Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Ubfd1Q78JW9 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
Ubfd1Q78JW9 Gm25278-201ENSMUST00000157267 120 ntBASIC4.67□□□□□ -1.66
Ubfd1Q78JW9 Gm26271-201ENSMUST00000158349 104 ntBASIC4.67□□□□□ -1.66
Ubfd1Q78JW9 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC4.67□□□□□ -1.66
Ubfd1Q78JW9 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Ubfd1Q78JW9 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
Ubfd1Q78JW9 Gm28389-201ENSMUST00000190090 697 ntBASIC4.67□□□□□ -1.66
Ubfd1Q78JW9 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC4.67□□□□□ -1.66
Ubfd1Q78JW9 Olfr416-ps1-201ENSMUST00000192734 804 ntBASIC4.67□□□□□ -1.66
Ubfd1Q78JW9 Gm38234-201ENSMUST00000195204 421 ntBASIC4.67□□□□□ -1.66
Ubfd1Q78JW9 Gm8458-201ENSMUST00000196658 819 ntBASIC4.67□□□□□ -1.66
Ubfd1Q78JW9 Gm42720-201ENSMUST00000196813 300 ntBASIC4.67□□□□□ -1.66
Ubfd1Q78JW9 Gm18011-201ENSMUST00000203717 565 ntBASIC4.67□□□□□ -1.66
Ubfd1Q78JW9 Gm44757-201ENSMUST00000206373 157 ntBASIC4.67□□□□□ -1.66
Ubfd1Q78JW9 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Ubfd1Q78JW9 Gm33091-201ENSMUST00000217798 748 ntTSL 3 BASIC4.67□□□□□ -1.66
Ubfd1Q78JW9 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC4.67□□□□□ -1.66
Ubfd1Q78JW9 Aoah-202ENSMUST00000221982 919 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Ubfd1Q78JW9 Pglyrp3-201ENSMUST00000047660 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Ubfd1Q78JW9 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC4.67□□□□□ -1.66
Ubfd1Q78JW9 Gm23300-201ENSMUST00000082712 125 ntBASIC4.67□□□□□ -1.66
Ubfd1Q78JW9 Snora52-201ENSMUST00000082732 137 ntBASIC4.67□□□□□ -1.66
Ubfd1Q78JW9 Gm23677-201ENSMUST00000083156 104 ntBASIC4.67□□□□□ -1.66
Ubfd1Q78JW9 Gm23455-201ENSMUST00000083331 100 ntBASIC4.67□□□□□ -1.66
Ubfd1Q78JW9 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Ubfd1Q78JW9 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Ubfd1Q78JW9 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Ubfd1Q78JW9 2610044O15Rik8-205ENSMUST00000190157 1776 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Ubfd1Q78JW9 AC139754.3-201ENSMUST00000220444 1627 ntBASIC4.67□□□□□ -1.66
Ubfd1Q78JW9 Olfr1440-205ENSMUST00000216145 7542 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Ubfd1Q78JW9 Gm38065-201ENSMUST00000193147 3492 ntBASIC4.67□□□□□ -1.66
Ubfd1Q78JW9 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
Ubfd1Q78JW9 Akr1c14-202ENSMUST00000118717 3183 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Ubfd1Q78JW9 Cyld-204ENSMUST00000209206 4032 ntTSL 5 BASIC4.67□□□□□ -1.66
Ubfd1Q78JW9 Olfr1300-ps1-201ENSMUST00000208175 2235 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Ubfd1Q78JW9 C130073E24Rik-202ENSMUST00000211313 14112 ntTSL 5 BASIC4.66□□□□□ -1.66
Ubfd1Q78JW9 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Ubfd1Q78JW9 Rgsl1-201ENSMUST00000124558 3642 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Ubfd1Q78JW9 E430024I08Rik-208ENSMUST00000223312 1573 ntTSL 5 BASIC4.66□□□□□ -1.66
Ubfd1Q78JW9 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Ubfd1Q78JW9 Gm15518-201ENSMUST00000127115 2108 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Ubfd1Q78JW9 Kcnrg-201ENSMUST00000051184 1766 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Ubfd1Q78JW9 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
Ubfd1Q78JW9 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Ubfd1Q78JW9 Olfr947-ps1-201ENSMUST00000214075 2165 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
Ubfd1Q78JW9 Gm14575-201ENSMUST00000117210 560 ntBASIC4.66□□□□□ -1.66
Ubfd1Q78JW9 Gm11313-201ENSMUST00000118779 432 ntBASIC4.66□□□□□ -1.66
Ubfd1Q78JW9 Gm12067-201ENSMUST00000119755 1148 ntBASIC4.66□□□□□ -1.66
Ubfd1Q78JW9 Gm4912-201ENSMUST00000122212 1044 ntBASIC4.66□□□□□ -1.66
Ubfd1Q78JW9 8030443G20Rik-201ENSMUST00000140919 903 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Ubfd1Q78JW9 Gm14651-201ENSMUST00000147192 442 ntBASIC4.66□□□□□ -1.66
Ubfd1Q78JW9 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC4.66□□□□□ -1.66
Ubfd1Q78JW9 Gm14637-201ENSMUST00000156516 444 ntTSL 2 BASIC4.66□□□□□ -1.66
Ubfd1Q78JW9 Gm26393-201ENSMUST00000157625 129 ntBASIC4.66□□□□□ -1.66
Ubfd1Q78JW9 Gm23318-201ENSMUST00000158000 108 ntBASIC4.66□□□□□ -1.66
Ubfd1Q78JW9 Gm25923-201ENSMUST00000158312 138 ntBASIC4.66□□□□□ -1.66
Ubfd1Q78JW9 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
Ubfd1Q78JW9 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC4.66□□□□□ -1.66
Ubfd1Q78JW9 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC4.66□□□□□ -1.66
Ubfd1Q78JW9 Mir7031-201ENSMUST00000183860 65 ntBASIC4.66□□□□□ -1.66
Ubfd1Q78JW9 Gm8676-201ENSMUST00000184206 637 ntBASIC4.66□□□□□ -1.66
Ubfd1Q78JW9 Gm18448-201ENSMUST00000186286 599 ntBASIC4.66□□□□□ -1.66
Ubfd1Q78JW9 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Ubfd1Q78JW9 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC4.66□□□□□ -1.66
Ubfd1Q78JW9 Gm37123-201ENSMUST00000192994 1171 ntBASIC4.66□□□□□ -1.66
Ubfd1Q78JW9 4930520M14Rik-201ENSMUST00000196947 701 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Ubfd1Q78JW9 E330037G11Rik-201ENSMUST00000204295 1086 ntBASIC4.66□□□□□ -1.66
Ubfd1Q78JW9 Gm32536-201ENSMUST00000205209 445 ntBASIC4.66□□□□□ -1.66
Ubfd1Q78JW9 Gm45651-201ENSMUST00000210857 335 ntBASIC4.66□□□□□ -1.66
Ubfd1Q78JW9 AC134528.1-201ENSMUST00000219156 387 ntTSL 2 BASIC4.66□□□□□ -1.66
Ubfd1Q78JW9 Olfr617-201ENSMUST00000048265 957 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Ubfd1Q78JW9 Gm24031-201ENSMUST00000083930 131 ntBASIC4.66□□□□□ -1.66
Ubfd1Q78JW9 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
Ubfd1Q78JW9 Olfr1208-201ENSMUST00000099810 1075 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Ubfd1Q78JW9 Gm28074-201ENSMUST00000190424 1497 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Ubfd1Q78JW9 Gm43665-201ENSMUST00000198672 1659 ntBASIC4.66□□□□□ -1.66
Ubfd1Q78JW9 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Ubfd1Q78JW9 Gm11251-201ENSMUST00000119593 2800 ntBASIC4.66□□□□□ -1.66
Ubfd1Q78JW9 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC4.66□□□□□ -1.66
Ubfd1Q78JW9 Pbrm1-201ENSMUST00000022471 5871 ntTSL 5 BASIC4.66□□□□□ -1.66
Ubfd1Q78JW9 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Ubfd1Q78JW9 Spp1-204ENSMUST00000112747 1507 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
Ubfd1Q78JW9 Gm20667-201ENSMUST00000175674 1930 ntBASIC4.66□□□□□ -1.66
Ubfd1Q78JW9 Olfr726-206ENSMUST00000217025 1363 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Ubfd1Q78JW9 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC4.65□□□□□ -1.66
Ubfd1Q78JW9 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Ubfd1Q78JW9 F9-201ENSMUST00000033477 2734 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Ubfd1Q78JW9 4932438A13Rik-217ENSMUST00000152564 15541 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Ubfd1Q78JW9 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Ubfd1Q78JW9 Gm26002-201ENSMUST00000101915 107 ntBASIC4.65□□□□□ -1.67
Ubfd1Q78JW9 Gm22091-201ENSMUST00000116908 127 ntBASIC4.65□□□□□ -1.67
Ubfd1Q78JW9 Gm14909-201ENSMUST00000117853 351 ntBASIC4.65□□□□□ -1.67
Ubfd1Q78JW9 Gm12102-201ENSMUST00000118251 604 ntBASIC4.65□□□□□ -1.67
Ubfd1Q78JW9 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC4.65□□□□□ -1.67
Ubfd1Q78JW9 Gm5942-201ENSMUST00000120046 439 ntBASIC4.65□□□□□ -1.67
Ubfd1Q78JW9 Gm16445-201ENSMUST00000120399 714 ntBASIC4.65□□□□□ -1.67
Ubfd1Q78JW9 Gm5646-201ENSMUST00000120568 714 ntBASIC4.65□□□□□ -1.67
Ubfd1Q78JW9 Gm12711-201ENSMUST00000131249 340 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Ubfd1Q78JW9 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC4.65□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms