Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Olfr564-201ENSMUST00000061096 951 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Hoxd3P09027 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
Hoxd3P09027 Gm26497-201ENSMUST00000083146 107 ntBASIC4.94□□□□□ -1.62
Hoxd3P09027 Gm5670-201ENSMUST00000093546 372 ntBASIC4.94□□□□□ -1.62
Hoxd3P09027 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
Hoxd3P09027 Rasef-201ENSMUST00000058292 5183 ntTSL 5 BASIC4.94□□□□□ -1.62
Hoxd3P09027 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Hoxd3P09027 Fap-208ENSMUST00000174234 2211 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
Hoxd3P09027 A730020M07Rik-202ENSMUST00000196621 2370 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Hoxd3P09027 Gm42940-201ENSMUST00000200361 2362 ntBASIC4.94□□□□□ -1.62
Hoxd3P09027 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Hoxd3P09027 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC4.94□□□□□ -1.62
Hoxd3P09027 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Hoxd3P09027 Lgi1-209ENSMUST00000199812 2262 ntTSL 5 BASIC4.94□□□□□ -1.62
Hoxd3P09027 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC4.94□□□□□ -1.62
Hoxd3P09027 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
Hoxd3P09027 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC4.94□□□□□ -1.62
Hoxd3P09027 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC4.94□□□□□ -1.62
Hoxd3P09027 Kat7-202ENSMUST00000092766 3414 ntTSL 5 BASIC4.94□□□□□ -1.62
Hoxd3P09027 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC4.94□□□□□ -1.62
Hoxd3P09027 Gm45250-201ENSMUST00000209414 3592 ntBASIC4.94□□□□□ -1.62
Hoxd3P09027 A330015K06Rik-202ENSMUST00000195685 2196 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Hoxd3P09027 Gm28679-201ENSMUST00000186013 1499 ntTSL 5 BASIC4.94□□□□□ -1.62
Hoxd3P09027 Gm28135-201ENSMUST00000186847 1499 ntTSL 5 BASIC4.94□□□□□ -1.62
Hoxd3P09027 Gm29547-201ENSMUST00000187258 1499 ntTSL 5 BASIC4.94□□□□□ -1.62
Hoxd3P09027 Gm28236-203ENSMUST00000188311 1499 ntTSL 5 BASIC4.94□□□□□ -1.62
Hoxd3P09027 Gm29265-201ENSMUST00000188697 1499 ntTSL 5 BASIC4.94□□□□□ -1.62
Hoxd3P09027 Gm28947-203ENSMUST00000188701 1499 ntTSL 5 BASIC4.94□□□□□ -1.62
Hoxd3P09027 Gm28842-202ENSMUST00000190289 1499 ntTSL 5 BASIC4.94□□□□□ -1.62
Hoxd3P09027 Gm28632-202ENSMUST00000191193 1499 ntTSL 5 BASIC4.94□□□□□ -1.62
Hoxd3P09027 Zfp619-201ENSMUST00000108015 5969 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Hoxd3P09027 AC156636.2-201ENSMUST00000218845 4557 ntBASIC4.94□□□□□ -1.62
Hoxd3P09027 CT025619.1-201ENSMUST00000214294 2331 ntTSL 5 BASIC4.94□□□□□ -1.62
Hoxd3P09027 Vps41-201ENSMUST00000072961 3199 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Hoxd3P09027 A230028O05Rik-201ENSMUST00000181655 2793 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Hoxd3P09027 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC4.93□□□□□ -1.62
Hoxd3P09027 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Hoxd3P09027 Gm43374-201ENSMUST00000202498 2391 ntBASIC4.93□□□□□ -1.62
Hoxd3P09027 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Hoxd3P09027 Gm37760-201ENSMUST00000194726 3841 ntBASIC4.93□□□□□ -1.62
Hoxd3P09027 Dapp1-203ENSMUST00000136613 2950 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Hoxd3P09027 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Hoxd3P09027 Gdap10-201ENSMUST00000180613 5003 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Hoxd3P09027 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
Hoxd3P09027 Gm4922-201ENSMUST00000055107 1950 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
Hoxd3P09027 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Hoxd3P09027 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Hoxd3P09027 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC4.93□□□□□ -1.62
Hoxd3P09027 Tex48-201ENSMUST00000102861 677 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Hoxd3P09027 Gm24709-201ENSMUST00000104123 132 ntBASIC4.93□□□□□ -1.62
Hoxd3P09027 Gm12303-201ENSMUST00000119506 673 ntBASIC4.93□□□□□ -1.62
Hoxd3P09027 Zc4h2-203ENSMUST00000120620 2156 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Hoxd3P09027 Gm12721-201ENSMUST00000120621 268 ntBASIC4.93□□□□□ -1.62
Hoxd3P09027 Gm14926-201ENSMUST00000120650 508 ntBASIC4.93□□□□□ -1.62
Hoxd3P09027 Gm15618-201ENSMUST00000121610 452 ntBASIC4.93□□□□□ -1.62
Hoxd3P09027 4931406B18Rik-201ENSMUST00000013497 3970 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Hoxd3P09027 Gm6374-201ENSMUST00000159051 788 ntBASIC4.93□□□□□ -1.62
Hoxd3P09027 Gm25956-201ENSMUST00000175115 217 ntBASIC4.93□□□□□ -1.62
Hoxd3P09027 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Hoxd3P09027 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Hoxd3P09027 n-R5s209-201ENSMUST00000179494 119 ntBASIC4.93□□□□□ -1.62
Hoxd3P09027 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC4.93□□□□□ -1.62
Hoxd3P09027 Gm28921-201ENSMUST00000190219 378 ntBASIC4.93□□□□□ -1.62
Hoxd3P09027 Gm10292-202ENSMUST00000193165 585 ntBASIC4.93□□□□□ -1.62
Hoxd3P09027 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC4.93□□□□□ -1.62
Hoxd3P09027 Igkv4-65-201ENSMUST00000196986 358 ntBASIC4.93□□□□□ -1.62
Hoxd3P09027 Zfp607a-202ENSMUST00000205534 3511 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Hoxd3P09027 Gm17988-201ENSMUST00000208796 535 ntBASIC4.93□□□□□ -1.62
Hoxd3P09027 Gm45327-201ENSMUST00000211612 565 ntBASIC4.93□□□□□ -1.62
Hoxd3P09027 Gm10280-201ENSMUST00000212238 2006 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Hoxd3P09027 Olfr1119-ps1-201ENSMUST00000215282 634 ntBASIC4.93□□□□□ -1.62
Hoxd3P09027 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC4.93□□□□□ -1.62
Hoxd3P09027 AC122251.2-201ENSMUST00000227341 603 ntBASIC4.93□□□□□ -1.62
Hoxd3P09027 Ogdh-201ENSMUST00000003461 4127 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Hoxd3P09027 Gm28392-201ENSMUST00000077630 393 ntBASIC4.93□□□□□ -1.62
Hoxd3P09027 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Hoxd3P09027 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Hoxd3P09027 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Hoxd3P09027 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Hoxd3P09027 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Hoxd3P09027 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Hoxd3P09027 Pkn2-206ENSMUST00000173830 2808 ntTSL 5 BASIC4.93□□□□□ -1.62
Hoxd3P09027 Tmprss11a-201ENSMUST00000101073 2657 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Hoxd3P09027 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
Hoxd3P09027 Gm38118-201ENSMUST00000192052 2222 ntBASIC4.93□□□□□ -1.62
Hoxd3P09027 Olfr235-204ENSMUST00000214613 2217 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
Hoxd3P09027 Dnhd1-203ENSMUST00000145988 14536 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Hoxd3P09027 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Hoxd3P09027 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Hoxd3P09027 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Hoxd3P09027 Olfr1355-201ENSMUST00000078414 3317 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
Hoxd3P09027 Rnf24-201ENSMUST00000059372 5978 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Hoxd3P09027 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Hoxd3P09027 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Hoxd3P09027 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Hoxd3P09027 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Hoxd3P09027 Zfp719-201ENSMUST00000058104 4494 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Hoxd3P09027 Gm37725-201ENSMUST00000193965 2125 ntBASIC4.93□□□□□ -1.62
Hoxd3P09027 Olfr2-205ENSMUST00000214105 5798 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Hoxd3P09027 Gm14245-201ENSMUST00000118939 1843 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms