Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm28596-201ENSMUST00000185870 696 ntBASIC6.12□□□□□ -1.43
Col18a1P39061 Gm5116-201ENSMUST00000187732 463 ntBASIC6.12□□□□□ -1.43
Col18a1P39061 Gm29627-201ENSMUST00000187984 463 ntBASIC6.12□□□□□ -1.43
Col18a1P39061 Gm32295-201ENSMUST00000192558 696 ntBASIC6.12□□□□□ -1.43
Col18a1P39061 Gm37501-201ENSMUST00000192830 691 ntBASIC6.12□□□□□ -1.43
Col18a1P39061 Gm31260-201ENSMUST00000193478 696 ntBASIC6.12□□□□□ -1.43
Col18a1P39061 Gm42991-201ENSMUST00000196468 3837 ntBASIC6.12□□□□□ -1.43
Col18a1P39061 Gm43510-201ENSMUST00000197922 353 ntBASIC6.12□□□□□ -1.43
Col18a1P39061 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC6.12□□□□□ -1.43
Col18a1P39061 Gm17906-201ENSMUST00000202480 901 ntBASIC6.12□□□□□ -1.43
Col18a1P39061 Spam1-203ENSMUST00000202569 2107 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col18a1P39061 Gm5876-201ENSMUST00000203735 243 ntBASIC6.12□□□□□ -1.43
Col18a1P39061 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC6.12□□□□□ -1.43
Col18a1P39061 AC154510.1-201ENSMUST00000223925 737 ntBASIC6.12□□□□□ -1.43
Col18a1P39061 AC100733.1-201ENSMUST00000228494 407 ntBASIC6.12□□□□□ -1.43
Col18a1P39061 Gm25079-201ENSMUST00000082529 203 ntBASIC6.12□□□□□ -1.43
Col18a1P39061 Gm22043-201ENSMUST00000082993 158 ntBASIC6.12□□□□□ -1.43
Col18a1P39061 AC115891.1-201ENSMUST00000215798 1755 ntBASIC6.12□□□□□ -1.43
Col18a1P39061 Olfr716-206ENSMUST00000215284 3515 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Col18a1P39061 AC134917.1-201ENSMUST00000220517 1449 ntBASIC6.12□□□□□ -1.43
Col18a1P39061 AC103672.2-201ENSMUST00000228146 1687 ntBASIC6.12□□□□□ -1.43
Col18a1P39061 Olfr669-202ENSMUST00000210138 2195 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
Col18a1P39061 Dnah17-204ENSMUST00000132685 13612 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Col18a1P39061 Gm31822-201ENSMUST00000216096 2572 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Col18a1P39061 AC144772.3-201ENSMUST00000228829 3126 ntBASIC6.12□□□□□ -1.43
Col18a1P39061 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Col18a1P39061 Tcerg1-201ENSMUST00000025375 4152 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col18a1P39061 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Col18a1P39061 Erbin-202ENSMUST00000053927 6103 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Col18a1P39061 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col18a1P39061 Mir465c-2-201ENSMUST00000104757 81 ntBASIC6.11□□□□□ -1.43
Col18a1P39061 Gm14687-201ENSMUST00000120206 363 ntBASIC6.11□□□□□ -1.43
Col18a1P39061 Gm14939-201ENSMUST00000120347 680 ntBASIC6.11□□□□□ -1.43
Col18a1P39061 Gm14638-201ENSMUST00000121338 216 ntBASIC6.11□□□□□ -1.43
Col18a1P39061 Gm12724-201ENSMUST00000140196 665 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Col18a1P39061 Gm23959-201ENSMUST00000157208 324 ntBASIC6.11□□□□□ -1.43
Col18a1P39061 Gm24503-201ENSMUST00000158454 135 ntBASIC6.11□□□□□ -1.43
Col18a1P39061 Atp2b4-208ENSMUST00000167348 243 ntBASIC6.11□□□□□ -1.43
Col18a1P39061 Vmn2r-ps122-201ENSMUST00000176687 906 ntBASIC6.11□□□□□ -1.43
Col18a1P39061 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Col18a1P39061 Gm20795-201ENSMUST00000178528 699 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Col18a1P39061 Gm20773-201ENSMUST00000178940 681 ntBASIC6.11□□□□□ -1.43
Col18a1P39061 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Col18a1P39061 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Col18a1P39061 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Col18a1P39061 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Col18a1P39061 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Col18a1P39061 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC6.11□□□□□ -1.43
Col18a1P39061 Gm37173-201ENSMUST00000194498 1017 ntBASIC6.11□□□□□ -1.43
Col18a1P39061 Gm43304-201ENSMUST00000196803 326 ntBASIC6.11□□□□□ -1.43
Col18a1P39061 AC162376.1-201ENSMUST00000220120 435 ntBASIC6.11□□□□□ -1.43
Col18a1P39061 CT030704.1-201ENSMUST00000227521 699 ntBASIC6.11□□□□□ -1.43
Col18a1P39061 Vmn1r236-201ENSMUST00000066998 1121 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Col18a1P39061 Mir465c-1-201ENSMUST00000093560 81 ntBASIC6.11□□□□□ -1.43
Col18a1P39061 Ckap5-201ENSMUST00000046769 6511 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Col18a1P39061 Arhgap15-201ENSMUST00000055776 2604 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col18a1P39061 Gm38137-201ENSMUST00000193735 1401 ntBASIC6.11□□□□□ -1.43
Col18a1P39061 AC153881.3-201ENSMUST00000218494 1561 ntBASIC6.11□□□□□ -1.43
Col18a1P39061 Olfr1321-202ENSMUST00000215373 4482 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Col18a1P39061 Gm5141-201ENSMUST00000167516 1743 ntTSL 5 BASIC6.11□□□□□ -1.43
Col18a1P39061 Gm37407-201ENSMUST00000194793 1316 ntBASIC6.11□□□□□ -1.43
Col18a1P39061 Olfr1270-203ENSMUST00000215578 4982 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Col18a1P39061 Adam26b-201ENSMUST00000080135 2476 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col18a1P39061 Enpp2-204ENSMUST00000173516 2887 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Col18a1P39061 Gm22497-201ENSMUST00000104499 131 ntBASIC6.11□□□□□ -1.43
Col18a1P39061 Ap3s1-ps1-201ENSMUST00000117113 579 ntBASIC6.11□□□□□ -1.43
Col18a1P39061 Rps11-ps5-201ENSMUST00000117302 472 ntBASIC6.11□□□□□ -1.43
Col18a1P39061 Gm12335-201ENSMUST00000119738 327 ntBASIC6.11□□□□□ -1.43
Col18a1P39061 Gm9208-201ENSMUST00000120468 948 ntBASIC6.11□□□□□ -1.43
Col18a1P39061 Snrpert-201ENSMUST00000121967 279 ntBASIC6.11□□□□□ -1.43
Col18a1P39061 Gm24773-201ENSMUST00000158513 99 ntBASIC6.11□□□□□ -1.43
Col18a1P39061 Airn-203ENSMUST00000159791 485 ntTSL 3 BASIC6.11□□□□□ -1.43
Col18a1P39061 Gm27037-201ENSMUST00000182270 960 ntBASIC6.11□□□□□ -1.43
Col18a1P39061 Gm27919-201ENSMUST00000185163 107 ntBASIC6.11□□□□□ -1.43
Col18a1P39061 Gm38180-201ENSMUST00000192381 395 ntTSL 5 BASIC6.11□□□□□ -1.43
Col18a1P39061 Ighv1-41-201ENSMUST00000194414 329 ntBASIC6.11□□□□□ -1.43
Col18a1P39061 Gm5581-202ENSMUST00000204992 714 ntTSL 3 BASIC6.11□□□□□ -1.43
Col18a1P39061 Gm44910-201ENSMUST00000208451 396 ntBASIC6.11□□□□□ -1.43
Col18a1P39061 AC131677.1-201ENSMUST00000218721 535 ntBASIC6.11□□□□□ -1.43
Col18a1P39061 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Col18a1P39061 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col18a1P39061 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Col18a1P39061 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Col18a1P39061 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col18a1P39061 Abca6-201ENSMUST00000044003 5240 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Col18a1P39061 Olfr845-203ENSMUST00000215572 3446 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
Col18a1P39061 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
Col18a1P39061 Gm2888-201ENSMUST00000170521 1758 ntAPPRIS P5 TSL 5 BASIC6.1□□□□□ -1.43
Col18a1P39061 Scn3a-202ENSMUST00000100069 8550 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Col18a1P39061 Nlrp4c-204ENSMUST00000208360 3058 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Col18a1P39061 Gm18360-201ENSMUST00000173327 1524 ntBASIC6.1□□□□□ -1.43
Col18a1P39061 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Col18a1P39061 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Col18a1P39061 Gm15426-201ENSMUST00000117823 556 ntBASIC6.1□□□□□ -1.43
Col18a1P39061 Gm26256-201ENSMUST00000122499 186 ntBASIC6.1□□□□□ -1.43
Col18a1P39061 Gm3160-201ENSMUST00000128343 607 ntBASIC6.1□□□□□ -1.43
Col18a1P39061 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC6.1□□□□□ -1.43
Col18a1P39061 Gm4487-201ENSMUST00000150617 442 ntBASIC6.1□□□□□ -1.43
Col18a1P39061 Gm24314-201ENSMUST00000158274 123 ntBASIC6.1□□□□□ -1.43
Col18a1P39061 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC6.1□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms