENSMUST00000221445 351 ntBASIC4.9□□□□□ -1.63
Traf1P39428 AC159293.2-201ENSMUST00000222289 424 ntBASIC4.9□□□□□ -1.63
Traf1P39428 AC102815.1-201ENSMUST00000226662 1061 ntBASIC4.9□□□□□ -1.63
Traf1P39428 AC155237.2-201ENSMUST00000228487 478 ntBASIC4.9□□□□□ -1.63
Traf1P39428 Csn1s2b-201ENSMUST00000072539 810 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
Traf1P39428 Mir34b-201ENSMUST00000083558 84 ntBASIC4.9□□□□□ -1.63
Traf1P39428 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Traf1P39428 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.63
Traf1P39428 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.63
Traf1P39428 Gm37195-201ENSMUST00000192006 3018 ntBASIC4.9□□□□□ -1.63
Traf1P39428 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Traf1P39428 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Traf1P39428 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.63
Traf1P39428 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC4.89□□□□□ -1.63
Traf1P39428 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Traf1P39428 Gm37323-201ENSMUST00000195771 2773 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Traf1P39428 Gm12087-201ENSMUST00000121878 258 ntBASIC4.89□□□□□ -1.63
Traf1P39428 Gm22204-201ENSMUST00000122654 327 ntBASIC4.89□□□□□ -1.63
Traf1P39428 Gm13092-201ENSMUST00000136346 260 ntBASIC4.89□□□□□ -1.63
Traf1P39428 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC4.89□□□□□ -1.63
Traf1P39428 Gm22816-201ENSMUST00000157450 117 ntBASIC4.89□□□□□ -1.63
Traf1P39428 Gm23205-201ENSMUST00000158671 103 ntBASIC4.89□□□□□ -1.63
Traf1P39428 Gm29634-201ENSMUST00000188467 696 ntBASIC4.89□□□□□ -1.63
Traf1P39428 Gm28699-201ENSMUST00000189193 696 ntBASIC4.89□□□□□ -1.63
Traf1P39428 Gm28788-201ENSMUST00000189717 375 ntBASIC4.89□□□□□ -1.63
Traf1P39428 Gm29558-201ENSMUST00000190134 375 ntBASIC4.89□□□□□ -1.63
Traf1P39428 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC4.89□□□□□ -1.63
Traf1P39428 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Traf1P39428 Gm8790-201ENSMUST00000194108 322 ntBASIC4.89□□□□□ -1.63
Traf1P39428 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC4.89□□□□□ -1.63
Traf1P39428 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC4.89□□□□□ -1.63
Traf1P39428 Gm39197-201ENSMUST00000212069 457 ntBASIC4.89□□□□□ -1.63
Traf1P39428 AL772397.1-201ENSMUST00000216707 606 ntBASIC4.89□□□□□ -1.63
Traf1P39428 AC167202.1-201ENSMUST00000219027 331 ntBASIC4.89□□□□□ -1.63
Traf1P39428 Gm30893-201ENSMUST00000220479 903 ntTSL 5 BASIC4.89□□□□□ -1.63
Traf1P39428 AC168059.1-201ENSMUST00000225846 841 ntBASIC4.89□□□□□ -1.63
Traf1P39428 AC154692.1-201ENSMUST00000228314 544 ntBASIC4.89□□□□□ -1.63
Traf1P39428 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Traf1P39428 Vmn1r202-201ENSMUST00000078642 909 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Traf1P39428 Olfr1242-201ENSMUST00000099777 1053 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Traf1P39428 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Traf1P39428 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC4.89□□□□□ -1.63
Traf1P39428 P2ry10-201ENSMUST00000053375 2888 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Traf1P39428 Gm45483-201ENSMUST00000209845 1682 ntBASIC4.89□□□□□ -1.63
Traf1P39428 2410012E07Rik-201ENSMUST00000190896 1357 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Traf1P39428 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Traf1P39428 Gm37747-201ENSMUST00000193717 4003 ntBASIC4.88□□□□□ -1.63
Traf1P39428 Gm16421-201ENSMUST00000117616 1557 ntBASIC4.88□□□□□ -1.63
Traf1P39428 Gm42728-201ENSMUST00000202644 1552 ntBASIC4.88□□□□□ -1.63
Traf1P39428 Nufip2-201ENSMUST00000100802 5158 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Traf1P39428 Mier1-203ENSMUST00000106855 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Traf1P39428 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Traf1P39428 Gm16383-201ENSMUST00000118122 232 ntBASIC4.88□□□□□ -1.63
Traf1P39428 Gm12757-201ENSMUST00000119465 800 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms