Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Trim39Q9ESN2 Clec2g-203ENSMUST00000142388 2404 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Trim39Q9ESN2 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Trim39Q9ESN2 Trbv13-2-201ENSMUST00000103270 340 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Trim39Q9ESN2 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Trim39Q9ESN2 Ighv1-26-201ENSMUST00000103510 351 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Trim39Q9ESN2 Ighv1-64-201ENSMUST00000103535 405 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Trim39Q9ESN2 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Trim39Q9ESN2 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Trim39Q9ESN2 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC5.54□□□□□ -1.52
Trim39Q9ESN2 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Trim39Q9ESN2 Gm22714-201ENSMUST00000116894 78 ntBASIC5.54□□□□□ -1.52
Trim39Q9ESN2 Gm12399-201ENSMUST00000121475 446 ntBASIC5.54□□□□□ -1.52
Trim39Q9ESN2 Gm23213-201ENSMUST00000122715 313 ntBASIC5.54□□□□□ -1.52
Trim39Q9ESN2 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Trim39Q9ESN2 Gm24155-201ENSMUST00000175259 110 ntBASIC5.54□□□□□ -1.52
Trim39Q9ESN2 Gm5283-201ENSMUST00000177874 334 ntBASIC5.54□□□□□ -1.52
Trim39Q9ESN2 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Trim39Q9ESN2 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Trim39Q9ESN2 Gm25156-201ENSMUST00000179809 79 ntBASIC5.54□□□□□ -1.52
Trim39Q9ESN2 Gm26180-201ENSMUST00000179942 107 ntBASIC5.54□□□□□ -1.52
Trim39Q9ESN2 Mir6363-201ENSMUST00000184880 114 ntBASIC5.54□□□□□ -1.52
Trim39Q9ESN2 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Trim39Q9ESN2 1700066C05Rik-201ENSMUST00000191029 407 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Trim39Q9ESN2 1700034J04Rik-201ENSMUST00000192736 750 ntBASIC5.54□□□□□ -1.52
Trim39Q9ESN2 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Trim39Q9ESN2 Gm32158-201ENSMUST00000200135 404 ntBASIC5.54□□□□□ -1.52
Trim39Q9ESN2 Gm5110-201ENSMUST00000203122 1063 ntBASIC5.54□□□□□ -1.52
Trim39Q9ESN2 Gm18009-201ENSMUST00000203239 1016 ntBASIC5.54□□□□□ -1.52
Trim39Q9ESN2 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Trim39Q9ESN2 Gm44765-201ENSMUST00000206927 601 ntBASIC5.54□□□□□ -1.52
Trim39Q9ESN2 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC5.54□□□□□ -1.52
Trim39Q9ESN2 AC124420.1-201ENSMUST00000219779 791 ntBASIC5.54□□□□□ -1.52
Trim39Q9ESN2 AC132315.1-201ENSMUST00000221771 390 ntBASIC5.54□□□□□ -1.52
Trim39Q9ESN2 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC5.54□□□□□ -1.52
Trim39Q9ESN2 CT030195.1-201ENSMUST00000223887 378 ntBASIC5.54□□□□□ -1.52
Trim39Q9ESN2 AC154527.1-201ENSMUST00000225809 242 ntBASIC5.54□□□□□ -1.52
Trim39Q9ESN2 AC098719.1-201ENSMUST00000228920 371 ntBASIC5.54□□□□□ -1.52
Trim39Q9ESN2 Olfr486-201ENSMUST00000072035 945 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Trim39Q9ESN2 Havcr2-201ENSMUST00000020668 2721 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Trim39Q9ESN2 Gm37897-201ENSMUST00000192613 3561 ntBASIC5.54□□□□□ -1.52
Trim39Q9ESN2 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Trim39Q9ESN2 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Trim39Q9ESN2 Satl1-201ENSMUST00000026601 2412 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Trim39Q9ESN2 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Trim39Q9ESN2 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
Trim39Q9ESN2 Olfr1262-202ENSMUST00000111508 6068 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
Trim39Q9ESN2 Olfr1265-202ENSMUST00000214855 5701 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Trim39Q9ESN2 Olfr922-202ENSMUST00000213164 4028 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Trim39Q9ESN2 Gm37212-201ENSMUST00000192582 3650 ntBASIC5.53□□□□□ -1.52
Trim39Q9ESN2 Gm38307-201ENSMUST00000195630 1840 ntBASIC5.53□□□□□ -1.52
Trim39Q9ESN2 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Trim39Q9ESN2 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC5.53□□□□□ -1.52
Trim39Q9ESN2 Gm32122-201ENSMUST00000212119 2259 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Trim39Q9ESN2 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Trim39Q9ESN2 Mboat2-204ENSMUST00000221952 6792 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Trim39Q9ESN2 Mtx3-201ENSMUST00000076169 6275 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Trim39Q9ESN2 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Trim39Q9ESN2 Btbd35f21-201ENSMUST00000105017 1943 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Trim39Q9ESN2 Btbd35f27-201ENSMUST00000178143 1943 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Trim39Q9ESN2 Btbd35f16-201ENSMUST00000185755 1949 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Trim39Q9ESN2 Olfr221-205ENSMUST00000216907 2859 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Trim39Q9ESN2 Gm14294-201ENSMUST00000119749 751 ntBASIC5.53□□□□□ -1.52
Trim39Q9ESN2 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC5.53□□□□□ -1.52
Trim39Q9ESN2 Gm11388-201ENSMUST00000120908 159 ntBASIC5.53□□□□□ -1.52
Trim39Q9ESN2 Gm12451-201ENSMUST00000121636 633 ntBASIC5.53□□□□□ -1.52
Trim39Q9ESN2 Gm12438-201ENSMUST00000122034 336 ntBASIC5.53□□□□□ -1.52
Trim39Q9ESN2 Gm16062-201ENSMUST00000151825 771 ntTSL 2 BASIC5.53□□□□□ -1.52
Trim39Q9ESN2 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC5.53□□□□□ -1.52
Trim39Q9ESN2 Gm26353-201ENSMUST00000158224 255 ntBASIC5.53□□□□□ -1.52
Trim39Q9ESN2 Gm22428-201ENSMUST00000158554 132 ntBASIC5.53□□□□□ -1.52
Trim39Q9ESN2 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Trim39Q9ESN2 Gm6541-201ENSMUST00000165542 561 ntBASIC5.53□□□□□ -1.52
Trim39Q9ESN2 Mir5099-201ENSMUST00000175257 74 ntBASIC5.53□□□□□ -1.52
Trim39Q9ESN2 Gm6075-201ENSMUST00000186816 486 ntBASIC5.53□□□□□ -1.52
Trim39Q9ESN2 Scgb2b33-201ENSMUST00000187413 334 ntBASIC5.53□□□□□ -1.52
Trim39Q9ESN2 Gm29111-201ENSMUST00000188823 696 ntBASIC5.53□□□□□ -1.52
Trim39Q9ESN2 Gm28584-201ENSMUST00000191489 696 ntBASIC5.53□□□□□ -1.52
Trim39Q9ESN2 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Trim39Q9ESN2 Gm38138-201ENSMUST00000193274 696 ntBASIC5.53□□□□□ -1.52
Trim39Q9ESN2 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Trim39Q9ESN2 Chaer1-201ENSMUST00000201649 651 ntTSL 5 BASIC5.53□□□□□ -1.52
Trim39Q9ESN2 Gm44083-201ENSMUST00000203114 337 ntBASIC5.53□□□□□ -1.52
Trim39Q9ESN2 Gm43968-201ENSMUST00000203388 389 ntBASIC5.53□□□□□ -1.52
Trim39Q9ESN2 Gm45150-201ENSMUST00000206051 467 ntBASIC5.53□□□□□ -1.52
Trim39Q9ESN2 4833404L02Rik-201ENSMUST00000206290 908 ntBASIC5.53□□□□□ -1.52
Trim39Q9ESN2 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Trim39Q9ESN2 CT030170.4-202ENSMUST00000221109 540 ntBASIC5.53□□□□□ -1.52
Trim39Q9ESN2 AC113031.1-201ENSMUST00000227400 432 ntBASIC5.53□□□□□ -1.52
Trim39Q9ESN2 AC133076.1-201ENSMUST00000228074 484 ntBASIC5.53□□□□□ -1.52
Trim39Q9ESN2 Prss23os-201ENSMUST00000032858 334 ntTSL 2 BASIC5.53□□□□□ -1.52
Trim39Q9ESN2 Rpl21-ps6-201ENSMUST00000074828 468 ntBASIC5.53□□□□□ -1.52
Trim39Q9ESN2 Gm26447-201ENSMUST00000082448 129 ntBASIC5.53□□□□□ -1.52
Trim39Q9ESN2 Gm26228-201ENSMUST00000082512 107 ntBASIC5.53□□□□□ -1.52
Trim39Q9ESN2 Gm25080-201ENSMUST00000082526 107 ntBASIC5.53□□□□□ -1.52
Trim39Q9ESN2 Gm25518-201ENSMUST00000083864 107 ntBASIC5.53□□□□□ -1.52
Trim39Q9ESN2 Gm3512-201ENSMUST00000090663 441 ntTSL 5 BASIC5.53□□□□□ -1.52
Trim39Q9ESN2 Rps19-ps4-201ENSMUST00000091925 438 ntBASIC5.53□□□□□ -1.52
Trim39Q9ESN2 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC5.53□□□□□ -1.52
Trim39Q9ESN2 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 109.7 ms