Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Gm11894-201ENSMUST00000121579 328 ntBASIC6.1□□□□□ -1.43
Trim56Q80VI1 Gm12340-201ENSMUST00000121617 462 ntBASIC6.1□□□□□ -1.43
Trim56Q80VI1 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC6.1□□□□□ -1.43
Trim56Q80VI1 Gm23837-201ENSMUST00000122656 286 ntBASIC6.1□□□□□ -1.43
Trim56Q80VI1 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC6.1□□□□□ -1.43
Trim56Q80VI1 1700123O12Rik-204ENSMUST00000146783 577 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trim56Q80VI1 Gm23700-201ENSMUST00000158842 102 ntBASIC6.1□□□□□ -1.43
Trim56Q80VI1 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Trim56Q80VI1 Lgals1-ps1-201ENSMUST00000173500 368 ntBASIC6.1□□□□□ -1.43
Trim56Q80VI1 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC6.1□□□□□ -1.43
Trim56Q80VI1 Mrgprc4-ps-201ENSMUST00000186018 964 ntBASIC6.1□□□□□ -1.43
Trim56Q80VI1 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trim56Q80VI1 1700113H08Rik-203ENSMUST00000189775 798 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trim56Q80VI1 Gm43624-201ENSMUST00000197368 180 ntBASIC6.1□□□□□ -1.43
Trim56Q80VI1 Arl2bp-203ENSMUST00000211858 318 ntTSL 5 BASIC6.1□□□□□ -1.43
Trim56Q80VI1 Gm45727-201ENSMUST00000212886 572 ntBASIC6.1□□□□□ -1.43
Trim56Q80VI1 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trim56Q80VI1 9430078K24Rik-202ENSMUST00000219857 348 ntTSL 3 BASIC6.1□□□□□ -1.43
Trim56Q80VI1 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC6.1□□□□□ -1.43
Trim56Q80VI1 BC048502-201ENSMUST00000065978 718 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Trim56Q80VI1 Gm25260-201ENSMUST00000083053 134 ntBASIC6.1□□□□□ -1.43
Trim56Q80VI1 Gm24928-201ENSMUST00000083399 107 ntBASIC6.1□□□□□ -1.43
Trim56Q80VI1 Gm25897-201ENSMUST00000083709 107 ntBASIC6.1□□□□□ -1.43
Trim56Q80VI1 Mir199a-2-201ENSMUST00000093618 110 ntBASIC6.1□□□□□ -1.43
Trim56Q80VI1 Olfr586-203ENSMUST00000213281 5001 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Trim56Q80VI1 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Trim56Q80VI1 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Trim56Q80VI1 Gm8267-201ENSMUST00000165003 1751 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Trim56Q80VI1 1700049E17Rik1-201ENSMUST00000095985 1761 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
Trim56Q80VI1 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Trim56Q80VI1 Spag5-201ENSMUST00000045026 3887 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Trim56Q80VI1 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Trim56Q80VI1 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
Trim56Q80VI1 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC6.1□□□□□ -1.43
Trim56Q80VI1 Fat2-201ENSMUST00000068853 14528 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Trim56Q80VI1 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
Trim56Q80VI1 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Trim56Q80VI1 F630028O10Rik-201ENSMUST00000133125 2771 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Trim56Q80VI1 Gm38278-201ENSMUST00000194715 1365 ntBASIC6.09□□□□□ -1.43
Trim56Q80VI1 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
Trim56Q80VI1 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Trim56Q80VI1 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC6.09□□□□□ -1.43
Trim56Q80VI1 Olfr1310-202ENSMUST00000213559 4897 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Trim56Q80VI1 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Trim56Q80VI1 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Trim56Q80VI1 AC162910.1-201ENSMUST00000221219 1723 ntBASIC6.09□□□□□ -1.43
Trim56Q80VI1 Gm12789-202ENSMUST00000106915 495 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
Trim56Q80VI1 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Trim56Q80VI1 Gm15357-201ENSMUST00000119160 285 ntBASIC6.09□□□□□ -1.43
Trim56Q80VI1 Gm14678-201ENSMUST00000121396 482 ntBASIC6.09□□□□□ -1.43
Trim56Q80VI1 n-R5s21-201ENSMUST00000122692 117 ntBASIC6.09□□□□□ -1.43
Trim56Q80VI1 Gm13838-201ENSMUST00000132130 531 ntTSL 5 BASIC6.09□□□□□ -1.43
Trim56Q80VI1 Gm7855-201ENSMUST00000137737 687 ntBASIC6.09□□□□□ -1.43
Trim56Q80VI1 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC6.09□□□□□ -1.43
Trim56Q80VI1 Gm24477-201ENSMUST00000157438 103 ntBASIC6.09□□□□□ -1.43
Trim56Q80VI1 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Trim56Q80VI1 Gm3084-201ENSMUST00000169967 598 ntBASIC6.09□□□□□ -1.43
Trim56Q80VI1 Gm26318-201ENSMUST00000176507 96 ntBASIC6.09□□□□□ -1.43
Trim56Q80VI1 Gm24418-201ENSMUST00000177597 79 ntBASIC6.09□□□□□ -1.43
Trim56Q80VI1 Tex50-202ENSMUST00000178511 954 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
Trim56Q80VI1 Gm24639-201ENSMUST00000178518 79 ntBASIC6.09□□□□□ -1.43
Trim56Q80VI1 Gm23076-201ENSMUST00000179082 79 ntBASIC6.09□□□□□ -1.43
Trim56Q80VI1 Gm25077-201ENSMUST00000179157 79 ntBASIC6.09□□□□□ -1.43
Trim56Q80VI1 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC6.09□□□□□ -1.43
Trim56Q80VI1 Rian-214ENSMUST00000183026 596 ntTSL 5 BASIC6.09□□□□□ -1.43
Trim56Q80VI1 Trbv8-201ENSMUST00000194020 285 ntBASIC6.09□□□□□ -1.43
Trim56Q80VI1 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Trim56Q80VI1 Gm43408-201ENSMUST00000198263 440 ntBASIC6.09□□□□□ -1.43
Trim56Q80VI1 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC6.09□□□□□ -1.43
Trim56Q80VI1 Gm3690-201ENSMUST00000211341 262 ntBASIC6.09□□□□□ -1.43
Trim56Q80VI1 Gm45742-201ENSMUST00000212400 433 ntBASIC6.09□□□□□ -1.43
Trim56Q80VI1 AC091522.1-201ENSMUST00000213934 850 ntTSL 5 BASIC6.09□□□□□ -1.43
Trim56Q80VI1 Gm20304-201ENSMUST00000218168 444 ntBASIC6.09□□□□□ -1.43
Trim56Q80VI1 Vmn2r-ps92-201ENSMUST00000220242 388 ntBASIC6.09□□□□□ -1.43
Trim56Q80VI1 AC154755.1-201ENSMUST00000225244 537 ntBASIC6.09□□□□□ -1.43
Trim56Q80VI1 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC6.09□□□□□ -1.43
Trim56Q80VI1 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Trim56Q80VI1 Gm7676-201ENSMUST00000084055 319 ntBASIC6.09□□□□□ -1.43
Trim56Q80VI1 Vmn2r28-201ENSMUST00000086297 3785 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Trim56Q80VI1 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Trim56Q80VI1 Olfr447-202ENSMUST00000216408 3185 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Trim56Q80VI1 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Trim56Q80VI1 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
Trim56Q80VI1 4921515E04Rik-203ENSMUST00000227364 2309 ntBASIC6.09□□□□□ -1.43
Trim56Q80VI1 Olfr1286-203ENSMUST00000213210 3740 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
Trim56Q80VI1 4930525G20Rik-201ENSMUST00000181912 2987 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
Trim56Q80VI1 Gm14552-201ENSMUST00000126906 2098 ntTSL 5 BASIC6.08□□□□□ -1.44
Trim56Q80VI1 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Trim56Q80VI1 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Trim56Q80VI1 Gm37903-201ENSMUST00000192122 2381 ntBASIC6.08□□□□□ -1.44
Trim56Q80VI1 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Trim56Q80VI1 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Trim56Q80VI1 Olfr2-205ENSMUST00000214105 5798 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Trim56Q80VI1 Vmn1r120-201ENSMUST00000105202 918 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Trim56Q80VI1 Hbb-bh2-201ENSMUST00000106866 558 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Trim56Q80VI1 Gm15399-201ENSMUST00000118055 724 ntBASIC6.08□□□□□ -1.44
Trim56Q80VI1 Gm24385-201ENSMUST00000122694 350 ntBASIC6.08□□□□□ -1.44
Trim56Q80VI1 Gm12909-201ENSMUST00000134190 620 ntTSL 2 BASIC6.08□□□□□ -1.44
Trim56Q80VI1 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC6.08□□□□□ -1.44
Trim56Q80VI1 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC6.08□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms