Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Gm15120-201ENSMUST00000120602 301 ntBASIC3.82□□□□□ -1.8
Upk3aQ9JKX8 Gm12880-201ENSMUST00000120652 494 ntBASIC3.82□□□□□ -1.8
Upk3aQ9JKX8 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Upk3aQ9JKX8 Gm15716-201ENSMUST00000162457 404 ntTSL 3 BASIC3.82□□□□□ -1.8
Upk3aQ9JKX8 Mir3104-201ENSMUST00000174911 63 ntBASIC3.82□□□□□ -1.8
Upk3aQ9JKX8 Mir1251-201ENSMUST00000175486 84 ntBASIC3.82□□□□□ -1.8
Upk3aQ9JKX8 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC3.82□□□□□ -1.8
Upk3aQ9JKX8 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC3.82□□□□□ -1.8
Upk3aQ9JKX8 4933440J02Rik-201ENSMUST00000181547 1144 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Upk3aQ9JKX8 Gm21045-201ENSMUST00000183058 1020 ntBASIC3.82□□□□□ -1.8
Upk3aQ9JKX8 1700057G04Rik-206ENSMUST00000185580 842 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Upk3aQ9JKX8 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC3.82□□□□□ -1.8
Upk3aQ9JKX8 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC3.82□□□□□ -1.8
Upk3aQ9JKX8 9430037O13Rik-201ENSMUST00000192556 1008 ntBASIC3.82□□□□□ -1.8
Upk3aQ9JKX8 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Upk3aQ9JKX8 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Upk3aQ9JKX8 Gm18944-201ENSMUST00000207672 643 ntBASIC3.82□□□□□ -1.8
Upk3aQ9JKX8 Gm32975-201ENSMUST00000211651 584 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Upk3aQ9JKX8 AC154635.1-201ENSMUST00000221433 400 ntTSL 3 BASIC3.82□□□□□ -1.8
Upk3aQ9JKX8 AC117949.2-201ENSMUST00000225900 584 ntBASIC3.82□□□□□ -1.8
Upk3aQ9JKX8 AC137961.1-201ENSMUST00000227924 734 ntBASIC3.82□□□□□ -1.8
Upk3aQ9JKX8 Vmn1r226-201ENSMUST00000061756 897 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Upk3aQ9JKX8 Olfr504-201ENSMUST00000075595 958 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Upk3aQ9JKX8 Gm23518-201ENSMUST00000082835 153 ntBASIC3.82□□□□□ -1.8
Upk3aQ9JKX8 Olfr1160-201ENSMUST00000099839 960 ntBASIC3.82□□□□□ -1.8
Upk3aQ9JKX8 Olfr101-203ENSMUST00000215392 2899 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Upk3aQ9JKX8 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC3.82□□□□□ -1.8
Upk3aQ9JKX8 Gm44678-201ENSMUST00000207828 2775 ntBASIC3.82□□□□□ -1.8
Upk3aQ9JKX8 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Upk3aQ9JKX8 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Upk3aQ9JKX8 Gm42484-201ENSMUST00000196075 2104 ntBASIC3.82□□□□□ -1.8
Upk3aQ9JKX8 AC167420.1-201ENSMUST00000222999 2121 ntBASIC3.82□□□□□ -1.8
Upk3aQ9JKX8 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
Upk3aQ9JKX8 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Upk3aQ9JKX8 Cd53-201ENSMUST00000038845 1742 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Upk3aQ9JKX8 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Upk3aQ9JKX8 2310057J18Rik-202ENSMUST00000140558 1445 ntTSL 5 BASIC3.81□□□□□ -1.8
Upk3aQ9JKX8 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Upk3aQ9JKX8 Gm37625-201ENSMUST00000194969 4872 ntBASIC3.81□□□□□ -1.8
Upk3aQ9JKX8 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Upk3aQ9JKX8 Gm4596-201ENSMUST00000117197 442 ntBASIC3.81□□□□□ -1.8
Upk3aQ9JKX8 Gm11566-201ENSMUST00000118550 203 ntBASIC3.81□□□□□ -1.8
Upk3aQ9JKX8 Gm5754-201ENSMUST00000118774 892 ntBASIC3.81□□□□□ -1.8
Upk3aQ9JKX8 Gm13459-201ENSMUST00000121558 646 ntBASIC3.81□□□□□ -1.8
Upk3aQ9JKX8 Gm25427-201ENSMUST00000157605 103 ntBASIC3.81□□□□□ -1.8
Upk3aQ9JKX8 Gm24965-201ENSMUST00000157922 106 ntBASIC3.81□□□□□ -1.8
Upk3aQ9JKX8 V1rd19-201ENSMUST00000173571 1157 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Upk3aQ9JKX8 Vmn2r-ps122-201ENSMUST00000176687 906 ntBASIC3.81□□□□□ -1.8
Upk3aQ9JKX8 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Upk3aQ9JKX8 Gm27427-201ENSMUST00000185134 193 ntBASIC3.81□□□□□ -1.8
Upk3aQ9JKX8 Gm8296-201ENSMUST00000185597 524 ntBASIC3.81□□□□□ -1.8
Upk3aQ9JKX8 Gm5372-201ENSMUST00000187540 409 ntBASIC3.81□□□□□ -1.8
Upk3aQ9JKX8 Gm19214-201ENSMUST00000191956 1083 ntBASIC3.81□□□□□ -1.8
Upk3aQ9JKX8 Mir1892-201ENSMUST00000197752 80 ntBASIC3.81□□□□□ -1.8
Upk3aQ9JKX8 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC3.81□□□□□ -1.8
Upk3aQ9JKX8 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC3.81□□□□□ -1.8
Upk3aQ9JKX8 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC3.81□□□□□ -1.8
Upk3aQ9JKX8 AC106830.1-201ENSMUST00000228032 1003 ntBASIC3.81□□□□□ -1.8
Upk3aQ9JKX8 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
Upk3aQ9JKX8 Gm7099-201ENSMUST00000080066 554 ntBASIC3.81□□□□□ -1.8
Upk3aQ9JKX8 Mir30e-201ENSMUST00000083475 92 ntBASIC3.81□□□□□ -1.8
Upk3aQ9JKX8 Olfr1100-201ENSMUST00000094913 969 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Upk3aQ9JKX8 Eya4-208ENSMUST00000220299 3615 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Upk3aQ9JKX8 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Upk3aQ9JKX8 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Upk3aQ9JKX8 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Upk3aQ9JKX8 Vmn2r-ps100-201ENSMUST00000221238 1702 ntBASIC3.81□□□□□ -1.8
Upk3aQ9JKX8 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
Upk3aQ9JKX8 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Upk3aQ9JKX8 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
Upk3aQ9JKX8 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Upk3aQ9JKX8 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
Upk3aQ9JKX8 Vmn1r-ps102-201ENSMUST00000120663 886 ntBASIC3.8□□□□□ -1.8
Upk3aQ9JKX8 Gm11692-201ENSMUST00000122121 902 ntBASIC3.8□□□□□ -1.8
Upk3aQ9JKX8 Gm11403-201ENSMUST00000122195 369 ntBASIC3.8□□□□□ -1.8
Upk3aQ9JKX8 Platr32-201ENSMUST00000148597 394 ntTSL 5 BASIC3.8□□□□□ -1.8
Upk3aQ9JKX8 Gm23228-201ENSMUST00000157296 270 ntBASIC3.8□□□□□ -1.8
Upk3aQ9JKX8 Gm26148-201ENSMUST00000157430 68 ntBASIC3.8□□□□□ -1.8
Upk3aQ9JKX8 Gm22816-201ENSMUST00000157450 117 ntBASIC3.8□□□□□ -1.8
Upk3aQ9JKX8 Gm26362-201ENSMUST00000158865 315 ntBASIC3.8□□□□□ -1.8
Upk3aQ9JKX8 Sult2a4-202ENSMUST00000165167 964 ntAPPRIS P2 TSL 5 BASIC3.8□□□□□ -1.8
Upk3aQ9JKX8 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Upk3aQ9JKX8 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Upk3aQ9JKX8 9330185C12Rik-201ENSMUST00000180837 1009 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Upk3aQ9JKX8 Mir6238-201ENSMUST00000184140 129 ntBASIC3.8□□□□□ -1.8
Upk3aQ9JKX8 Gm9775-201ENSMUST00000189402 331 ntBASIC3.8□□□□□ -1.8
Upk3aQ9JKX8 Gm29334-201ENSMUST00000190334 357 ntBASIC3.8□□□□□ -1.8
Upk3aQ9JKX8 Gm38234-201ENSMUST00000195204 421 ntBASIC3.8□□□□□ -1.8
Upk3aQ9JKX8 Ociad2-206ENSMUST00000202012 876 ntTSL 5 BASIC3.8□□□□□ -1.8
Upk3aQ9JKX8 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Upk3aQ9JKX8 Gm10988-201ENSMUST00000209150 1088 ntBASIC3.8□□□□□ -1.8
Upk3aQ9JKX8 1700054O05Rik-201ENSMUST00000214107 555 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Upk3aQ9JKX8 Gm32283-201ENSMUST00000218861 549 ntTSL 5 BASIC3.8□□□□□ -1.8
Upk3aQ9JKX8 AC139294.2-201ENSMUST00000227159 285 ntBASIC3.8□□□□□ -1.8
Upk3aQ9JKX8 Olfr209-201ENSMUST00000055868 918 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Upk3aQ9JKX8 Gm26165-201ENSMUST00000083791 138 ntBASIC3.8□□□□□ -1.8
Upk3aQ9JKX8 Olfr1061-201ENSMUST00000099889 942 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Upk3aQ9JKX8 Olfr1000-201ENSMUST00000099921 945 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Upk3aQ9JKX8 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Upk3aQ9JKX8 Gm43751-201ENSMUST00000200275 3071 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms