Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Col6a6Q8C6K9 Gm12082-201ENSMUST00000138164 600 ntTSL 3 BASIC3.26□□□□□ -1.89
Col6a6Q8C6K9 Mir7k-201ENSMUST00000184115 110 ntBASIC3.26□□□□□ -1.89
Col6a6Q8C6K9 Olfr153-201ENSMUST00000217113 1258 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Col6a6Q8C6K9 Vmn1r8-201ENSMUST00000078186 1213 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Col6a6Q8C6K9 Gm22043-201ENSMUST00000082993 158 ntBASIC3.26□□□□□ -1.89
Col6a6Q8C6K9 Olfr895-201ENSMUST00000093864 951 ntBASIC3.26□□□□□ -1.89
Col6a6Q8C6K9 AC154627.2-201ENSMUST00000227028 4669 ntBASIC3.26□□□□□ -1.89
Col6a6Q8C6K9 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC3.26□□□□□ -1.89
Col6a6Q8C6K9 Gm37655-201ENSMUST00000193968 4123 ntBASIC3.25□□□□□ -1.89
Col6a6Q8C6K9 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Col6a6Q8C6K9 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
Col6a6Q8C6K9 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Col6a6Q8C6K9 March1-211ENSMUST00000178982 4012 ntAPPRIS ALT1 TSL 5 BASIC3.25□□□□□ -1.89
Col6a6Q8C6K9 Gm11869-201ENSMUST00000118701 329 ntBASIC3.25□□□□□ -1.89
Col6a6Q8C6K9 Olfr1177-ps-201ENSMUST00000137895 921 ntAPPRIS ALT2 BASIC3.25□□□□□ -1.89
Col6a6Q8C6K9 Gm17155-201ENSMUST00000165969 473 ntBASIC3.25□□□□□ -1.89
Col6a6Q8C6K9 Mir3070b-201ENSMUST00000175205 89 ntBASIC3.25□□□□□ -1.89
Col6a6Q8C6K9 Gm18352-201ENSMUST00000189113 902 ntBASIC3.25□□□□□ -1.89
Col6a6Q8C6K9 Gm43932-201ENSMUST00000204499 52 ntBASIC3.25□□□□□ -1.89
Col6a6Q8C6K9 Gm44200-201ENSMUST00000204883 662 ntTSL 5 BASIC3.25□□□□□ -1.89
Col6a6Q8C6K9 Gm44594-201ENSMUST00000208982 407 ntBASIC3.25□□□□□ -1.89
Col6a6Q8C6K9 AC107864.1-201ENSMUST00000217937 496 ntBASIC3.25□□□□□ -1.89
Col6a6Q8C6K9 AC117237.1-201ENSMUST00000224035 395 ntBASIC3.25□□□□□ -1.89
Col6a6Q8C6K9 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Col6a6Q8C6K9 Satl1-201ENSMUST00000026601 2412 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Col6a6Q8C6K9 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
Col6a6Q8C6K9 Vmn2r104-201ENSMUST00000168050 2583 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Col6a6Q8C6K9 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Col6a6Q8C6K9 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Col6a6Q8C6K9 Vmn1r5-203ENSMUST00000228276 3188 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Col6a6Q8C6K9 Gm3972-201ENSMUST00000173960 2861 ntBASIC3.25□□□□□ -1.89
Col6a6Q8C6K9 Gnpnat1-206ENSMUST00000227468 1490 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Col6a6Q8C6K9 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
Col6a6Q8C6K9 Gm23747-201ENSMUST00000104228 131 ntBASIC3.24□□□□□ -1.89
Col6a6Q8C6K9 Gm24608-201ENSMUST00000104381 136 ntBASIC3.24□□□□□ -1.89
Col6a6Q8C6K9 4933400A11Rik-203ENSMUST00000112102 1101 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Col6a6Q8C6K9 Gm11488-201ENSMUST00000117277 863 ntBASIC3.24□□□□□ -1.89
Col6a6Q8C6K9 Gm11704-201ENSMUST00000120031 214 ntBASIC3.24□□□□□ -1.89
Col6a6Q8C6K9 Gm11234-201ENSMUST00000141030 845 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Col6a6Q8C6K9 Gm37081-201ENSMUST00000192034 196 ntBASIC3.24□□□□□ -1.89
Col6a6Q8C6K9 Gm44084-201ENSMUST00000203947 409 ntBASIC3.24□□□□□ -1.89
Col6a6Q8C6K9 Gm44765-201ENSMUST00000206927 601 ntBASIC3.24□□□□□ -1.89
Col6a6Q8C6K9 Gm44927-201ENSMUST00000207573 716 ntBASIC3.24□□□□□ -1.89
Col6a6Q8C6K9 AV026068-237ENSMUST00000226075 572 ntBASIC3.24□□□□□ -1.89
Col6a6Q8C6K9 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Col6a6Q8C6K9 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Col6a6Q8C6K9 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Col6a6Q8C6K9 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
Col6a6Q8C6K9 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
Col6a6Q8C6K9 Gm2309-201ENSMUST00000149994 1941 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Col6a6Q8C6K9 Cldn34d-201ENSMUST00000114054 1003 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Col6a6Q8C6K9 Gm9119-201ENSMUST00000118866 495 ntBASIC3.24□□□□□ -1.89
Col6a6Q8C6K9 Gm16303-201ENSMUST00000161498 390 ntBASIC3.24□□□□□ -1.89
Col6a6Q8C6K9 Speer4cos-201ENSMUST00000162113 1083 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Col6a6Q8C6K9 Gm37560-201ENSMUST00000194289 1000 ntBASIC3.24□□□□□ -1.89
Col6a6Q8C6K9 Gm44475-201ENSMUST00000204041 424 ntBASIC3.24□□□□□ -1.89
Col6a6Q8C6K9 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC3.24□□□□□ -1.89
Col6a6Q8C6K9 Gm35625-202ENSMUST00000211040 266 ntTSL 3 BASIC3.24□□□□□ -1.89
Col6a6Q8C6K9 AC153948.1-201ENSMUST00000219080 3838 ntBASIC3.24□□□□□ -1.89
Col6a6Q8C6K9 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Col6a6Q8C6K9 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Col6a6Q8C6K9 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC3.24□□□□□ -1.89
Col6a6Q8C6K9 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Col6a6Q8C6K9 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Col6a6Q8C6K9 Olfr1176-202ENSMUST00000213778 2823 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Col6a6Q8C6K9 Gm45322-201ENSMUST00000211642 1361 ntBASIC3.24□□□□□ -1.89
Col6a6Q8C6K9 Zfp799-201ENSMUST00000179695 5833 ntTSL 3 BASIC3.24□□□□□ -1.89
Col6a6Q8C6K9 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Col6a6Q8C6K9 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Col6a6Q8C6K9 2900018N21Rik-201ENSMUST00000195805 1580 ntBASIC3.23□□□□□ -1.89
Col6a6Q8C6K9 Gm43313-201ENSMUST00000201398 2235 ntBASIC3.23□□□□□ -1.89
Col6a6Q8C6K9 Gm25308-201ENSMUST00000104171 158 ntBASIC3.23□□□□□ -1.89
Col6a6Q8C6K9 Gm6893-201ENSMUST00000118385 522 ntBASIC3.23□□□□□ -1.89
Col6a6Q8C6K9 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC3.23□□□□□ -1.89
Col6a6Q8C6K9 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC3.23□□□□□ -1.89
Col6a6Q8C6K9 1700074A21Rik-201ENSMUST00000192404 346 ntBASIC3.23□□□□□ -1.89
Col6a6Q8C6K9 Gm5551-201ENSMUST00000199720 690 ntBASIC3.23□□□□□ -1.89
Col6a6Q8C6K9 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Col6a6Q8C6K9 Gm8681-201ENSMUST00000219115 618 ntBASIC3.23□□□□□ -1.89
Col6a6Q8C6K9 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Col6a6Q8C6K9 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Col6a6Q8C6K9 Gm10356-201ENSMUST00000097152 1258 ntBASIC3.23□□□□□ -1.89
Col6a6Q8C6K9 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Col6a6Q8C6K9 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Col6a6Q8C6K9 Olfr1487-205ENSMUST00000217061 4080 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Col6a6Q8C6K9 Kcnt2-201ENSMUST00000119786 3624 ntTSL 5 BASIC3.23□□□□□ -1.89
Col6a6Q8C6K9 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Col6a6Q8C6K9 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Col6a6Q8C6K9 Olfr828-202ENSMUST00000215380 1689 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
Col6a6Q8C6K9 Kcnt2-203ENSMUST00000120796 3540 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Col6a6Q8C6K9 Gm6545-201ENSMUST00000217186 1786 ntBASIC3.23□□□□□ -1.89
Col6a6Q8C6K9 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC3.23□□□□□ -1.89
Col6a6Q8C6K9 Olfr723-201ENSMUST00000164157 1006 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Col6a6Q8C6K9 Gm20389-201ENSMUST00000174217 1006 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Col6a6Q8C6K9 Gm28660-201ENSMUST00000186496 253 ntBASIC3.23□□□□□ -1.89
Col6a6Q8C6K9 Gm43155-201ENSMUST00000202661 494 ntBASIC3.23□□□□□ -1.89
Col6a6Q8C6K9 Gm20177-201ENSMUST00000203705 334 ntBASIC3.23□□□□□ -1.89
Col6a6Q8C6K9 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC3.23□□□□□ -1.89
Col6a6Q8C6K9 Vdac3-ps1-201ENSMUST00000099736 853 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 99.7 ms