Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm4263-201ENSMUST00000220693 1101 ntBASIC7.35□□□□□ -1.23
Trim35Q8C006 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Trim35Q8C006 AC124595.1-201ENSMUST00000221799 646 ntTSL 3 BASIC7.35□□□□□ -1.23
Trim35Q8C006 AC165155.1-201ENSMUST00000228932 445 ntBASIC7.35□□□□□ -1.23
Trim35Q8C006 Gm24613-201ENSMUST00000083266 130 ntBASIC7.35□□□□□ -1.23
Trim35Q8C006 Hba-a2-201ENSMUST00000093207 554 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Trim35Q8C006 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Trim35Q8C006 Gm44440-201ENSMUST00000203139 2373 ntBASIC7.35□□□□□ -1.23
Trim35Q8C006 Phc3-204ENSMUST00000108255 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Trim35Q8C006 Gm31410-201ENSMUST00000217302 4048 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Trim35Q8C006 Tdrkh-204ENSMUST00000196606 2586 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
Trim35Q8C006 Zfp655-205ENSMUST00000199322 4157 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Trim35Q8C006 Vmn1r90-201ENSMUST00000185220 7144 ntAPPRIS P2 BASIC7.35□□□□□ -1.23
Trim35Q8C006 Gm38085-201ENSMUST00000195785 3062 ntBASIC7.35□□□□□ -1.23
Trim35Q8C006 Gm42898-201ENSMUST00000200370 3073 ntBASIC7.35□□□□□ -1.23
Trim35Q8C006 Kat6a-202ENSMUST00000110696 9041 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Trim35Q8C006 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Trim35Q8C006 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Trim35Q8C006 Slc38a6-208ENSMUST00000153941 3927 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Trim35Q8C006 Arhgap1-201ENSMUST00000090614 2866 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Trim35Q8C006 Olfr90-203ENSMUST00000215195 3060 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Trim35Q8C006 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Trim35Q8C006 Vmn1r34-206ENSMUST00000228498 3078 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Trim35Q8C006 Gm17203-201ENSMUST00000164379 4017 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Trim35Q8C006 St18-204ENSMUST00000131494 5720 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Trim35Q8C006 Magea10-201ENSMUST00000088481 1821 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Trim35Q8C006 Olfr845-202ENSMUST00000213344 3530 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Trim35Q8C006 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Trim35Q8C006 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
Trim35Q8C006 Slc4a4-201ENSMUST00000113216 2518 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Trim35Q8C006 Gm7562-201ENSMUST00000210502 2537 ntBASIC7.34□□□□□ -1.23
Trim35Q8C006 Olfr1045-202ENSMUST00000215763 2960 ntAPPRIS P1 TSL 3 BASIC7.34□□□□□ -1.23
Trim35Q8C006 Gm42630-201ENSMUST00000195908 3448 ntBASIC7.34□□□□□ -1.23
Trim35Q8C006 Slc6a20a-203ENSMUST00000171647 3894 ntTSL 5 BASIC7.34□□□□□ -1.23
Trim35Q8C006 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC7.34□□□□□ -1.23
Trim35Q8C006 Fbxw21-203ENSMUST00000198076 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Trim35Q8C006 AC122426.2-201ENSMUST00000216522 2947 ntBASIC7.34□□□□□ -1.23
Trim35Q8C006 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Trim35Q8C006 1700092K14Rik-201ENSMUST00000106604 395 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Trim35Q8C006 Gm11474-201ENSMUST00000120814 277 ntBASIC7.34□□□□□ -1.23
Trim35Q8C006 Gm6762-201ENSMUST00000121769 289 ntBASIC7.34□□□□□ -1.23
Trim35Q8C006 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC7.34□□□□□ -1.23
Trim35Q8C006 Gm14547-201ENSMUST00000138341 371 ntTSL 5 BASIC7.34□□□□□ -1.23
Trim35Q8C006 Plxna4os3-202ENSMUST00000143328 277 ntTSL 3 BASIC7.34□□□□□ -1.23
Trim35Q8C006 Gm23392-201ENSMUST00000157580 113 ntBASIC7.34□□□□□ -1.23
Trim35Q8C006 Gm24946-201ENSMUST00000158332 106 ntBASIC7.34□□□□□ -1.23
Trim35Q8C006 Gm7241-201ENSMUST00000159853 357 ntBASIC7.34□□□□□ -1.23
Trim35Q8C006 Gm7502-201ENSMUST00000169235 733 ntBASIC7.34□□□□□ -1.23
Trim35Q8C006 Gm29031-201ENSMUST00000185316 614 ntBASIC7.34□□□□□ -1.23
Trim35Q8C006 Gm29000-201ENSMUST00000185444 614 ntBASIC7.34□□□□□ -1.23
Trim35Q8C006 Gm28204-201ENSMUST00000185934 614 ntBASIC7.34□□□□□ -1.23
Trim35Q8C006 Gm28290-201ENSMUST00000186505 614 ntBASIC7.34□□□□□ -1.23
Trim35Q8C006 Gm28161-201ENSMUST00000186669 614 ntBASIC7.34□□□□□ -1.23
Trim35Q8C006 Gm28749-209ENSMUST00000189599 614 ntBASIC7.34□□□□□ -1.23
Trim35Q8C006 Gm18698-201ENSMUST00000192327 668 ntBASIC7.34□□□□□ -1.23
Trim35Q8C006 Gm38015-201ENSMUST00000193048 188 ntBASIC7.34□□□□□ -1.23
Trim35Q8C006 Gm37556-201ENSMUST00000193877 468 ntTSL 5 BASIC7.34□□□□□ -1.23
Trim35Q8C006 Gm33163-201ENSMUST00000194504 614 ntBASIC7.34□□□□□ -1.23
Trim35Q8C006 Gm45445-201ENSMUST00000209586 232 ntBASIC7.34□□□□□ -1.23
Trim35Q8C006 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Trim35Q8C006 CT010480.3-201ENSMUST00000224712 259 ntBASIC7.34□□□□□ -1.23
Trim35Q8C006 AC165287.1-201ENSMUST00000224985 178 ntBASIC7.34□□□□□ -1.23
Trim35Q8C006 Macrod2os2-201ENSMUST00000143227 3566 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Trim35Q8C006 Ttll4-202ENSMUST00000113678 3762 ntTSL 5 BASIC7.34□□□□□ -1.23
Trim35Q8C006 Gm42482-201ENSMUST00000198904 1947 ntBASIC7.34□□□□□ -1.23
Trim35Q8C006 Gm8995-202ENSMUST00000208417 3490 ntBASIC7.34□□□□□ -1.23
Trim35Q8C006 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Trim35Q8C006 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC7.34□□□□□ -1.23
Trim35Q8C006 Mtfr1-202ENSMUST00000117529 1896 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Trim35Q8C006 Fbxw7-203ENSMUST00000107678 4073 ntAPPRIS ALT1 TSL 5 BASIC7.34□□□□□ -1.23
Trim35Q8C006 Dnah10-203ENSMUST00000141137 13862 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
Trim35Q8C006 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
Trim35Q8C006 1110008L16Rik-201ENSMUST00000021411 3122 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.24
Trim35Q8C006 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Trim35Q8C006 Gm37730-201ENSMUST00000192432 2211 ntBASIC7.33□□□□□ -1.24
Trim35Q8C006 Pard3-203ENSMUST00000108752 3497 ntTSL 5 BASIC7.33□□□□□ -1.24
Trim35Q8C006 Errfi1-202ENSMUST00000073600 3036 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Trim35Q8C006 Gm37639-201ENSMUST00000191623 2785 ntBASIC7.33□□□□□ -1.24
Trim35Q8C006 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Trim35Q8C006 Vmn1r196-205ENSMUST00000228557 5790 ntAPPRIS P2 BASIC7.33□□□□□ -1.24
Trim35Q8C006 Gm37941-201ENSMUST00000192170 2309 ntBASIC7.33□□□□□ -1.24
Trim35Q8C006 Vmn1r40-203ENSMUST00000227669 2540 ntBASIC7.33□□□□□ -1.24
Trim35Q8C006 1700019J19Rik-202ENSMUST00000213583 1856 ntTSL 5 BASIC7.33□□□□□ -1.24
Trim35Q8C006 Crtam-204ENSMUST00000188848 5001 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
Trim35Q8C006 Rfwd3-201ENSMUST00000038739 4443 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Trim35Q8C006 Gm26076-201ENSMUST00000104065 105 ntBASIC7.33□□□□□ -1.24
Trim35Q8C006 Gm6181-201ENSMUST00000117187 264 ntBASIC7.33□□□□□ -1.24
Trim35Q8C006 Gm14694-201ENSMUST00000121856 282 ntBASIC7.33□□□□□ -1.24
Trim35Q8C006 Gm23211-201ENSMUST00000122717 308 ntBASIC7.33□□□□□ -1.24
Trim35Q8C006 Gm25980-201ENSMUST00000157176 218 ntBASIC7.33□□□□□ -1.24
Trim35Q8C006 Gm22206-201ENSMUST00000158612 116 ntBASIC7.33□□□□□ -1.24
Trim35Q8C006 Gm16490-201ENSMUST00000165299 351 ntBASIC7.33□□□□□ -1.24
Trim35Q8C006 Gm22132-201ENSMUST00000175316 100 ntBASIC7.33□□□□□ -1.24
Trim35Q8C006 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC7.33□□□□□ -1.24
Trim35Q8C006 Mir6409-201ENSMUST00000184957 92 ntBASIC7.33□□□□□ -1.24
Trim35Q8C006 Gm21181-201ENSMUST00000186249 330 ntBASIC7.33□□□□□ -1.24
Trim35Q8C006 Gm44182-201ENSMUST00000204052 115 ntBASIC7.33□□□□□ -1.24
Trim35Q8C006 Gm44836-201ENSMUST00000205869 336 ntTSL 5 BASIC7.33□□□□□ -1.24
Trim35Q8C006 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC7.33□□□□□ -1.24
Trim35Q8C006 AC238940.2-201ENSMUST00000224202 330 ntBASIC7.33□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms