Protein–RNA interactions for Protein: Q6PAV2

Herc4, Probable E3 ubiquitin-protein ligase HERC4, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4Q6PAV2 Gm28191-201ENSMUST00000189112 211 ntBASIC4.42□□□□□ -1.7
Herc4Q6PAV2 Gm30280-201ENSMUST00000192214 262 ntBASIC4.42□□□□□ -1.7
Herc4Q6PAV2 Gm18547-201ENSMUST00000192439 811 ntBASIC4.42□□□□□ -1.7
Herc4Q6PAV2 Gm8790-201ENSMUST00000194108 322 ntBASIC4.42□□□□□ -1.7
Herc4Q6PAV2 Gm38374-201ENSMUST00000194417 2033 ntBASIC4.42□□□□□ -1.7
Herc4Q6PAV2 Gm19030-201ENSMUST00000194947 552 ntBASIC4.42□□□□□ -1.7
Herc4Q6PAV2 Gm43853-201ENSMUST00000197162 301 ntBASIC4.42□□□□□ -1.7
Herc4Q6PAV2 Gm42593-201ENSMUST00000198469 377 ntBASIC4.42□□□□□ -1.7
Herc4Q6PAV2 Clec2f-202ENSMUST00000204981 657 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Herc4Q6PAV2 Znrd1as-204ENSMUST00000209623 1218 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
Herc4Q6PAV2 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
Herc4Q6PAV2 AC152981.1-201ENSMUST00000218320 2480 ntBASIC4.42□□□□□ -1.7
Herc4Q6PAV2 Gm31931-201ENSMUST00000219666 222 ntBASIC4.42□□□□□ -1.7
Herc4Q6PAV2 Gm4263-202ENSMUST00000221392 667 ntBASIC4.42□□□□□ -1.7
Herc4Q6PAV2 AC158523.1-201ENSMUST00000221398 328 ntBASIC4.42□□□□□ -1.7
Herc4Q6PAV2 1700011B04Rik-211ENSMUST00000222690 394 ntTSL 5 BASIC4.42□□□□□ -1.7
Herc4Q6PAV2 AC133517.1-202ENSMUST00000224409 233 ntBASIC4.42□□□□□ -1.7
Herc4Q6PAV2 AC154305.1-201ENSMUST00000224443 450 ntBASIC4.42□□□□□ -1.7
Herc4Q6PAV2 AC129308.2-201ENSMUST00000224588 789 ntBASIC4.42□□□□□ -1.7
Herc4Q6PAV2 AC166095.1-203ENSMUST00000224591 233 ntBASIC4.42□□□□□ -1.7
Herc4Q6PAV2 AC155167.1-201ENSMUST00000228931 614 ntBASIC4.42□□□□□ -1.7
Herc4Q6PAV2 Olfr1260-201ENSMUST00000061830 933 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Herc4Q6PAV2 Olfr134-201ENSMUST00000074883 939 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Herc4Q6PAV2 Gm23677-201ENSMUST00000083156 104 ntBASIC4.42□□□□□ -1.7
Herc4Q6PAV2 Olfr833-ps1-201ENSMUST00000086493 913 ntBASIC4.42□□□□□ -1.7
Herc4Q6PAV2 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC4.42□□□□□ -1.7
Herc4Q6PAV2 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC4.42□□□□□ -1.7
Herc4Q6PAV2 AC135119.1-201ENSMUST00000227935 3717 ntBASIC4.42□□□□□ -1.7
Herc4Q6PAV2 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Herc4Q6PAV2 Zfp951-201ENSMUST00000089906 1356 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
Herc4Q6PAV2 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
Herc4Q6PAV2 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Herc4Q6PAV2 Olfr1112-202ENSMUST00000216772 1443 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Herc4Q6PAV2 Gm23481-201ENSMUST00000104173 131 ntBASIC4.41□□□□□ -1.7
Herc4Q6PAV2 Gm13268-201ENSMUST00000117485 433 ntBASIC4.41□□□□□ -1.7
Herc4Q6PAV2 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC4.41□□□□□ -1.7
Herc4Q6PAV2 Gm13737-201ENSMUST00000119793 232 ntBASIC4.41□□□□□ -1.7
Herc4Q6PAV2 Gm7363-201ENSMUST00000119883 399 ntBASIC4.41□□□□□ -1.7
Herc4Q6PAV2 Gm13459-201ENSMUST00000121558 646 ntBASIC4.41□□□□□ -1.7
Herc4Q6PAV2 Gm15885-201ENSMUST00000122114 388 ntBASIC4.41□□□□□ -1.7
Herc4Q6PAV2 Gm5924-201ENSMUST00000132554 871 ntBASIC4.41□□□□□ -1.7
Herc4Q6PAV2 Vmn1r160-201ENSMUST00000171745 924 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Herc4Q6PAV2 Mir1264-201ENSMUST00000175381 86 ntBASIC4.41□□□□□ -1.7
Herc4Q6PAV2 Gm22111-201ENSMUST00000178010 79 ntBASIC4.41□□□□□ -1.7
Herc4Q6PAV2 Gm23687-201ENSMUST00000178664 79 ntBASIC4.41□□□□□ -1.7
Herc4Q6PAV2 Gm2056-201ENSMUST00000178852 435 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Herc4Q6PAV2 Gm24566-201ENSMUST00000179286 79 ntBASIC4.41□□□□□ -1.7
Herc4Q6PAV2 Gm23305-201ENSMUST00000179342 79 ntBASIC4.41□□□□□ -1.7
Herc4Q6PAV2 Gm26389-201ENSMUST00000179819 79 ntBASIC4.41□□□□□ -1.7
Herc4Q6PAV2 Gm22130-201ENSMUST00000179979 79 ntBASIC4.41□□□□□ -1.7
Herc4Q6PAV2 Gm22393-201ENSMUST00000180153 79 ntBASIC4.41□□□□□ -1.7
Herc4Q6PAV2 Gm25085-201ENSMUST00000180298 79 ntBASIC4.41□□□□□ -1.7
Herc4Q6PAV2 Gm11394-201ENSMUST00000181421 517 ntBASIC4.41□□□□□ -1.7
Herc4Q6PAV2 Gm3496-201ENSMUST00000188283 745 ntBASIC4.41□□□□□ -1.7
Herc4Q6PAV2 Gm37857-201ENSMUST00000191784 1199 ntBASIC4.41□□□□□ -1.7
Herc4Q6PAV2 Gm38279-201ENSMUST00000194067 1131 ntBASIC4.41□□□□□ -1.7
Herc4Q6PAV2 Gm29747-201ENSMUST00000194764 585 ntBASIC4.41□□□□□ -1.7
Herc4Q6PAV2 Gm44852-201ENSMUST00000207950 369 ntBASIC4.41□□□□□ -1.7
Herc4Q6PAV2 Bc1-ps1-201ENSMUST00000208471 318 ntBASIC4.41□□□□□ -1.7
Herc4Q6PAV2 Gm8679-201ENSMUST00000210651 1036 ntBASIC4.41□□□□□ -1.7
Herc4Q6PAV2 AC154313.1-201ENSMUST00000217755 3841 ntBASIC4.41□□□□□ -1.7
Herc4Q6PAV2 Gm5649-201ENSMUST00000217918 951 ntBASIC4.41□□□□□ -1.7
Herc4Q6PAV2 Gm29774-201ENSMUST00000219270 436 ntBASIC4.41□□□□□ -1.7
Herc4Q6PAV2 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Herc4Q6PAV2 AC153522.1-201ENSMUST00000220047 1090 ntBASIC4.41□□□□□ -1.7
Herc4Q6PAV2 Gm30893-201ENSMUST00000220479 903 ntTSL 5 BASIC4.41□□□□□ -1.7
Herc4Q6PAV2 AC154788.1-201ENSMUST00000225003 340 ntBASIC4.41□□□□□ -1.7
Herc4Q6PAV2 CT025525.3-201ENSMUST00000228858 366 ntBASIC4.41□□□□□ -1.7
Herc4Q6PAV2 Olfr589-201ENSMUST00000061055 954 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Herc4Q6PAV2 Olfr924-201ENSMUST00000072977 927 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Herc4Q6PAV2 Olfr870-201ENSMUST00000086476 936 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Herc4Q6PAV2 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Herc4Q6PAV2 Ptprz1-201ENSMUST00000090568 8068 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
Herc4Q6PAV2 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC4.41□□□□□ -1.7
Herc4Q6PAV2 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Herc4Q6PAV2 Svet1-201ENSMUST00000209370 3940 ntBASIC4.4□□□□□ -1.7
Herc4Q6PAV2 Olfr1458-202ENSMUST00000215160 1914 ntAPPRIS P5 TSL 5 BASIC4.4□□□□□ -1.7
Herc4Q6PAV2 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.7
Herc4Q6PAV2 AC153522.2-201ENSMUST00000218389 3853 ntBASIC4.4□□□□□ -1.7
Herc4Q6PAV2 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Herc4Q6PAV2 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Herc4Q6PAV2 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Herc4Q6PAV2 Gm24935-201ENSMUST00000103770 110 ntBASIC4.4□□□□□ -1.71
Herc4Q6PAV2 Gm23273-201ENSMUST00000104058 135 ntBASIC4.4□□□□□ -1.71
Herc4Q6PAV2 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Herc4Q6PAV2 Gm15061-201ENSMUST00000121076 1046 ntBASIC4.4□□□□□ -1.71
Herc4Q6PAV2 Gm14986-201ENSMUST00000121262 1002 ntBASIC4.4□□□□□ -1.71
Herc4Q6PAV2 Gm11506-201ENSMUST00000122414 470 ntBASIC4.4□□□□□ -1.71
Herc4Q6PAV2 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Herc4Q6PAV2 Gm22378-201ENSMUST00000157481 111 ntBASIC4.4□□□□□ -1.71
Herc4Q6PAV2 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Herc4Q6PAV2 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Herc4Q6PAV2 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC4.4□□□□□ -1.71
Herc4Q6PAV2 Mir6238-201ENSMUST00000184140 129 ntBASIC4.4□□□□□ -1.71
Herc4Q6PAV2 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC4.4□□□□□ -1.71
Herc4Q6PAV2 n-TSaga9-201ENSMUST00000197675 107 ntBASIC4.4□□□□□ -1.71
Herc4Q6PAV2 AC153382.1-201ENSMUST00000217953 1007 ntTSL 5 BASIC4.4□□□□□ -1.71
Herc4Q6PAV2 AC153516.1-201ENSMUST00000217955 779 ntBASIC4.4□□□□□ -1.71
Herc4Q6PAV2 AC167202.1-201ENSMUST00000219027 331 ntBASIC4.4□□□□□ -1.71
Herc4Q6PAV2 AC154816.2-201ENSMUST00000221918 372 ntTSL 5 BASIC4.4□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms