Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 9130024F11Rik-203ENSMUST00000187858 447 ntTSL 2 BASIC5.24□□□□□ -1.57
Ddx56Q9D0R4 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC5.24□□□□□ -1.57
Ddx56Q9D0R4 Gm36966-201ENSMUST00000192217 413 ntBASIC5.24□□□□□ -1.57
Ddx56Q9D0R4 Igkv3-8-201ENSMUST00000197635 339 ntBASIC5.24□□□□□ -1.57
Ddx56Q9D0R4 Gm43408-201ENSMUST00000198263 440 ntBASIC5.24□□□□□ -1.57
Ddx56Q9D0R4 Gm42990-201ENSMUST00000199231 312 ntBASIC5.24□□□□□ -1.57
Ddx56Q9D0R4 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Ddx56Q9D0R4 Gm44371-201ENSMUST00000204148 467 ntBASIC5.24□□□□□ -1.57
Ddx56Q9D0R4 Gm6261-201ENSMUST00000204707 760 ntBASIC5.24□□□□□ -1.57
Ddx56Q9D0R4 Gm45660-201ENSMUST00000210267 151 ntBASIC5.24□□□□□ -1.57
Ddx56Q9D0R4 AC142273.1-201ENSMUST00000213723 673 ntBASIC5.24□□□□□ -1.57
Ddx56Q9D0R4 AC145736.1-201ENSMUST00000214661 479 ntBASIC5.24□□□□□ -1.57
Ddx56Q9D0R4 AC152946.2-201ENSMUST00000219071 337 ntBASIC5.24□□□□□ -1.57
Ddx56Q9D0R4 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC5.24□□□□□ -1.57
Ddx56Q9D0R4 AC166358.9-201ENSMUST00000220653 375 ntBASIC5.24□□□□□ -1.57
Ddx56Q9D0R4 AC153662.1-201ENSMUST00000222220 270 ntBASIC5.24□□□□□ -1.57
Ddx56Q9D0R4 CT030657.1-201ENSMUST00000222397 378 ntTSL 5 BASIC5.24□□□□□ -1.57
Ddx56Q9D0R4 AC173481.1-201ENSMUST00000223351 270 ntBASIC5.24□□□□□ -1.57
Ddx56Q9D0R4 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC5.24□□□□□ -1.57
Ddx56Q9D0R4 4930469K13Rik-202ENSMUST00000223852 537 ntAPPRIS P5 BASIC5.24□□□□□ -1.57
Ddx56Q9D0R4 AC124729.1-202ENSMUST00000225587 938 ntBASIC5.24□□□□□ -1.57
Ddx56Q9D0R4 AC117656.3-202ENSMUST00000225842 1055 ntBASIC5.24□□□□□ -1.57
Ddx56Q9D0R4 AC167192.1-201ENSMUST00000225908 139 ntBASIC5.24□□□□□ -1.57
Ddx56Q9D0R4 AC114916.1-201ENSMUST00000228465 494 ntBASIC5.24□□□□□ -1.57
Ddx56Q9D0R4 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC5.24□□□□□ -1.57
Ddx56Q9D0R4 Gm22741-201ENSMUST00000083438 165 ntBASIC5.24□□□□□ -1.57
Ddx56Q9D0R4 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Ddx56Q9D0R4 Gm43024-201ENSMUST00000196770 4352 ntBASIC5.24□□□□□ -1.57
Ddx56Q9D0R4 Gm44789-201ENSMUST00000207195 3101 ntBASIC5.24□□□□□ -1.57
Ddx56Q9D0R4 Olfr172-202ENSMUST00000214139 1778 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Ddx56Q9D0R4 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Ddx56Q9D0R4 Ptprd-217ENSMUST00000174023 4530 ntTSL 5 BASIC5.24□□□□□ -1.57
Ddx56Q9D0R4 Olfr726-208ENSMUST00000217422 1302 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Ddx56Q9D0R4 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC5.23□□□□□ -1.57
Ddx56Q9D0R4 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Ddx56Q9D0R4 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Ddx56Q9D0R4 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC5.23□□□□□ -1.57
Ddx56Q9D0R4 Gm46430-206ENSMUST00000222064 1647 ntTSL 3 BASIC5.23□□□□□ -1.57
Ddx56Q9D0R4 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC5.23□□□□□ -1.57
Ddx56Q9D0R4 Btbd35f21-201ENSMUST00000105017 1943 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Ddx56Q9D0R4 Btbd35f27-201ENSMUST00000178143 1943 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Ddx56Q9D0R4 Btbd35f2-201ENSMUST00000179991 1949 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Ddx56Q9D0R4 Gm45129-201ENSMUST00000208444 2224 ntBASIC5.23□□□□□ -1.57
Ddx56Q9D0R4 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Ddx56Q9D0R4 Gm12598-201ENSMUST00000117333 830 ntBASIC5.23□□□□□ -1.57
Ddx56Q9D0R4 Gm8858-201ENSMUST00000118259 342 ntBASIC5.23□□□□□ -1.57
Ddx56Q9D0R4 Gm12423-201ENSMUST00000118334 135 ntBASIC5.23□□□□□ -1.57
Ddx56Q9D0R4 Gm12820-201ENSMUST00000119233 342 ntBASIC5.23□□□□□ -1.57
Ddx56Q9D0R4 Gm11943-201ENSMUST00000119473 327 ntBASIC5.23□□□□□ -1.57
Ddx56Q9D0R4 Gm11790-201ENSMUST00000119569 455 ntBASIC5.23□□□□□ -1.57
Ddx56Q9D0R4 Gm11742-201ENSMUST00000119903 233 ntBASIC5.23□□□□□ -1.57
Ddx56Q9D0R4 Gm5401-201ENSMUST00000122444 365 ntBASIC5.23□□□□□ -1.57
Ddx56Q9D0R4 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC5.23□□□□□ -1.57
Ddx56Q9D0R4 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC5.23□□□□□ -1.57
Ddx56Q9D0R4 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Ddx56Q9D0R4 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Ddx56Q9D0R4 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC5.23□□□□□ -1.57
Ddx56Q9D0R4 Mir7653-201ENSMUST00000184358 61 ntBASIC5.23□□□□□ -1.57
Ddx56Q9D0R4 Gm9443-201ENSMUST00000188406 816 ntBASIC5.23□□□□□ -1.57
Ddx56Q9D0R4 Gm28957-201ENSMUST00000190174 373 ntBASIC5.23□□□□□ -1.57
Ddx56Q9D0R4 Gm45086-201ENSMUST00000209052 462 ntTSL 5 BASIC5.23□□□□□ -1.57
Ddx56Q9D0R4 Gm45439-201ENSMUST00000211723 359 ntBASIC5.23□□□□□ -1.57
Ddx56Q9D0R4 Gm19256-201ENSMUST00000218550 231 ntBASIC5.23□□□□□ -1.57
Ddx56Q9D0R4 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC5.23□□□□□ -1.57
Ddx56Q9D0R4 AC132237.2-201ENSMUST00000221702 1209 ntBASIC5.23□□□□□ -1.57
Ddx56Q9D0R4 Gm46436-201ENSMUST00000221851 1294 ntBASIC5.23□□□□□ -1.57
Ddx56Q9D0R4 Gm272-201ENSMUST00000222073 919 ntBASIC5.23□□□□□ -1.57
Ddx56Q9D0R4 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Ddx56Q9D0R4 Prl3d3-202ENSMUST00000223958 675 ntAPPRIS ALT2 BASIC5.23□□□□□ -1.57
Ddx56Q9D0R4 AC130536.1-201ENSMUST00000224425 271 ntBASIC5.23□□□□□ -1.57
Ddx56Q9D0R4 AC109172.1-201ENSMUST00000227503 187 ntBASIC5.23□□□□□ -1.57
Ddx56Q9D0R4 Gm12582-201ENSMUST00000030555 697 ntBASIC5.23□□□□□ -1.57
Ddx56Q9D0R4 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC5.23□□□□□ -1.57
Ddx56Q9D0R4 Olfr1249-201ENSMUST00000099769 957 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Ddx56Q9D0R4 Cbll1-205ENSMUST00000188326 1399 ntTSL 2 BASIC5.23□□□□□ -1.57
Ddx56Q9D0R4 AC169038.1-201ENSMUST00000227378 1352 ntBASIC5.23□□□□□ -1.57
Ddx56Q9D0R4 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Ddx56Q9D0R4 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Ddx56Q9D0R4 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC5.23□□□□□ -1.57
Ddx56Q9D0R4 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Ddx56Q9D0R4 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Ddx56Q9D0R4 Serpini1-201ENSMUST00000029423 4091 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Ddx56Q9D0R4 Zfp799-201ENSMUST00000179695 5833 ntTSL 3 BASIC5.22□□□□□ -1.57
Ddx56Q9D0R4 CT009696.3-201ENSMUST00000215342 2184 ntTSL 3 BASIC5.22□□□□□ -1.57
Ddx56Q9D0R4 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Ddx56Q9D0R4 Pramef25-201ENSMUST00000105766 1684 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Ddx56Q9D0R4 Gm44567-201ENSMUST00000205645 2631 ntBASIC5.22□□□□□ -1.57
Ddx56Q9D0R4 Gm45872-201ENSMUST00000209804 1584 ntBASIC5.22□□□□□ -1.57
Ddx56Q9D0R4 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Ddx56Q9D0R4 Gm3020-201ENSMUST00000112801 450 ntTSL 5 BASIC5.22□□□□□ -1.57
Ddx56Q9D0R4 Gm11631-201ENSMUST00000119220 156 ntBASIC5.22□□□□□ -1.57
Ddx56Q9D0R4 Gm12704-201ENSMUST00000119789 464 ntBASIC5.22□□□□□ -1.57
Ddx56Q9D0R4 Gm5123-201ENSMUST00000121905 837 ntBASIC5.22□□□□□ -1.57
Ddx56Q9D0R4 Gm22343-201ENSMUST00000122648 286 ntBASIC5.22□□□□□ -1.57
Ddx56Q9D0R4 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC5.22□□□□□ -1.57
Ddx56Q9D0R4 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Ddx56Q9D0R4 Gm5755-201ENSMUST00000152394 837 ntBASIC5.22□□□□□ -1.57
Ddx56Q9D0R4 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Ddx56Q9D0R4 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Ddx56Q9D0R4 Obox3-ps8-201ENSMUST00000177182 960 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 112.8 ms