Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm42680-201ENSMUST00000196238 2500 ntBASIC3.58□□□□□ -1.84
Col6a3E9PWQ3 Gm12005-201ENSMUST00000121451 379 ntBASIC3.58□□□□□ -1.84
Col6a3E9PWQ3 Gm36525-201ENSMUST00000222590 638 ntTSL 5 BASIC3.58□□□□□ -1.84
Col6a3E9PWQ3 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Col6a3E9PWQ3 Gm45635-201ENSMUST00000211516 2134 ntBASIC3.58□□□□□ -1.84
Col6a3E9PWQ3 Gm28074-201ENSMUST00000190424 1497 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Col6a3E9PWQ3 Exph5-201ENSMUST00000051014 5957 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Col6a3E9PWQ3 Polk-205ENSMUST00000221899 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
Col6a3E9PWQ3 Vmn1r214-203ENSMUST00000227652 3906 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Col6a3E9PWQ3 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Col6a3E9PWQ3 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Col6a3E9PWQ3 Lrp1-201ENSMUST00000049149 14888 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Col6a3E9PWQ3 Olfr291-202ENSMUST00000217039 3471 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
Col6a3E9PWQ3 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Col6a3E9PWQ3 Gm12087-201ENSMUST00000121878 258 ntBASIC3.58□□□□□ -1.84
Col6a3E9PWQ3 Gm20450-201ENSMUST00000173652 147 ntBASIC3.58□□□□□ -1.84
Col6a3E9PWQ3 Gm37560-201ENSMUST00000194289 1000 ntBASIC3.58□□□□□ -1.84
Col6a3E9PWQ3 Sult1e1-201ENSMUST00000031201 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Col6a3E9PWQ3 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC3.58□□□□□ -1.84
Col6a3E9PWQ3 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Col6a3E9PWQ3 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC3.58□□□□□ -1.84
Col6a3E9PWQ3 Cyp3a25-201ENSMUST00000068317 2000 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Col6a3E9PWQ3 Gm14806-201ENSMUST00000116606 2110 ntBASIC3.58□□□□□ -1.84
Col6a3E9PWQ3 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Col6a3E9PWQ3 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
Col6a3E9PWQ3 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Col6a3E9PWQ3 Gm15387-201ENSMUST00000120421 648 ntBASIC3.57□□□□□ -1.84
Col6a3E9PWQ3 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC3.57□□□□□ -1.84
Col6a3E9PWQ3 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Col6a3E9PWQ3 Gm18423-201ENSMUST00000205144 1074 ntBASIC3.57□□□□□ -1.84
Col6a3E9PWQ3 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC3.57□□□□□ -1.84
Col6a3E9PWQ3 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC3.57□□□□□ -1.84
Col6a3E9PWQ3 Gm5518-201ENSMUST00000084171 648 ntBASIC3.57□□□□□ -1.84
Col6a3E9PWQ3 Abca16-202ENSMUST00000120490 5088 ntAPPRIS P5 TSL 5 BASIC3.57□□□□□ -1.84
Col6a3E9PWQ3 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
Col6a3E9PWQ3 Vmn1r90-201ENSMUST00000185220 7144 ntAPPRIS P2 BASIC3.57□□□□□ -1.84
Col6a3E9PWQ3 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Col6a3E9PWQ3 Olfr982-201ENSMUST00000054051 5576 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Col6a3E9PWQ3 Gm15553-201ENSMUST00000118757 430 ntBASIC3.57□□□□□ -1.84
Col6a3E9PWQ3 Gm22073-201ENSMUST00000122668 189 ntBASIC3.57□□□□□ -1.84
Col6a3E9PWQ3 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Col6a3E9PWQ3 Gm24816-201ENSMUST00000175311 151 ntBASIC3.57□□□□□ -1.84
Col6a3E9PWQ3 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Col6a3E9PWQ3 Gm27783-201ENSMUST00000183534 105 ntBASIC3.57□□□□□ -1.84
Col6a3E9PWQ3 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC3.57□□□□□ -1.84
Col6a3E9PWQ3 Gm46436-201ENSMUST00000221851 1294 ntBASIC3.57□□□□□ -1.84
Col6a3E9PWQ3 Akap9-201ENSMUST00000044492 13123 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Col6a3E9PWQ3 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Col6a3E9PWQ3 Trrap-203ENSMUST00000100467 12479 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
Col6a3E9PWQ3 Gm44164-201ENSMUST00000203605 2561 ntBASIC3.57□□□□□ -1.84
Col6a3E9PWQ3 Gabrg2-201ENSMUST00000070725 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Col6a3E9PWQ3 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC3.57□□□□□ -1.84
Col6a3E9PWQ3 Mir344c-201ENSMUST00000103919 92 ntBASIC3.57□□□□□ -1.84
Col6a3E9PWQ3 Gm16171-201ENSMUST00000118004 324 ntBASIC3.57□□□□□ -1.84
Col6a3E9PWQ3 4930513N10Rik-202ENSMUST00000132616 490 ntTSL 3 BASIC3.57□□□□□ -1.84
Col6a3E9PWQ3 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC3.57□□□□□ -1.84
Col6a3E9PWQ3 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Col6a3E9PWQ3 Olfr968-201ENSMUST00000075928 1027 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Col6a3E9PWQ3 Cep170-201ENSMUST00000057037 6930 ntAPPRIS P2 TSL 5 BASIC3.57□□□□□ -1.84
Col6a3E9PWQ3 Gm43668-201ENSMUST00000197014 5342 ntBASIC3.56□□□□□ -1.84
Col6a3E9PWQ3 4930431P03Rik-202ENSMUST00000166127 4237 ntTSL 2 BASIC3.56□□□□□ -1.84
Col6a3E9PWQ3 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Col6a3E9PWQ3 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Col6a3E9PWQ3 Kif20b-201ENSMUST00000087341 5564 ntAPPRIS P2 TSL 5 BASIC3.56□□□□□ -1.84
Col6a3E9PWQ3 n-R5s201-201ENSMUST00000122622 116 ntBASIC3.56□□□□□ -1.84
Col6a3E9PWQ3 Gm24379-201ENSMUST00000122695 86 ntBASIC3.56□□□□□ -1.84
Col6a3E9PWQ3 Vmn1r-ps45-201ENSMUST00000174106 955 ntBASIC3.56□□□□□ -1.84
Col6a3E9PWQ3 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC3.56□□□□□ -1.84
Col6a3E9PWQ3 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC3.56□□□□□ -1.84
Col6a3E9PWQ3 Olfr673-ps1-201ENSMUST00000210859 411 ntBASIC3.56□□□□□ -1.84
Col6a3E9PWQ3 Gm9762-201ENSMUST00000036976 444 ntBASIC3.56□□□□□ -1.84
Col6a3E9PWQ3 Zfp72-202ENSMUST00000223163 4153 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Col6a3E9PWQ3 Wrn-201ENSMUST00000033990 5019 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Col6a3E9PWQ3 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Col6a3E9PWQ3 Rxfp1-201ENSMUST00000078527 5382 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Col6a3E9PWQ3 Olfr877-202ENSMUST00000213956 2761 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Col6a3E9PWQ3 Mroh2b-201ENSMUST00000045736 4829 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Col6a3E9PWQ3 Gm13310-201ENSMUST00000120962 1381 ntBASIC3.56□□□□□ -1.84
Col6a3E9PWQ3 Akap13-205ENSMUST00000207750 12597 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
Col6a3E9PWQ3 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Col6a3E9PWQ3 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Col6a3E9PWQ3 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Col6a3E9PWQ3 Olfr1295-202ENSMUST00000207786 1043 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Col6a3E9PWQ3 Mir670hg-207ENSMUST00000211619 819 ntTSL 5 BASIC3.56□□□□□ -1.84
Col6a3E9PWQ3 AC170999.2-201ENSMUST00000226223 264 ntBASIC3.56□□□□□ -1.84
Col6a3E9PWQ3 Dnah10-203ENSMUST00000141137 13862 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
Col6a3E9PWQ3 Olfr986-204ENSMUST00000218134 3487 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Col6a3E9PWQ3 Klhl32-203ENSMUST00000108214 5970 ntTSL 5 BASIC3.56□□□□□ -1.84
Col6a3E9PWQ3 Mrc1-201ENSMUST00000028045 5374 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Col6a3E9PWQ3 AC153964.1-201ENSMUST00000219677 3142 ntBASIC3.55□□□□□ -1.84
Col6a3E9PWQ3 Gm14901-201ENSMUST00000119001 283 ntBASIC3.55□□□□□ -1.84
Col6a3E9PWQ3 4930556G01Rik-201ENSMUST00000128925 891 ntTSL 5 BASIC3.55□□□□□ -1.84
Col6a3E9PWQ3 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC3.55□□□□□ -1.84
Col6a3E9PWQ3 Gm11281-201ENSMUST00000141391 576 ntBASIC3.55□□□□□ -1.84
Col6a3E9PWQ3 Mup8-202ENSMUST00000163931 986 ntAPPRIS P3 TSL 5 BASIC3.55□□□□□ -1.84
Col6a3E9PWQ3 AC167669.1-201ENSMUST00000224932 384 ntBASIC3.55□□□□□ -1.84
Col6a3E9PWQ3 AC157572.3-201ENSMUST00000227288 303 ntBASIC3.55□□□□□ -1.84
Col6a3E9PWQ3 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Col6a3E9PWQ3 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC3.55□□□□□ -1.84
Col6a3E9PWQ3 Celf1-207ENSMUST00000111452 7800 ntAPPRIS P4 TSL 5 BASIC3.55□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms